RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 DESI1Q6ICB0 168 aa13.19□□□□□ -0.3
CBWD3-217ENST00000621474 OPN5Q6U736 354 aa13.19□□□□□ -0.3
CBWD3-217ENST00000621474 GALNTL5Q7Z4T8 443 aa13.19□□□□□ -0.3
CBWD3-217ENST00000621474 GPALPP1Q8IXQ4 340 aa13.19□□□□□ -0.3
CBWD3-217ENST00000621474 GLB1L3Q8NCI6 653 aaPredicted RBP13.19□□□□□ -0.3
CBWD3-217ENST00000621474 PSD4Q8NDX1 1056 aa13.19□□□□□ -0.3
CBWD3-217ENST00000621474 NUP43Q8NFH3 380 aa13.19□□□□□ -0.3
CBWD3-217ENST00000621474 OR4N2Q8NGD1 307 aa13.19□□□□□ -0.3
CBWD3-217ENST00000621474 SNRNP40Q96DI7 357 aaKnown RBP13.19□□□□□ -0.3
CBWD3-217ENST00000621474 BARD1Q99728 777 aaKnown RBP13.19□□□□□ -0.3
CBWD3-217ENST00000621474 LMF2Q9BU23 707 aaKnown RBP13.19□□□□□ -0.3
CBWD3-217ENST00000621474 TMEM120AQ9BXJ8 343 aa13.19□□□□□ -0.3
CBWD3-217ENST00000621474 NEUROD4Q9HD90 331 aa13.19□□□□□ -0.3
CBWD3-217ENST00000621474 KLHL1Q9NR64 748 aa13.19□□□□□ -0.3
CBWD3-217ENST00000621474 DEPPQ9NTK1 212 aa13.19□□□□□ -0.3
CBWD3-217ENST00000621474 NPFFR2Q9Y5X5 522 aa13.19□□□□□ -0.3
CBWD3-217ENST00000621474 CHCHD2Q9Y6H1 151 aaPredicted RBP13.19□□□□□ -0.3
CBWD3-217ENST00000621474 NCKAP5O14513 1909 aa13.18□□□□□ -0.3
CBWD3-217ENST00000621474 PRSS51A0A1B0GVH4 220 aa13.18□□□□□ -0.3
CBWD3-217ENST00000621474 ACOX3O15254 700 aa13.18□□□□□ -0.3
CBWD3-217ENST00000621474 EMC8O43402 210 aa13.18□□□□□ -0.3
CBWD3-217ENST00000621474 C1QCP02747 245 aa13.18□□□□□ -0.3
CBWD3-217ENST00000621474 CCL3P10147 92 aa13.18□□□□□ -0.3
CBWD3-217ENST00000621474 DCAF7P61962 342 aa13.18□□□□□ -0.3
CBWD3-217ENST00000621474 SF3A3Q12874 501 aaKnown RBP eCLIP13.18□□□□□ -0.3
CBWD3-217ENST00000621474 RPS6KA2Q15349 733 aa13.18□□□□□ -0.3
CBWD3-217ENST00000621474 SLC25A25Q6KCM7 469 aa13.18□□□□□ -0.3
CBWD3-217ENST00000621474 CLEC4FQ8N1N0 589 aa13.18□□□□□ -0.3
CBWD3-217ENST00000621474 MIER2Q8N344 545 aa13.18□□□□□ -0.3
CBWD3-217ENST00000621474 GOLM1Q8NBJ4 401 aa13.18□□□□□ -0.3
CBWD3-217ENST00000621474 OR10G3Q8NGC4 313 aa13.18□□□□□ -0.3
CBWD3-217ENST00000621474 OR5AK3PQ8NH89 298 aa13.18□□□□□ -0.3
CBWD3-217ENST00000621474 HSPBAP1Q96EW2 488 aa13.18□□□□□ -0.3
CBWD3-217ENST00000621474 MS4A4EQ96PG1 132 aa13.18□□□□□ -0.3
CBWD3-217ENST00000621474 SLC52A3Q9NQ40 469 aa13.18□□□□□ -0.3
CBWD3-217ENST00000621474 EQTNQ9NQ60 294 aa13.18□□□□□ -0.3
CBWD3-217ENST00000621474 SERHLQ9NQF3 203 aa13.18□□□□□ -0.3
CBWD3-217ENST00000621474 GPATCH2Q9NW75 528 aa13.18□□□□□ -0.3
CBWD3-217ENST00000621474 FAM120CQ9NX05 1096 aaKnown RBP13.18□□□□□ -0.3
CBWD3-217ENST00000621474 A0A0G2JMM0 328 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 A0A1W2PPB8 328 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 A0A1W2PRS3 328 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 KIR3DP1A8MWS1 328 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 HMGN2P05204 90 aaKnown RBP13.17□□□□□ -0.3
CBWD3-217ENST00000621474 S100A3P33764 101 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 PRKAG1P54619 331 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 FBXW4P57775 412 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 PMP22Q01453 160 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 C19orf57Q0VDD7 668 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 ZNF155Q12901 538 aaPredicted RBP13.17□□□□□ -0.3
CBWD3-217ENST00000621474 GAB1Q13480 694 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 RCAN2Q14206 197 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 INPP5JQ15735 1006 aaPredicted RBP13.17□□□□□ -0.3
CBWD3-217ENST00000621474 MAPKAPK3Q16644 382 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 MFSD12Q6NUT3 480 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 RTL4Q6ZR62 310 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 PRICKLE2Q7Z3G6 844 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 TAGAPQ8N103 731 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 CISD2Q8N5K1 135 aaKnown RBP13.17□□□□□ -0.3
CBWD3-217ENST00000621474 HORMAD2Q8N7B1 307 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 GOT1L1Q8NHS2 421 aaPredicted RBP13.17□□□□□ -0.3
CBWD3-217ENST00000621474 PAQR8Q8TEZ7 354 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 C16orf58Q96GQ5 468 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 SGCZQ96LD1 299 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 CCDC115Q96NT0 180 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 PROK2Q9HC23 129 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 SLC6A13Q9NSD5 602 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 ZCCHC3Q9NUD5 404 aaKnown RBP13.17□□□□□ -0.3
CBWD3-217ENST00000621474 BTNL2Q9UIR0 455 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 SNX8Q9Y5X2 465 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 ZGRF1Q86YA3 2104 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 PINLYPA6NC86 204 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 ASPDHA6ND91 283 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 TTLL8A6PVC2 850 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 CFLARO15519 480 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 WISP2O76076 250 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 IL6P05231 212 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 TROVE2P10155 538 aaKnown RBP eCLIP13.17□□□□□ -0.3
CBWD3-217ENST00000621474 ACP2P11117 423 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 CD46P15529 392 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 CDKN2CP42773 168 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 CCT3P49368 545 aaKnown RBP13.17□□□□□ -0.3
CBWD3-217ENST00000621474 ATP4BP51164 291 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 POLR2JP52435 117 aaKnown RBP13.17□□□□□ -0.3
CBWD3-217ENST00000621474 SEC24CP53992 1094 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 GPR85P60893 370 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 TLE1Q04724 770 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 INAQ16352 499 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 ANXA8L1Q5VT79 327 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 SZRD1Q7Z422 152 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 SLC44A2Q8IWA5 706 aaPredicted RBP13.17□□□□□ -0.3
CBWD3-217ENST00000621474 SULF2Q8IWU5 870 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 SLC16A11Q8NCK7 471 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 FBXO30Q8TB52 745 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 C10orf82Q8WW14 230 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 TMBIM1Q969X1 311 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 VPS33AQ96AX1 596 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 NTNG2Q96CW9 530 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 OMA1Q96E52 524 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 CHMP6Q96FZ7 201 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms