RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 PROX1Q92786 737 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 TCTN2Q96GX1 697 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.29□□□□□ -1.24
NEK3-207ENST00000617054 PDE7BQ9NP56 450 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 KRT84Q9NSB2 600 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 FAM32AQ9Y421 112 aaKnown RBP7.29□□□□□ -1.24
NEK3-207ENST00000617054 KLK4Q9Y5K2 254 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 LOC400499M0QZD8 3231 aa7.29□□□□□ -1.24
NEK3-207ENST00000617054 TMEM247A6NEH6 219 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 CCDC160A6NGH7 325 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 HYAL3O43820 417 aaPredicted RBP7.28□□□□□ -1.24
NEK3-207ENST00000617054 XPNPEP2O43895 674 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 PCDHGA12O60330 932 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 GADD45GO95257 159 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 GPR75O95800 540 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 IFNW1P05000 195 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 ZNF10P21506 573 aaPredicted RBP7.28□□□□□ -1.24
NEK3-207ENST00000617054 PAX7P23759 505 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 SSTR4P31391 388 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 GSTM5P46439 218 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 AVPR1BP47901 424 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 MAN2A2P49641 1150 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 SEC23BQ15437 767 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 CEBPEQ15744 281 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 KDM4DQ6B0I6 523 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 LAIR1Q6GTX8 287 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 USP51Q70EK9 711 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 C16orf62Q7Z3J2 963 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 CLIP4Q8N3C7 705 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 SDR16C5Q8N3Y7 309 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 NATD1Q8N6N6 113 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 ZNF555Q8NEP9 628 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 MESP1Q9BRJ9 268 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 SLC38A1Q9H2H9 487 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 NMNAT1Q9HAN9 279 aaPredicted RBP7.28□□□□□ -1.24
NEK3-207ENST00000617054 CLK4Q9HAZ1 481 aaKnown RBP7.28□□□□□ -1.24
NEK3-207ENST00000617054 AMBNQ9NP70 447 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 DTX4Q9Y2E6 619 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 PCDHGB3Q9Y5G1 929 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 OR10H2O60403 315 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 GASTP01350 101 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 ATF4P18848 351 aaPredicted RBP7.28□□□□□ -1.24
NEK3-207ENST00000617054 CD1CP29017 333 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 FMO3P31513 532 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 XCR1P46094 333 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 KCNJ5P48544 419 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 ARL4DP49703 201 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 KHKP50053 298 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 CRISP3P54108 245 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 IL5RAQ01344 420 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 CD47Q08722 323 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 PRTGQ2VWP7 1150 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 ZC3H12BQ5HYM0 836 aaKnown RBP7.28□□□□□ -1.24
NEK3-207ENST00000617054 LAIR2Q6ISS4 152 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 MFSD12Q6NUT3 480 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 PIWIL3Q7Z3Z3 882 aaKnown RBP7.28□□□□□ -1.24
NEK3-207ENST00000617054 C1orf210Q8IVY1 113 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 LGI4Q8N135 537 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 PIK3C3Q8NEB9 887 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 BPIFB6Q8NFQ5 453 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 PHF10Q8WUB8 498 aaKnown RBP7.28□□□□□ -1.24
NEK3-207ENST00000617054 GEMIN6Q8WXD5 167 aaKnown RBP7.28□□□□□ -1.24
NEK3-207ENST00000617054 CCDC74AQ96AQ1 378 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 THAP11Q96EK4 314 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 GAREM1Q9H706 876 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 ZNF696Q9H7X3 374 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 PDP2Q9P2J9 529 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 C3orf18Q9UK00 162 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 CHST2Q9Y4C5 530 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 ZFHX4Q86UP3 3567 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 GXYLT2A0PJZ3 443 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 TLCD2A6NGC4 264 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 LILRA5A6NI73 299 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 A8MVJ9 347 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 H3BSA7 217 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 MAN1A2O60476 641 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 OR2B3O76000 313 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 IFNA14P01570 189 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 ACP2P11117 423 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 POU1F1P28069 291 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 GABRA4P48169 554 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 ARRB1P49407 418 aaPredicted RBP7.28□□□□□ -1.24
NEK3-207ENST00000617054 MAPK10P53779 464 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 STX4Q12846 297 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 PRICKLE4Q2TBC4 344 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 PLK5Q496M5 336 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 LIN52Q52LA3 116 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 ZNF628Q5EBL2 1059 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 VWA2Q5GFL6 755 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 ZNF311Q5JNZ3 666 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 PERM1Q5SV97 790 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 PMS2CLQ68D20 193 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 ZAR1Q86SH2 424 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 CCDC71Q8IV32 467 aaPredicted RBP7.28□□□□□ -1.24
NEK3-207ENST00000617054 EID2Q8N6I1 236 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 OR10G2Q8NGC3 310 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 OR52R1Q8NGF1 315 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 OR56A1Q8NGH5 318 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 GPR151Q8TDV0 419 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 GIPC3Q8TF64 312 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms