RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 GANCQ8TET4 914 aa14.34□□□□□ -0.11
PMS1-221ENST00000624204 TEFMQ96QE5 360 aaKnown RBP14.34□□□□□ -0.11
PMS1-221ENST00000624204 SECISBP2Q96T21 854 aaKnown RBP14.34□□□□□ -0.11
PMS1-221ENST00000624204 POLDIP3Q9BY77 421 aaKnown RBP14.34□□□□□ -0.11
PMS1-221ENST00000624204 MYO16Q9Y6X6 1858 aa14.34□□□□□ -0.11
PMS1-221ENST00000624204 OR2AG2A6NM03 316 aa14.34□□□□□ -0.11
PMS1-221ENST00000624204 M0QZQ0 153 aa14.34□□□□□ -0.11
PMS1-221ENST00000624204 FAAHO00519 579 aa14.34□□□□□ -0.11
PMS1-221ENST00000624204 FZD6O60353 706 aa14.34□□□□□ -0.11
PMS1-221ENST00000624204 TGFB1P01137 390 aa14.34□□□□□ -0.11
PMS1-221ENST00000624204 SLC6A12P48065 614 aa14.34□□□□□ -0.11
PMS1-221ENST00000624204 CDH4P55283 916 aa14.34□□□□□ -0.11
PMS1-221ENST00000624204 MAZP56270 477 aaKnown RBP14.34□□□□□ -0.11
PMS1-221ENST00000624204 ARF5P84085 180 aa14.34□□□□□ -0.11
PMS1-221ENST00000624204 TCTE1Q5JU00 501 aa14.34□□□□□ -0.11
PMS1-221ENST00000624204 SPRYD7Q5W111 196 aa14.34□□□□□ -0.11
PMS1-221ENST00000624204 TSPAN33Q86UF1 283 aa14.34□□□□□ -0.11
PMS1-221ENST00000624204 IQCHQ86VS3 1027 aa14.34□□□□□ -0.11
PMS1-221ENST00000624204 SIAH3Q8IW03 269 aa14.34□□□□□ -0.11
PMS1-221ENST00000624204 PTP4A1Q93096 173 aa14.34□□□□□ -0.11
PMS1-221ENST00000624204 WFDC6Q9BQY6 131 aa14.34□□□□□ -0.11
PMS1-221ENST00000624204 ARHGAP9Q9BRR9 750 aa14.34□□□□□ -0.11
PMS1-221ENST00000624204 SLC12A9Q9BXP2 914 aa14.34□□□□□ -0.11
PMS1-221ENST00000624204 EGLN3Q9H6Z9 239 aa14.34□□□□□ -0.11
PMS1-221ENST00000624204 MBD1Q9UIS9 605 aaPredicted RBP14.34□□□□□ -0.11
PMS1-221ENST00000624204 FBXL2Q9UKC9 423 aa14.34□□□□□ -0.11
PMS1-221ENST00000624204 PLXNB2O15031 1838 aa14.33□□□□□ -0.12
PMS1-221ENST00000624204 MEIKINA0A087WXM9 373 aa14.33□□□□□ -0.12
PMS1-221ENST00000624204 TMEM129A0AVI4 362 aa14.33□□□□□ -0.12
PMS1-221ENST00000624204 L7N2F9 121 aa14.33□□□□□ -0.12
PMS1-221ENST00000624204 SRPRAP08240 638 aaKnown RBP14.33□□□□□ -0.12
PMS1-221ENST00000624204 ACP2P11117 423 aa14.33□□□□□ -0.12
PMS1-221ENST00000624204 F8A1P23610 371 aa14.33□□□□□ -0.12
PMS1-221ENST00000624204 PRKAG1P54619 331 aa14.33□□□□□ -0.12
PMS1-221ENST00000624204 SFRP4Q6FHJ7 346 aaPredicted RBP14.33□□□□□ -0.12
PMS1-221ENST00000624204 REEP3Q6NUK4 255 aa14.33□□□□□ -0.12
PMS1-221ENST00000624204 SLAIN1Q8ND83 568 aa14.33□□□□□ -0.12
PMS1-221ENST00000624204 OR5M3Q8NGP4 307 aa14.33□□□□□ -0.12
PMS1-221ENST00000624204 HGDQ93099 445 aa14.33□□□□□ -0.12
PMS1-221ENST00000624204 RADILQ96JH8 1075 aa14.33□□□□□ -0.12
PMS1-221ENST00000624204 FBXW2Q9UKT8 454 aa14.33□□□□□ -0.12
PMS1-221ENST00000624204 RASD1Q9Y272 281 aa14.33□□□□□ -0.12
PMS1-221ENST00000624204 ARRDC5A6NEK1 342 aa14.33□□□□□ -0.12
PMS1-221ENST00000624204 PRR23D1E9PI22 279 aaPredicted RBP14.33□□□□□ -0.12
PMS1-221ENST00000624204 H0YC42 278 aa14.33□□□□□ -0.12
PMS1-221ENST00000624204 SYN3O14994 580 aa14.33□□□□□ -0.12
PMS1-221ENST00000624204 HYAL3O43820 417 aaPredicted RBP14.33□□□□□ -0.12
PMS1-221ENST00000624204 CELF2O95319 508 aaKnown RBP14.33□□□□□ -0.12
PMS1-221ENST00000624204 HPXP02790 462 aa14.33□□□□□ -0.12
PMS1-221ENST00000624204 PRR23D2P0DMB1 279 aaPredicted RBP14.33□□□□□ -0.12
PMS1-221ENST00000624204 ARAFP10398 606 aa14.33□□□□□ -0.12
PMS1-221ENST00000624204 CD52P31358 61 aa14.33□□□□□ -0.12
PMS1-221ENST00000624204 SLC11A2P49281 568 aa14.33□□□□□ -0.12
PMS1-221ENST00000624204 PFN3P60673 137 aa14.33□□□□□ -0.12
PMS1-221ENST00000624204 DEFA5Q01523 94 aa14.33□□□□□ -0.12
PMS1-221ENST00000624204 ZNF613Q6PF04 617 aa14.33□□□□□ -0.12
PMS1-221ENST00000624204 SYT9Q86SS6 491 aa14.33□□□□□ -0.12
PMS1-221ENST00000624204 LRRC28Q86X40 367 aaPredicted RBP14.33□□□□□ -0.12
PMS1-221ENST00000624204 RPLP0P6Q8NHW5 317 aa14.33□□□□□ -0.12
PMS1-221ENST00000624204 ADAMTS19Q8TE59 1207 aa14.33□□□□□ -0.12
PMS1-221ENST00000624204 SLC16A10Q8TF71 515 aa14.33□□□□□ -0.12
PMS1-221ENST00000624204 USB1Q9BQ65 265 aaKnown RBP14.33□□□□□ -0.12
PMS1-221ENST00000624204 YIPF4Q9BSR8 244 aa14.33□□□□□ -0.12
PMS1-221ENST00000624204 SYT17Q9BSW7 474 aa14.33□□□□□ -0.12
PMS1-221ENST00000624204 ZNF436Q9C0F3 470 aaPredicted RBP14.33□□□□□ -0.12
PMS1-221ENST00000624204 TMEM38AQ9H6F2 299 aa14.33□□□□□ -0.12
PMS1-221ENST00000624204 REEP4Q9H6H4 257 aa14.33□□□□□ -0.12
PMS1-221ENST00000624204 DNAH14Q0VDD8 3507 aa14.33□□□□□ -0.12
PMS1-221ENST00000624204 PTPRDP23468 1912 aa14.33□□□□□ -0.12
PMS1-221ENST00000624204 A0A0B4J203 849 aa14.32□□□□□ -0.12
PMS1-221ENST00000624204 URODP06132 367 aa14.32□□□□□ -0.12
PMS1-221ENST00000624204 TIA1P31483 386 aaKnown RBP eCLIP14.32□□□□□ -0.12
PMS1-221ENST00000624204 NSG1P42857 185 aa14.32□□□□□ -0.12
PMS1-221ENST00000624204 SLC1A3P43003 542 aa14.32□□□□□ -0.12
PMS1-221ENST00000624204 HNMTP50135 292 aa14.32□□□□□ -0.12
PMS1-221ENST00000624204 RAB40BQ12829 278 aa14.32□□□□□ -0.12
PMS1-221ENST00000624204 TUSC3Q13454 348 aa14.32□□□□□ -0.12
PMS1-221ENST00000624204 RNLSQ5VYX0 342 aa14.32□□□□□ -0.12
PMS1-221ENST00000624204 SERPINA13PQ6UXR4 307 aa14.32□□□□□ -0.12
PMS1-221ENST00000624204 LRRTM4Q86VH4 590 aa14.32□□□□□ -0.12
PMS1-221ENST00000624204 NR2C2APQ86WQ0 139 aa14.32□□□□□ -0.12
PMS1-221ENST00000624204 SLC5A11Q8WWX8 675 aa14.32□□□□□ -0.12
PMS1-221ENST00000624204 SUSD3Q96L08 255 aa14.32□□□□□ -0.12
PMS1-221ENST00000624204 ZNF304Q9HCX3 659 aa14.32□□□□□ -0.12
PMS1-221ENST00000624204 CD93Q9NPY3 652 aa14.32□□□□□ -0.12
PMS1-221ENST00000624204 KDM4FA0A1W2PPD8 638 aa14.32□□□□□ -0.12
PMS1-221ENST00000624204 MFSD2BA6NFX1 497 aa14.32□□□□□ -0.12
PMS1-221ENST00000624204 PDCD5O14737 125 aa14.32□□□□□ -0.12
PMS1-221ENST00000624204 PRODHO43272 600 aa14.32□□□□□ -0.12
PMS1-221ENST00000624204 STATHP02808 62 aa14.32□□□□□ -0.12
PMS1-221ENST00000624204 LPLP06858 475 aa14.32□□□□□ -0.12
PMS1-221ENST00000624204 PCSK2P16519 638 aa14.32□□□□□ -0.12
PMS1-221ENST00000624204 MMP11P24347 488 aa14.32□□□□□ -0.12
PMS1-221ENST00000624204 MMP12P39900 470 aa14.32□□□□□ -0.12
PMS1-221ENST00000624204 GSG1Q2KHT4 349 aa14.32□□□□□ -0.12
PMS1-221ENST00000624204 HYAL4Q2M3T9 481 aa14.32□□□□□ -0.12
PMS1-221ENST00000624204 SFRP5Q5T4F7 317 aa14.32□□□□□ -0.12
PMS1-221ENST00000624204 PODNL1Q6PEZ8 512 aa14.32□□□□□ -0.12
PMS1-221ENST00000624204 ATRAIDQ6UW56 229 aa14.32□□□□□ -0.12
PMS1-221ENST00000624204 NLRC3Q7RTR2 1065 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms