RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 RGS13O14921 159 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 PLD2O14939 933 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 MID1O15344 667 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 ERI3O43414 337 aaKnown RBP9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 KLF4O43474 513 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 PCDH8O95206 1070 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 ADH1BP00325 375 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 ALPPP05187 535 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 SERPIND1P05546 499 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 TSPAN19P0C672 248 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 MSL3P1P0C860 447 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 GSTT2P0CG29 244 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 GSTT2BP0CG30 244 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 IL7P13232 177 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 ACP5P13686 325 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 MYL12AP19105 171 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 C5AR1P21730 350 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 FCARP24071 287 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 PRKAR1BP31321 381 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 BUD31P41223 144 aaPredicted RBP9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 MAGEA10P43363 369 aaPredicted RBP9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 OMPP47874 163 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 RFX2P48378 723 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 PRR5P85299 388 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 ACSM1Q08AH1 577 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 ST3GAL3Q11203 375 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 FGL2Q14314 439 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 CST6Q15828 149 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 NDUFA5Q16718 116 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 GPAT3Q53EU6 434 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 C2orf27AQ580R0 203 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 ATAT1Q5SQI0 421 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 LIPKQ5VXJ0 399 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 ZNF425Q6IV72 752 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 SLC27A4Q6P1M0 643 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 WASH2PQ6VEQ5 465 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 OLIG3Q7RTU3 272 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 ADCK2Q7Z695 626 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 NRROSQ86YC3 692 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 RAB43Q86YS6 212 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 LAX1Q8IWV1 398 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 CACTIN-AS1Q8N1I8 211 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 GDPD1Q8N9F7 314 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 TOR1AIP2Q8NFQ8 470 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 OR52E1Q8NGJ3 308 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 OR8D4Q8NGM9 314 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 OR8K5Q8NH50 307 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 PIGXQ8TBF5 258 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 ERLEC1Q96DZ1 483 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 C16orf58Q96GQ5 468 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 ZNF486Q96H40 463 aaPredicted RBP9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 KCTD7Q96MP8 289 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 SLC38A2Q96QD8 506 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 COQ7Q99807 217 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 JAM3Q9BX67 310 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 C1QTNF2Q9BXJ5 285 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 PLA2G12AQ9BZM1 189 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 KIR3DX1Q9H7L2 352 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 TRIM45Q9H8W5 580 aaPredicted RBP9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 SEMA4GQ9NTN9 838 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 GIMAP4Q9NUV9 329 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 MED17Q9NVC6 651 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 C14orf119Q9NWQ9 140 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 PRKAG2Q9UGJ0 569 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 APOBEC3BQ9UH17 382 aaKnown RBP9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 SNX7Q9UNH6 387 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 ZFR2Q9UPR6 939 aaKnown RBP9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 EXOGQ9Y2C4 368 aaKnown RBP9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 SLC17A4Q9Y2C5 497 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 SPIN1Q9Y657 262 aaPredicted RBP9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 KCNE3Q9Y6H6 103 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 STON1Q9Y6Q2 735 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 CKAP5Q14008 2032 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 TRPM6Q9BX84 2022 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 HMX3A6NHT5 357 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 WASHC1A8K0Z3 465 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 SLC30A4O14863 429 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 RGS5O15539 181 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 PROM1O43490 865 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 SSX4O60224 188 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 PRKRAO75569 313 aaKnown RBP9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 ERAL1O75616 437 aaKnown RBP9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 CCNKO75909 580 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 OR5F1O95221 314 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 CEACAM5P06731 702 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 CLEC2LP0C7M8 214 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 LIMS3P0CW19 117 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 LIMS4P0CW20 117 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 FPR3P25089 353 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 PTBP1P26599 531 aaKnown RBP eCLIP9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 CMPK1P30085 196 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 PEBP1P30086 187 aaKnown RBP9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 GABRA5P31644 462 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 IFNA8P32881 189 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 MPIP34949 423 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 DDOSTP39656 456 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 HTR3AP46098 478 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 MTNR1AP48039 350 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 PRKAG1P54619 331 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms