RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 TMIEQ8NEW7 156 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 OR4K13Q8NH42 304 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 CREB3L4Q8TEY5 395 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 TESCQ96BS2 214 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 NPLQ9BXD5 320 aaPredicted RBP13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 DEFB126Q9BYW3 111 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 ERVK13-1Q9NX77 482 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 CNIH4Q9P003 139 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 NRAPQ86VF7 1730 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 ISPDA4D126 451 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 CDC40O60508 579 aaKnown RBP eCLIP13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 HMGN2P05204 90 aaKnown RBP13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 ZNF888P0CJ79 500 aaPredicted RBP13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 CD97P48960 835 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 PRKCDQ05655 676 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 FAM189A2Q15884 450 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 ACOT4Q8N9L9 421 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 PAPD5Q8NDF8 572 aaKnown RBP13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 OR52E1Q8NGJ3 308 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 METTL2AQ96IZ6 378 aaKnown RBP13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 ZIC5Q96T25 663 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 ZBTB20Q9HC78 741 aaPredicted RBP13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 SCML1Q9UN30 329 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 HCFC2Q9Y5Z7 792 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 H3BMQ9 156 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 SDC3O75056 442 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 ADH7P40394 386 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 RBM34P42696 430 aaKnown RBP13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 CDKN2CP42773 168 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 KEAP1Q14145 624 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 GRM7Q14831 915 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 C1orf189Q5VU69 101 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 RFLNAQ6ZTI6 216 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 RASGEF1AQ8N9B8 481 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 INO80EQ8NBZ0 244 aaPredicted RBP13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 OR2A12Q8NGT7 310 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 WDR20Q8TBZ3 569 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 COG8Q96MW5 612 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 SERINC2Q96SA4 455 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 HIDE1A8MVS5 230 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 PRH1P02810 166 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 PGCP20142 388 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 CLRN1P58418 232 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 MAP4K2Q12851 820 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 TBRG1Q3YBR2 411 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 GLT8D1Q68CQ7 371 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 MSLNLQ96KJ4 702 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 NOP16Q9Y3C1 178 aaKnown RBP13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 PCDHGA8Q9Y5G5 932 aa13.51□□□□□ -0.25
PCDHB16-201ENST00000609684 NHSL1Q5SYE7 1610 aa13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 M0R129 80 aa13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 IFNA7P01567 189 aa13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 ENDOUP21128 410 aaKnown RBP13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 MAP2K3P46734 347 aa13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 GJA8P48165 433 aa13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 HNRNPKP61978 463 aaKnown RBP eCLIP13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 POU4F2Q12837 409 aa13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 ARHGAP19Q14CB8 494 aa13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 GPR149Q86SP6 731 aa13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 SLC15A4Q8N697 577 aa13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 LMNTD1Q8N9Z9 388 aa13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 ABHD11Q8NFV4 315 aa13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 CNN2Q99439 309 aaKnown RBP13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 CWH43Q9H720 699 aa13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 DNMT3BQ9UBC3 853 aaKnown RBP13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 HS3ST2Q9Y278 367 aa13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 PLEKHA6Q9Y2H5 1048 aa13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 COL16A1Q07092 1604 aaPredicted RBP13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 KANTRA0A1W2PQU2 76 aa13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 TP53I11O14683 189 aa13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 PSMB5P28074 263 aa13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 APOFQ13790 326 aa13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 SPERTQ8NA61 448 aa13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 OR8S1Q8NH09 359 aa13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 ZNF431Q8TF32 576 aaPredicted RBP13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 SAMD8Q96LT4 415 aa13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 METTL8Q9H825 291 aaKnown RBP13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 TMEM14AQ9Y6G1 99 aa13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 CLUP10909 449 aa13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 TACR1P25103 407 aa13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 CEBPGP53567 150 aa13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 IRF4Q15306 451 aa13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 C6orf132Q5T0Z8 1188 aa13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 CCBE1Q6UXH8 406 aaPredicted RBP13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 GAREM2Q75VX8 874 aa13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 TMPRSS12Q86WS5 348 aa13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 ZNF283Q8N7M2 679 aa13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 NXPE2Q96DL1 559 aa13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 RXFP3Q9NSD7 469 aa13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 PGAP2Q9UHJ9 254 aa13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 BCAS1O75363 584 aaPredicted RBP13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 PDX1P52945 283 aa13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 GNG2P59768 71 aa13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 MGAT3Q09327 533 aa13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 GK3PQ14409 553 aa13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 PDSS1Q5T2R2 415 aa13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 ZNF440Q8IYI8 595 aa13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 ASB6Q9NWX5 421 aa13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 ACTR10Q9NZ32 417 aa13.5□□□□□ -0.25
PCDHB16-201ENST00000609684 PPP4R1LQ9P1A2 415 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms