RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 MS4A15Q8N5U1 240 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 DEFB119Q8N690 84 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 ZNF548Q8NEK5 533 aaPredicted RBP4.81□□□□□ -1.64
SSX9-202ENST00000608568 TSTD1Q8NFU3 115 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 NLGN4YQ8NFZ3 816 aaPredicted RBP4.81□□□□□ -1.64
SSX9-202ENST00000608568 OR9I1Q8NGQ6 314 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 OR2T29Q8NH02 315 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 JOSD2Q8TAC2 188 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 RHEBL1Q8TAI7 183 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 DNAJB14Q8TBM8 379 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 TMEM163Q8TC26 289 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 CREB3L4Q8TEY5 395 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 TWIST2Q8WVJ9 160 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 HMGB4Q8WW32 186 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 ACOT12Q8WYK0 555 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 CENPIQ92674 756 aaPredicted RBP4.81□□□□□ -1.64
SSX9-202ENST00000608568 RIT1Q92963 219 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 CPNE4Q96A23 557 aaPredicted RBP4.81□□□□□ -1.64
SSX9-202ENST00000608568 FUBP1Q96AE4 644 aaKnown RBP4.81□□□□□ -1.64
SSX9-202ENST00000608568 RAB7BQ96AH8 199 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 PYCR2Q96C36 320 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 RHBDF1Q96CC6 855 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 PGAP3Q96FM1 320 aaPredicted RBP4.81□□□□□ -1.64
SSX9-202ENST00000608568 SMARCD1Q96GM5 515 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 DIRAS2Q96HU8 199 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 PYURFQ96I23 114 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 ZC3H10Q96K80 434 aaKnown RBP4.81□□□□□ -1.64
SSX9-202ENST00000608568 COQ10AQ96MF6 247 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 LINC00052Q96N35 136 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 ZNF285Q96NJ3 590 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 EPYCQ99645 322 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 MGLLQ99685 303 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 CHCHD6Q9BRQ6 235 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 INPP5KQ9BT40 448 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 MED10Q9BTT4 135 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 TMEM43Q9BTV4 400 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 ERVK-6Q9BXR3 956 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 TRIM8Q9BZR9 551 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 GHITMQ9H3K2 345 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 OPA3Q9H6K4 179 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 ITM2CQ9NQX7 267 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 CISHQ9NSE2 258 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 TMEM74BQ9NUR3 256 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 CD274Q9NZQ7 290 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 POLG2Q9UHN1 485 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 RPS6KA6Q9UK32 745 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 CLEC4EQ9ULY5 219 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 EDARQ9UNE0 448 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 SSR3Q9UNL2 185 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 MGAT4BQ9UQ53 548 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 DMRT1Q9Y5R6 373 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 NUBP2Q9Y5Y2 271 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 SLCO1B1Q9Y6L6 691 aa4.81□□□□□ -1.64
SSX9-202ENST00000608568 ZNF106Q9H2Y7 1883 aaKnown RBP4.81□□□□□ -1.64
SSX9-202ENST00000608568 COL12A1Q99715 3063 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 PTPN13Q12923 2485 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 A0A1W2PQF6 199 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 TCRBV21S2A2A0A5A6 115 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 IRGMA1A4Y4 181 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 PMS2P1A4D2B8 440 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 TRAPPC13A5PLN9 417 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 C4orf47A7E2U8 309 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 A8MUA0 341 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 LINC00587B1AMM8 73 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 TMEM233B4DJY2 109 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 D6RAR5 112 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 PSMD9O00233 223 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 CBX4O00257 560 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 CXCR6O00574 342 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 CDX4O14627 284 aaPredicted RBP4.8□□□□□ -1.64
SSX9-202ENST00000608568 ATXN7O15265 892 aaPredicted RBP4.8□□□□□ -1.64
SSX9-202ENST00000608568 EFSO43281 561 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 SGCEO43556 437 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 NOBOXO60393 691 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 TLR5O60602 858 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 GPX5O75715 221 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 AQP8O94778 261 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 KAT7O95251 611 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 POP4O95707 220 aaKnown RBP4.8□□□□□ -1.64
SSX9-202ENST00000608568 MLYCDO95822 493 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 IFNGP01579 166 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 KLKB1P03952 638 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 ANXA8P13928 327 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 HGFP14210 728 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 HPGDP15428 266 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 NCK1P16333 377 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 CPEP16870 476 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 GABRG2P18507 467 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 TSPAN8P19075 237 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 GALP22466 123 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 DNASE1P24855 282 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 YWHAQP27348 245 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 LCN1P31025 176 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 CNR2P34972 360 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 GNALP38405 381 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 P2RY2P41231 377 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 TSPAN7P41732 249 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 RPL35P42766 123 aaKnown RBP4.8□□□□□ -1.64
SSX9-202ENST00000608568 ASMTP46597 345 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms