RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 GALNT9Q9HCQ5 603 aa15.69■□□□□ 0.1
HMGN3-203ENST00000620514 GPR55Q9Y2T6 319 aaPredicted RBP15.69■□□□□ 0.1
HMGN3-203ENST00000620514 SLC6A5Q9Y345 797 aa15.69■□□□□ 0.1
HMGN3-203ENST00000620514 POLR3HQ9Y535 204 aaPredicted RBP15.69■□□□□ 0.1
HMGN3-203ENST00000620514 PTGDR2Q9Y5Y4 395 aa15.69■□□□□ 0.1
HMGN3-203ENST00000620514 HCFC1P51610 2035 aa15.68■□□□□ 0.1
HMGN3-203ENST00000620514 TLDC2A0PJX2 215 aa15.68■□□□□ 0.1
HMGN3-203ENST00000620514 FRG2CA6NGY1 282 aa15.68■□□□□ 0.1
HMGN3-203ENST00000620514 TO15178 435 aa15.68■□□□□ 0.1
HMGN3-203ENST00000620514 ICOSLGO75144 302 aa15.68■□□□□ 0.1
HMGN3-203ENST00000620514 CDH16O75309 829 aa15.68■□□□□ 0.1
HMGN3-203ENST00000620514 CRCPO75575 148 aa15.68■□□□□ 0.1
HMGN3-203ENST00000620514 GABRA1P14867 456 aa15.68■□□□□ 0.1
HMGN3-203ENST00000620514 PTPN6P29350 595 aa15.68■□□□□ 0.1
HMGN3-203ENST00000620514 SSTR2P30874 369 aa15.68■□□□□ 0.1
HMGN3-203ENST00000620514 ZFP36L2P47974 494 aaKnown RBP15.68■□□□□ 0.1
HMGN3-203ENST00000620514 CORO7P57737 925 aa15.68■□□□□ 0.1
HMGN3-203ENST00000620514 DCAF7P61962 342 aa15.68■□□□□ 0.1
HMGN3-203ENST00000620514 SLC18A2Q05940 514 aa15.68■□□□□ 0.1
HMGN3-203ENST00000620514 ZNF763Q0D2J5 394 aa15.68■□□□□ 0.1
HMGN3-203ENST00000620514 TOMM20Q15388 145 aa15.68■□□□□ 0.1
HMGN3-203ENST00000620514 CEBPEQ15744 281 aa15.68■□□□□ 0.1
HMGN3-203ENST00000620514 TIGD3Q6B0B8 471 aa15.68■□□□□ 0.1
HMGN3-203ENST00000620514 CLEC6AQ6EIG7 209 aa15.68■□□□□ 0.1
HMGN3-203ENST00000620514 FAM71E1Q6IPT2 247 aa15.68■□□□□ 0.1
HMGN3-203ENST00000620514 NPSR1Q6W5P4 371 aa15.68■□□□□ 0.1
HMGN3-203ENST00000620514 SEM1Q6ZVN7 128 aa15.68■□□□□ 0.1
HMGN3-203ENST00000620514 TRIM46Q7Z4K8 759 aa15.68■□□□□ 0.1
HMGN3-203ENST00000620514 C10orf107Q8IVU9 208 aa15.68■□□□□ 0.1
HMGN3-203ENST00000620514 FAM9CQ8IZT9 166 aa15.68■□□□□ 0.1
HMGN3-203ENST00000620514 OR7G2Q8NG99 324 aa15.68■□□□□ 0.1
HMGN3-203ENST00000620514 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.68■□□□□ 0.1
HMGN3-203ENST00000620514 TIMP4Q99727 224 aa15.68■□□□□ 0.1
HMGN3-203ENST00000620514 OSBPL11Q9BXB4 747 aa15.68■□□□□ 0.1
HMGN3-203ENST00000620514 GIMAP4Q9NUV9 329 aa15.68■□□□□ 0.1
HMGN3-203ENST00000620514 EXO1Q9UQ84 846 aaKnown RBP15.68■□□□□ 0.1
HMGN3-203ENST00000620514 CCL27Q9Y4X3 112 aa15.68■□□□□ 0.1
HMGN3-203ENST00000620514 ADGRG4Q8IZF6 3080 aa15.67■□□□□ 0.1
HMGN3-203ENST00000620514 DCHS2Q6V1P9 2916 aa15.67■□□□□ 0.1
HMGN3-203ENST00000620514 PDZD2O15018 2839 aa15.67■□□□□ 0.1
HMGN3-203ENST00000620514 REM1O75628 298 aa15.67■□□□□ 0.1
HMGN3-203ENST00000620514 BCAS2O75934 225 aaPredicted RBP15.67■□□□□ 0.1
HMGN3-203ENST00000620514 HOXD4P09016 255 aaPredicted RBP15.67■□□□□ 0.1
HMGN3-203ENST00000620514 CT45A8P0DMV1 189 aa15.67■□□□□ 0.1
HMGN3-203ENST00000620514 CT45A9P0DMV2 189 aa15.67■□□□□ 0.1
HMGN3-203ENST00000620514 DDCP20711 480 aa15.67■□□□□ 0.1
HMGN3-203ENST00000620514 MSX1P28360 303 aa15.67■□□□□ 0.1
HMGN3-203ENST00000620514 WNT3P56703 355 aa15.67■□□□□ 0.1
HMGN3-203ENST00000620514 NAA20P61599 178 aa15.67■□□□□ 0.1
HMGN3-203ENST00000620514 PCLAFQ15004 111 aa15.67■□□□□ 0.1
HMGN3-203ENST00000620514 CT45A2Q5DJT8 189 aa15.67■□□□□ 0.1
HMGN3-203ENST00000620514 WIPI1Q5MNZ9 446 aaPredicted RBP15.67■□□□□ 0.1
HMGN3-203ENST00000620514 DCST1Q5T197 706 aa15.67■□□□□ 0.1
HMGN3-203ENST00000620514 LIPMQ5VYY2 423 aa15.67■□□□□ 0.1
HMGN3-203ENST00000620514 SLC30A6Q6NXT4 461 aa15.67■□□□□ 0.1
HMGN3-203ENST00000620514 TMEM81Q6P7N7 255 aa15.67■□□□□ 0.1
HMGN3-203ENST00000620514 YRDCQ86U90 279 aaKnown RBP15.67■□□□□ 0.1
HMGN3-203ENST00000620514 SAMD14Q8IZD0 417 aaPredicted RBP15.67■□□□□ 0.1
HMGN3-203ENST00000620514 OR1J4Q8NGS1 313 aa15.67■□□□□ 0.1
HMGN3-203ENST00000620514 ERP27Q96DN0 273 aa15.67■□□□□ 0.1
HMGN3-203ENST00000620514 C14orf79Q96F83 325 aa15.67■□□□□ 0.1
HMGN3-203ENST00000620514 VSTM2LQ96N03 204 aa15.67■□□□□ 0.1
HMGN3-203ENST00000620514 BTBD9Q96Q07 612 aa15.67■□□□□ 0.1
HMGN3-203ENST00000620514 BBS4Q96RK4 519 aa15.67■□□□□ 0.1
HMGN3-203ENST00000620514 GATA5Q9BWX5 397 aaPredicted RBP15.67■□□□□ 0.1
HMGN3-203ENST00000620514 FOLH1BQ9HBA9 442 aa15.67■□□□□ 0.1
HMGN3-203ENST00000620514 KLRF1Q9NZS2 232 aa15.67■□□□□ 0.1
HMGN3-203ENST00000620514 MAPRE3Q9UPY8 281 aa15.67■□□□□ 0.1
HMGN3-203ENST00000620514 INTS1Q8N201 2190 aaKnown RBP15.67■□□□□ 0.1
HMGN3-203ENST00000620514 PRAMEF25A6NGN4 478 aa15.66■□□□□ 0.1
HMGN3-203ENST00000620514 MYO1GB0I1T2 1018 aa15.66■□□□□ 0.1
HMGN3-203ENST00000620514 H3BQF6 201 aa15.66■□□□□ 0.1
HMGN3-203ENST00000620514 SNPHO15079 494 aa15.66■□□□□ 0.1
HMGN3-203ENST00000620514 PLOD3O60568 738 aa15.66■□□□□ 0.1
HMGN3-203ENST00000620514 ERN1O75460 977 aaKnown RBP15.66■□□□□ 0.1
HMGN3-203ENST00000620514 RSL1D1O76021 490 aaKnown RBP15.66■□□□□ 0.1
HMGN3-203ENST00000620514 JUNP05412 331 aaKnown RBP15.66■□□□□ 0.1
HMGN3-203ENST00000620514 UROSP10746 265 aa15.66■□□□□ 0.1
HMGN3-203ENST00000620514 ELAVL4P26378 380 aaKnown RBP15.66■□□□□ 0.1
HMGN3-203ENST00000620514 MPIP34949 423 aa15.66■□□□□ 0.1
HMGN3-203ENST00000620514 GSTM5P46439 218 aa15.66■□□□□ 0.1
HMGN3-203ENST00000620514 VSNL1P62760 191 aa15.66■□□□□ 0.1
HMGN3-203ENST00000620514 TLE4Q04727 773 aa15.66■□□□□ 0.1
HMGN3-203ENST00000620514 ERCC6LQ2NKX8 1250 aa15.66■□□□□ 0.1
HMGN3-203ENST00000620514 ACSF3Q4G176 576 aaPredicted RBP15.66■□□□□ 0.1
HMGN3-203ENST00000620514 RIPPLY2Q5TAB7 128 aa15.66■□□□□ 0.1
HMGN3-203ENST00000620514 VASNQ6EMK4 673 aa15.66■□□□□ 0.1
HMGN3-203ENST00000620514 NOXRED1Q6NXP6 359 aa15.66■□□□□ 0.1
HMGN3-203ENST00000620514 FAM83FQ8NEG4 500 aaPredicted RBP15.66■□□□□ 0.1
HMGN3-203ENST00000620514 OR4N2Q8NGD1 307 aa15.66■□□□□ 0.1
HMGN3-203ENST00000620514 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.66■□□□□ 0.1
HMGN3-203ENST00000620514 COL21A1Q96P44 957 aa15.66■□□□□ 0.1
HMGN3-203ENST00000620514 ADOQ96SZ5 270 aa15.66■□□□□ 0.1
HMGN3-203ENST00000620514 UGT2B28Q9BY64 529 aa15.66■□□□□ 0.1
HMGN3-203ENST00000620514 MYNNQ9NPC7 610 aa15.66■□□□□ 0.1
HMGN3-203ENST00000620514 SERHLQ9NQF3 203 aa15.66■□□□□ 0.1
HMGN3-203ENST00000620514 RRAGDQ9NQL2 400 aaPredicted RBP15.66■□□□□ 0.1
HMGN3-203ENST00000620514 SENP1Q9P0U3 644 aa15.66■□□□□ 0.1
HMGN3-203ENST00000620514 FIS1Q9Y3D6 152 aa15.66■□□□□ 0.1
HMGN3-203ENST00000620514 PCDHGB3Q9Y5G1 929 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms