RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 ARHGAP42A6NI28 874 aa2.93□□□□□ -1.94
RNU6-88P-201ENST00000606801 NPIPA5E9PKD4 350 aa2.93□□□□□ -1.94
RNU6-88P-201ENST00000606801 BUB1O43683 1085 aa2.93□□□□□ -1.94
RNU6-88P-201ENST00000606801 SDC3O75056 442 aa2.93□□□□□ -1.94
RNU6-88P-201ENST00000606801 PTBP3O95758 552 aaKnown RBP2.93□□□□□ -1.94
RNU6-88P-201ENST00000606801 IGSF6O95976 241 aa2.93□□□□□ -1.94
RNU6-88P-201ENST00000606801 GAP43P17677 238 aa2.93□□□□□ -1.94
RNU6-88P-201ENST00000606801 PRDX2P32119 198 aa2.93□□□□□ -1.94
RNU6-88P-201ENST00000606801 RFC2P35250 354 aa2.93□□□□□ -1.94
RNU6-88P-201ENST00000606801 MAGEA4P43358 317 aa2.93□□□□□ -1.94
RNU6-88P-201ENST00000606801 BRCC3P46736 316 aa2.93□□□□□ -1.94
RNU6-88P-201ENST00000606801 SLC7A2P52569 658 aa2.93□□□□□ -1.94
RNU6-88P-201ENST00000606801 GSTO1P78417 241 aa2.93□□□□□ -1.94
RNU6-88P-201ENST00000606801 MYBPC1Q00872 1141 aa2.93□□□□□ -1.94
RNU6-88P-201ENST00000606801 IL1RL1Q01638 556 aa2.93□□□□□ -1.94
RNU6-88P-201ENST00000606801 PAX2Q02962 417 aa2.93□□□□□ -1.94
RNU6-88P-201ENST00000606801 RUNX3Q13761 415 aa2.93□□□□□ -1.94
RNU6-88P-201ENST00000606801 CRMP1Q14194 572 aa2.93□□□□□ -1.94
RNU6-88P-201ENST00000606801 CCDC40Q4G0X9 1142 aa2.93□□□□□ -1.94
RNU6-88P-201ENST00000606801 PARP10Q53GL7 1025 aa2.93□□□□□ -1.94
RNU6-88P-201ENST00000606801 CWC27Q6UX04 472 aaKnown RBP2.93□□□□□ -1.94
RNU6-88P-201ENST00000606801 RANBP3LQ86VV4 465 aaPredicted RBP2.93□□□□□ -1.94
RNU6-88P-201ENST00000606801 SPEM1Q8N4L4 309 aa2.93□□□□□ -1.94
RNU6-88P-201ENST00000606801 ARFGAP2Q8N6H7 521 aa2.93□□□□□ -1.94
RNU6-88P-201ENST00000606801 RNF148Q8N7C7 305 aa2.93□□□□□ -1.94
RNU6-88P-201ENST00000606801 FNDC8Q8TC99 324 aa2.93□□□□□ -1.94
RNU6-88P-201ENST00000606801 TBCKQ8TEA7 893 aa2.93□□□□□ -1.94
RNU6-88P-201ENST00000606801 CCDC47Q96A33 483 aaKnown RBP2.93□□□□□ -1.94
RNU6-88P-201ENST00000606801 SAMD8Q96LT4 415 aa2.93□□□□□ -1.94
RNU6-88P-201ENST00000606801 APOL2Q9BQE5 337 aa2.93□□□□□ -1.94
RNU6-88P-201ENST00000606801 TRIM9Q9C026 710 aa2.93□□□□□ -1.94
RNU6-88P-201ENST00000606801 FAM114A2Q9NRY5 505 aa2.93□□□□□ -1.94
RNU6-88P-201ENST00000606801 SOHLH2Q9NX45 425 aa2.93□□□□□ -1.94
RNU6-88P-201ENST00000606801 PIN4Q9Y237 131 aaKnown RBP2.93□□□□□ -1.94
RNU6-88P-201ENST00000606801 CHD4Q14839 1912 aa2.93□□□□□ -1.94
RNU6-88P-201ENST00000606801 ATRXP46100 2492 aa2.92□□□□□ -1.94
RNU6-88P-201ENST00000606801 MT-ATP6P00846 226 aa2.92□□□□□ -1.94
RNU6-88P-201ENST00000606801 THY1P04216 161 aa2.92□□□□□ -1.94
RNU6-88P-201ENST00000606801 CCNA2P20248 432 aa2.92□□□□□ -1.94
RNU6-88P-201ENST00000606801 IGFBP5P24593 272 aa2.92□□□□□ -1.94
RNU6-88P-201ENST00000606801 FASP25445 335 aa2.92□□□□□ -1.94
RNU6-88P-201ENST00000606801 TRA2BP62995 288 aaKnown RBP2.92□□□□□ -1.94
RNU6-88P-201ENST00000606801 GABPB1Q06547 395 aaPredicted RBP2.92□□□□□ -1.94
RNU6-88P-201ENST00000606801 PDIA5Q14554 519 aa2.92□□□□□ -1.94
RNU6-88P-201ENST00000606801 SMC1AQ14683 1233 aaKnown RBP2.92□□□□□ -1.94
RNU6-88P-201ENST00000606801 TGIF1Q15583 401 aa2.92□□□□□ -1.94
RNU6-88P-201ENST00000606801 IL23RQ5VWK5 629 aa2.92□□□□□ -1.94
RNU6-88P-201ENST00000606801 PRR5LQ6MZQ0 368 aa2.92□□□□□ -1.94
RNU6-88P-201ENST00000606801 CGB2Q6NT52 195 aa2.92□□□□□ -1.94
RNU6-88P-201ENST00000606801 OLFM4Q6UX06 510 aa2.92□□□□□ -1.94
RNU6-88P-201ENST00000606801 ISLR2Q6UXK2 745 aa2.92□□□□□ -1.94
RNU6-88P-201ENST00000606801 GOLGA7Q7Z5G4 137 aa2.92□□□□□ -1.94
RNU6-88P-201ENST00000606801 GPBP1Q86WP2 473 aa2.92□□□□□ -1.94
RNU6-88P-201ENST00000606801 CCDC36Q8IYA8 594 aa2.92□□□□□ -1.94
RNU6-88P-201ENST00000606801 KDM8Q8N371 416 aa2.92□□□□□ -1.94
RNU6-88P-201ENST00000606801 ARL14Q8N4G2 192 aa2.92□□□□□ -1.94
RNU6-88P-201ENST00000606801 WDR36Q8NI36 951 aaKnown RBP2.92□□□□□ -1.94
RNU6-88P-201ENST00000606801 DNAJA3Q96EY1 480 aa2.92□□□□□ -1.94
RNU6-88P-201ENST00000606801 C11orf24Q96F05 449 aaPredicted RBP2.92□□□□□ -1.94
RNU6-88P-201ENST00000606801 RBM18Q96H35 190 aaKnown RBP2.92□□□□□ -1.94
RNU6-88P-201ENST00000606801 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.92□□□□□ -1.94
RNU6-88P-201ENST00000606801 RAI14Q9P0K7 980 aa2.92□□□□□ -1.94
RNU6-88P-201ENST00000606801 PRODH2Q9UF12 536 aa2.92□□□□□ -1.94
RNU6-88P-201ENST00000606801 Q9UF83 564 aa2.92□□□□□ -1.94
RNU6-88P-201ENST00000606801 FZR1Q9UM11 496 aa2.92□□□□□ -1.94
RNU6-88P-201ENST00000606801 SLC9A8Q9Y2E8 581 aa2.92□□□□□ -1.94
RNU6-88P-201ENST00000606801 NAALAD2Q9Y3Q0 740 aa2.92□□□□□ -1.94
RNU6-88P-201ENST00000606801 CUX2O14529 1486 aa2.91□□□□□ -1.94
RNU6-88P-201ENST00000606801 A0A0J9YVX5 310 aa2.91□□□□□ -1.94
RNU6-88P-201ENST00000606801 RNF222A6NCQ9 220 aa2.91□□□□□ -1.94
RNU6-88P-201ENST00000606801 MFSD2BA6NFX1 497 aa2.91□□□□□ -1.94
RNU6-88P-201ENST00000606801 ZSCAN5CA6NGD5 496 aaPredicted RBP2.91□□□□□ -1.94
RNU6-88P-201ENST00000606801 E9PMD0 336 aa2.91□□□□□ -1.94
RNU6-88P-201ENST00000606801 SGK494L7N484 410 aa2.91□□□□□ -1.94
RNU6-88P-201ENST00000606801 NUDT14O95848 222 aa2.91□□□□□ -1.94
RNU6-88P-201ENST00000606801 CCDC192P0DO97 292 aa2.91□□□□□ -1.94
RNU6-88P-201ENST00000606801 LAMP1P11279 417 aa2.91□□□□□ -1.94
RNU6-88P-201ENST00000606801 PVRP15151 417 aa2.91□□□□□ -1.94
RNU6-88P-201ENST00000606801 IDSP22304 550 aa2.91□□□□□ -1.94
RNU6-88P-201ENST00000606801 PTPN6P29350 595 aa2.91□□□□□ -1.94
RNU6-88P-201ENST00000606801 OR1D4P47884 311 aa2.91□□□□□ -1.94
RNU6-88P-201ENST00000606801 SPP2Q13103 211 aa2.91□□□□□ -1.94
RNU6-88P-201ENST00000606801 NME3Q13232 169 aa2.91□□□□□ -1.94
RNU6-88P-201ENST00000606801 SNX1Q13596 522 aa2.91□□□□□ -1.94
RNU6-88P-201ENST00000606801 KARSQ15046 597 aaKnown RBP2.91□□□□□ -1.94
RNU6-88P-201ENST00000606801 PPP1R3AQ16821 1122 aa2.91□□□□□ -1.94
RNU6-88P-201ENST00000606801 TIMM50Q3ZCQ8 353 aa2.91□□□□□ -1.94
RNU6-88P-201ENST00000606801 ATAD3CQ5T2N8 411 aa2.91□□□□□ -1.94
RNU6-88P-201ENST00000606801 PNCKQ6P2M8 343 aa2.91□□□□□ -1.94
RNU6-88P-201ENST00000606801 LEG1Q6P5S2 330 aa2.91□□□□□ -1.94
RNU6-88P-201ENST00000606801 ZNF562Q6V9R5 426 aa2.91□□□□□ -1.94
RNU6-88P-201ENST00000606801 PAQR9Q6ZVX9 377 aa2.91□□□□□ -1.94
RNU6-88P-201ENST00000606801 SERINC5Q86VE9 423 aa2.91□□□□□ -1.94
RNU6-88P-201ENST00000606801 HDDC3Q8N4P3 179 aa2.91□□□□□ -1.94
RNU6-88P-201ENST00000606801 KLHL30-AS1Q8NEE0 82 aa2.91□□□□□ -1.94
RNU6-88P-201ENST00000606801 OR56B1Q8NGI3 324 aa2.91□□□□□ -1.94
RNU6-88P-201ENST00000606801 OR52J3Q8NH60 311 aa2.91□□□□□ -1.94
RNU6-88P-201ENST00000606801 MRAPQ8TCY5 172 aa2.91□□□□□ -1.94
RNU6-88P-201ENST00000606801 GTSF1Q8WW33 167 aa2.91□□□□□ -1.94
RNU6-88P-201ENST00000606801 MCHR2Q969V1 340 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms