RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 EBF3Q9H4W6 596 aa3.84□□□□□ -1.8
UBE2D3-233ENST00000618836 ZNF430Q9H8G1 570 aaPredicted RBP3.84□□□□□ -1.8
UBE2D3-233ENST00000618836 GPN2Q9H9Y4 310 aaPredicted RBP3.84□□□□□ -1.8
UBE2D3-233ENST00000618836 UGT1A7Q9HAW7 530 aa3.84□□□□□ -1.8
UBE2D3-233ENST00000618836 BCO1Q9HAY6 547 aa3.84□□□□□ -1.8
UBE2D3-233ENST00000618836 ZNF160Q9HCG1 818 aa3.84□□□□□ -1.8
UBE2D3-233ENST00000618836 SERHLQ9NQF3 203 aa3.84□□□□□ -1.8
UBE2D3-233ENST00000618836 SACM1LQ9NTJ5 587 aa3.84□□□□□ -1.8
UBE2D3-233ENST00000618836 ERVK13-1Q9NX77 482 aa3.84□□□□□ -1.8
UBE2D3-233ENST00000618836 STOML1Q9UBI4 398 aa3.84□□□□□ -1.8
UBE2D3-233ENST00000618836 MRM2Q9UI43 246 aaKnown RBP3.84□□□□□ -1.8
UBE2D3-233ENST00000618836 KLHL21Q9UJP4 597 aa3.84□□□□□ -1.8
UBE2D3-233ENST00000618836 HSPE1-MOB4S4R3N1 261 aa3.84□□□□□ -1.8
UBE2D3-233ENST00000618836 CHD5Q8TDI0 1954 aa3.84□□□□□ -1.8
UBE2D3-233ENST00000618836 A0A1W2PP64 1363 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 MBLAC1A4D2B0 266 aaPredicted RBP3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 TBC1D3FA6NER0 549 aaPredicted RBP3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 CYSRT1A8MQ03 144 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 NPIPA7E9PJI5 369 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 H3BMM5 538 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 TRIM24O15164 1050 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 B4GALT5O43286 388 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 DYRK3O43781 588 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 DUX1O43812 170 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 CSO75390 466 aaKnown RBP3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 BANF1O75531 89 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 CHRNGP07510 517 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 ACSM4P0C7M7 580 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 NPIPA8P0DM63 369 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 KCNE1P15382 129 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 PTPRAP18433 802 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 NR1D1P20393 614 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 GABRR1P24046 479 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 MAGEA3P43357 314 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 CTBSQ01459 385 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 SCAPQ12770 1279 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 ARL6IP1Q15041 203 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 C3orf38Q5JPI3 329 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 C9orf64Q5T6V5 341 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 PROSER1Q86XN7 944 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 GTPBP8Q8N3Z3 284 aaPredicted RBP3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 STX19Q8N4C7 294 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 RNF148Q8N7C7 305 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 CDYL2Q8N8U2 506 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 OSTF1Q92882 214 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 CLPTM1LQ96KA5 538 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 SENP8Q96LD8 212 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 DUX5Q96PT3 197 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 CRAMP1Q96RY5 1269 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 MAP3K3Q99759 626 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 DPH2Q9BQC3 489 aaPredicted RBP3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 MED10Q9BTT4 135 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 TRMT61BQ9BVS5 477 aaKnown RBP3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 GTPBP2Q9BX10 602 aaKnown RBP3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 KRCC1Q9NPI7 259 aaPredicted RBP3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 MRPL22Q9NWU5 206 aaKnown RBP3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 RDH8Q9NYR8 311 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 CNOT2Q9NZN8 540 aaKnown RBP3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 CRIM1Q9NZV1 1036 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 MLXQ9UH92 298 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 ERRFI1Q9UJM3 462 aaPredicted RBP3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 AJAP1Q9UKB5 411 aaPredicted RBP3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 EXOGQ9Y2C4 368 aaKnown RBP3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 MAP3K2Q9Y2U5 619 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 PKP3Q9Y446 797 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 CAPN6Q9Y6Q1 641 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 URGCP-MRPS24S4R325 110 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 C5orf52A6NGY3 159 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 NPIPB13A6NJU9 1138 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 NPIPB4C9JG80 1138 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 EEF2KO00418 725 aaKnown RBP3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 KPNA3O00505 521 aaPredicted RBP3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 INPP4BO15327 924 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 SIGLEC6O43699 453 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 TXNDC12O95881 172 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 MOCS2O96007 188 aaPredicted RBP3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 TATP17735 454 aaPredicted RBP3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 UGT1A4P22310 534 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 ATP5A1P25705 553 aaKnown RBP3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 PAX6P26367 422 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 TIA1P31483 386 aaKnown RBP eCLIP3.83□□□□□ -1.87e-7■■■□□ 16.1
UBE2D3-233ENST00000618836 PXNP49023 591 aaPredicted RBP3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 CYB561P49447 251 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 COMPP49747 757 aaPredicted RBP3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 RAB28P51157 221 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 PLA2G16P53816 162 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 PUDPQ08623 228 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 PDIA2Q13087 525 aaKnown RBP3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 EFNB3Q15768 340 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 FAM214AQ32MH5 1076 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 AKIRIN2Q53H80 203 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 PABPC1L2AQ5JQF8 200 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 WASHC2DQ5SRD0 308 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 HP1BP3Q5SSJ5 553 aaPredicted RBP3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 ZNF618Q5T7W0 954 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 IER5Q5VY09 327 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 ULK3Q6PHR2 472 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 LRFN4Q6PJG9 635 aa3.83□□□□□ -1.8
UBE2D3-233ENST00000618836 ZNF562Q6V9R5 426 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms