RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 MPIP34949 423 aa21.46■■□□□ 1.03
LSM4-204ENST00000594828 CRYZQ08257 329 aaKnown RBP21.46■■□□□ 1.03
LSM4-204ENST00000594828 C2orf80Q0P641 193 aa21.46■■□□□ 1.03
LSM4-204ENST00000594828 CEBPEQ15744 281 aa21.46■■□□□ 1.03
LSM4-204ENST00000594828 ANGPTL8Q6UXH0 198 aa21.46■■□□□ 1.03
LSM4-204ENST00000594828 FRMD7Q6ZUT3 714 aa21.46■■□□□ 1.03
LSM4-204ENST00000594828 EPS8L3Q8TE67 593 aaKnown RBP21.46■■□□□ 1.03
LSM4-204ENST00000594828 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.46■■□□□ 1.03
LSM4-204ENST00000594828 C12orf65Q9H3J6 166 aaKnown RBP21.46■■□□□ 1.03
LSM4-204ENST00000594828 OXSMQ9NWU1 459 aa21.46■■□□□ 1.03
LSM4-204ENST00000594828 FBN2P35556 2912 aa21.46■■□□□ 1.03
LSM4-204ENST00000594828 ICOSLGO75144 302 aa21.45■■□□□ 1.02
LSM4-204ENST00000594828 UGT2B11O75310 529 aa21.45■■□□□ 1.02
LSM4-204ENST00000594828 KRT4P19013 534 aa21.45■■□□□ 1.02
LSM4-204ENST00000594828 DDCP20711 480 aa21.45■■□□□ 1.02
LSM4-204ENST00000594828 ZNF763Q0D2J5 394 aa21.45■■□□□ 1.02
LSM4-204ENST00000594828 SNTA1Q13424 505 aa21.45■■□□□ 1.02
LSM4-204ENST00000594828 ERCC6LQ2NKX8 1250 aa21.45■■□□□ 1.02
LSM4-204ENST00000594828 RIPPLY2Q5TAB7 128 aa21.45■■□□□ 1.02
LSM4-204ENST00000594828 TRIM46Q7Z4K8 759 aa21.45■■□□□ 1.02
LSM4-204ENST00000594828 LIX1LQ8IVB5 337 aa21.45■■□□□ 1.02
LSM4-204ENST00000594828 CDC26Q8NHZ8 85 aa21.45■■□□□ 1.02
LSM4-204ENST00000594828 TMBIM1Q969X1 311 aa21.45■■□□□ 1.02
LSM4-204ENST00000594828 BBS4Q96RK4 519 aa21.45■■□□□ 1.02
LSM4-204ENST00000594828 OSBPL11Q9BXB4 747 aa21.45■■□□□ 1.02
LSM4-204ENST00000594828 SHCBP1LQ9BZQ2 653 aa21.45■■□□□ 1.02
LSM4-204ENST00000594828 MCCC2Q9HCC0 563 aa21.45■■□□□ 1.02
LSM4-204ENST00000594828 KLRF1Q9NZS2 232 aa21.45■■□□□ 1.02
LSM4-204ENST00000594828 SENP1Q9P0U3 644 aa21.45■■□□□ 1.02
LSM4-204ENST00000594828 SLC6A5Q9Y345 797 aa21.45■■□□□ 1.02
LSM4-204ENST00000594828 HCFC1P51610 2035 aa21.45■■□□□ 1.02
LSM4-204ENST00000594828 C2orf72A6NCS6 295 aa21.44■■□□□ 1.02
LSM4-204ENST00000594828 REM1O75628 298 aa21.44■■□□□ 1.02
LSM4-204ENST00000594828 PTPN6P29350 595 aa21.44■■□□□ 1.02
LSM4-204ENST00000594828 PTGDSP41222 190 aa21.44■■□□□ 1.02
LSM4-204ENST00000594828 EIPR1Q53HC9 387 aa21.44■■□□□ 1.02
LSM4-204ENST00000594828 VASNQ6EMK4 673 aa21.44■■□□□ 1.02
LSM4-204ENST00000594828 DMRTC2Q8IXT2 367 aaPredicted RBP21.44■■□□□ 1.02
LSM4-204ENST00000594828 PM20D2Q8IYS1 436 aa21.44■■□□□ 1.02
LSM4-204ENST00000594828 FAM9CQ8IZT9 166 aa21.44■■□□□ 1.02
LSM4-204ENST00000594828 CLYBLQ8N0X4 340 aa21.44■■□□□ 1.02
LSM4-204ENST00000594828 TMCO6Q96DC7 493 aa21.44■■□□□ 1.02
LSM4-204ENST00000594828 COL21A1Q96P44 957 aa21.44■■□□□ 1.02
LSM4-204ENST00000594828 BTBD9Q96Q07 612 aa21.44■■□□□ 1.02
LSM4-204ENST00000594828 GALNT9Q9HCQ5 603 aa21.44■■□□□ 1.02
LSM4-204ENST00000594828 RRAGDQ9NQL2 400 aaPredicted RBP21.44■■□□□ 1.02
LSM4-204ENST00000594828 ABCA12Q86UK0 2595 aa21.43■■□□□ 1.02
LSM4-204ENST00000594828 EXPH5Q8NEV8 1989 aa21.43■■□□□ 1.02
LSM4-204ENST00000594828 OR6C70A6NIJ9 312 aa21.43■■□□□ 1.02
LSM4-204ENST00000594828 SNPHO15079 494 aa21.43■■□□□ 1.02
LSM4-204ENST00000594828 PLOD3O60568 738 aa21.43■■□□□ 1.02
LSM4-204ENST00000594828 NME6O75414 186 aaPredicted RBP21.43■■□□□ 1.02
LSM4-204ENST00000594828 ERN1O75460 977 aaKnown RBP21.43■■□□□ 1.02
LSM4-204ENST00000594828 RSL1D1O76021 490 aaKnown RBP21.43■■□□□ 1.02
LSM4-204ENST00000594828 EPPINO95925 133 aa21.43■■□□□ 1.02
LSM4-204ENST00000594828 CT45A8P0DMV1 189 aa21.43■■□□□ 1.02
LSM4-204ENST00000594828 CT45A9P0DMV2 189 aa21.43■■□□□ 1.02
LSM4-204ENST00000594828 UROSP10746 265 aa21.43■■□□□ 1.02
LSM4-204ENST00000594828 CAPN3P20807 821 aa21.43■■□□□ 1.02
LSM4-204ENST00000594828 KRTAP10-9P60411 292 aa21.43■■□□□ 1.02
LSM4-204ENST00000594828 SF3B4Q15427 424 aaKnown RBP eCLIP21.43■■□□□ 1.02
LSM4-204ENST00000594828 CT45A2Q5DJT8 189 aa21.43■■□□□ 1.02
LSM4-204ENST00000594828 NHSL2Q5HYW2 709 aa21.43■■□□□ 1.02
LSM4-204ENST00000594828 WIPI1Q5MNZ9 446 aaPredicted RBP21.43■■□□□ 1.02
LSM4-204ENST00000594828 SEM1Q6ZVN7 128 aa21.43■■□□□ 1.02
LSM4-204ENST00000594828 C4orf33Q8N1A6 199 aa21.43■■□□□ 1.02
LSM4-204ENST00000594828 FAM76AQ8TAV0 307 aa21.43■■□□□ 1.02
LSM4-204ENST00000594828 TNFRSF12AQ9NP84 129 aa21.43■■□□□ 1.02
LSM4-204ENST00000594828 MIEF1Q9NQG6 463 aa21.43■■□□□ 1.02
LSM4-204ENST00000594828 TAS2R9Q9NYW1 312 aa21.43■■□□□ 1.02
LSM4-204ENST00000594828 EXO1Q9UQ84 846 aaKnown RBP21.43■■□□□ 1.02
LSM4-204ENST00000594828 WBP11Q9Y2W2 641 aaKnown RBP21.43■■□□□ 1.02
LSM4-204ENST00000594828 POLR3HQ9Y535 204 aaPredicted RBP21.43■■□□□ 1.02
LSM4-204ENST00000594828 PRAMEF25A6NGN4 478 aa21.42■■□□□ 1.02
LSM4-204ENST00000594828 HSPB2A8KAH6 182 aa21.42■■□□□ 1.02
LSM4-204ENST00000594828 MYO1GB0I1T2 1018 aa21.42■■□□□ 1.02
LSM4-204ENST00000594828 ABCB7O75027 752 aa21.42■■□□□ 1.02
LSM4-204ENST00000594828 FREM3P0C091 2139 aa21.42■■□□□ 1.02
LSM4-204ENST00000594828 BMP7P18075 431 aa21.42■■□□□ 1.02
LSM4-204ENST00000594828 CORO7P57737 925 aa21.42■■□□□ 1.02
LSM4-204ENST00000594828 SLC18A2Q05940 514 aa21.42■■□□□ 1.02
LSM4-204ENST00000594828 HSPB2Q16082 182 aa21.42■■□□□ 1.02
LSM4-204ENST00000594828 SLC25A35Q3KQZ1 300 aa21.42■■□□□ 1.02
LSM4-204ENST00000594828 ACSF3Q4G176 576 aaPredicted RBP21.42■■□□□ 1.02
LSM4-204ENST00000594828 LIPMQ5VYY2 423 aa21.42■■□□□ 1.02
LSM4-204ENST00000594828 FAM71E1Q6IPT2 247 aa21.42■■□□□ 1.02
LSM4-204ENST00000594828 WDR53Q7Z5U6 358 aaPredicted RBP21.42■■□□□ 1.02
LSM4-204ENST00000594828 YRDCQ86U90 279 aaKnown RBP21.42■■□□□ 1.02
LSM4-204ENST00000594828 ADGRG4Q8IZF6 3080 aa21.42■■□□□ 1.02
LSM4-204ENST00000594828 FAM83FQ8NEG4 500 aaPredicted RBP21.42■■□□□ 1.02
LSM4-204ENST00000594828 OR7G2Q8NG99 324 aa21.42■■□□□ 1.02
LSM4-204ENST00000594828 PUM2Q8TB72 1066 aaKnown RBP eCLIP21.42■■□□□ 1.02
LSM4-204ENST00000594828 SLC35A4Q96G79 324 aa21.42■■□□□ 1.02
LSM4-204ENST00000594828 VSTM2LQ96N03 204 aa21.42■■□□□ 1.02
LSM4-204ENST00000594828 ADOQ96SZ5 270 aa21.42■■□□□ 1.02
LSM4-204ENST00000594828 UGT2B28Q9BY64 529 aa21.42■■□□□ 1.02
LSM4-204ENST00000594828 PRDM14Q9GZV8 571 aa21.42■■□□□ 1.02
LSM4-204ENST00000594828 STMN4Q9H169 189 aaPredicted RBP21.42■■□□□ 1.02
LSM4-204ENST00000594828 FOLH1BQ9HBA9 442 aa21.42■■□□□ 1.02
LSM4-204ENST00000594828 TAS2R7Q9NYW3 318 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms