RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 GADD45GO95257 159 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 BMP10O95393 424 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 ZBTB11O95625 1053 aaPredicted RBP8.2□□□□□ -1.1
SMAD4-206ENST00000588860 ALPPP05187 535 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 TFAP2AP05549 437 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 ACP2P11117 423 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 MYF5P13349 255 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 RNH1P13489 461 aaKnown RBP8.2□□□□□ -1.1
SMAD4-206ENST00000588860 ETS2P15036 469 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 GNSP15586 552 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 IL7RP16871 459 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 RHCEP18577 417 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 ELK4P28324 431 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 HOXA6P31267 233 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 GABRA4P48169 554 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 ARRB1P49407 418 aaPredicted RBP8.2□□□□□ -1.1
SMAD4-206ENST00000588860 MAN2A2P49641 1150 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 ARL4DP49703 201 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 CLK3P49761 638 aaKnown RBP8.2□□□□□ -1.1
SMAD4-206ENST00000588860 NR1H2P55055 460 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 BNC1Q01954 994 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 IL18R1Q13478 541 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 GANABQ14697 944 aaKnown RBP8.2□□□□□ -1.1
SMAD4-206ENST00000588860 MICAQ29983 383 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 AMZ1Q400G9 498 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 FHL5Q5TD97 284 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 ZNF691Q5VV52 312 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 ZNF605Q86T29 641 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 SLC35F3Q8IY50 421 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 TAGAPQ8N103 731 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 OR2L13Q8N349 312 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 SLC25A45Q8N413 288 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 SLC5A8Q8N695 610 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 METTL27Q8N6F8 245 aaPredicted RBP8.2□□□□□ -1.1
SMAD4-206ENST00000588860 TMEM105Q8N8V8 129 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 SETD9Q8NE22 299 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 PIK3C3Q8NEB9 887 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 OR6C4Q8NGE1 309 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 APOBEC4Q8WW27 367 aaKnown RBP8.2□□□□□ -1.1
SMAD4-206ENST00000588860 ANKRD9Q96BM1 317 aaPredicted RBP8.2□□□□□ -1.1
SMAD4-206ENST00000588860 SLC35A4Q96G79 324 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 TRNT1Q96Q11 434 aaKnown RBP8.2□□□□□ -1.1
SMAD4-206ENST00000588860 BTBD2Q9BX70 525 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 PINK1Q9BXM7 581 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 YTHDF1Q9BYJ9 559 aaKnown RBP8.2□□□□□ -1.1
SMAD4-206ENST00000588860 RAB33BQ9H082 229 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 CXorf56Q9H5V9 222 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 TRIM45Q9H8W5 580 aaPredicted RBP8.2□□□□□ -1.1
SMAD4-206ENST00000588860 ADAP2Q9NPF8 381 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 PRMT8Q9NR22 394 aaPredicted RBP8.2□□□□□ -1.1
SMAD4-206ENST00000588860 GIN1Q9NXP7 522 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 NTMQ9P121 344 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 EPHA6Q9UF33 1036 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 GMPPBQ9Y5P6 360 aa8.2□□□□□ -1.1
SMAD4-206ENST00000588860 IGHV1OR21-1A0A087WYE8 117 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 SMIM31A0A1B0GVY4 71 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 DUXAA6NLW8 204 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 PCDH17O14917 1159 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 LAMTOR5O43504 91 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 FOXS1O43638 330 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 NUDT21O43809 227 aaKnown RBP8.19□□□□□ -1.1
SMAD4-206ENST00000588860 SLITRK5O94991 958 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 AGR2O95994 175 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 ATP1B1P05026 303 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 ALOX5P09917 674 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 TDGF1P13385 188 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 POLR2IP36954 125 aaKnown RBP8.19□□□□□ -1.1
SMAD4-206ENST00000588860 GCGRP47871 477 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 AVPR1BP47901 424 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 LIMS1P48059 325 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 SEPHS1P49903 392 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 PDX1P52945 283 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 TUBA4AP68366 448 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 MAT1AQ00266 395 aaKnown RBP8.19□□□□□ -1.1
SMAD4-206ENST00000588860 IL5RAQ01344 420 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 CHRNEQ04844 493 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 CSTF1Q05048 431 aaKnown RBP8.19□□□□□ -1.1
SMAD4-206ENST00000588860 ZNF155Q12901 538 aaPredicted RBP8.19□□□□□ -1.1
SMAD4-206ENST00000588860 SLC13A2Q13183 592 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 TOP3AQ13472 1001 aaPredicted RBP8.19□□□□□ -1.1
SMAD4-206ENST00000588860 KEAP1Q14145 624 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 KCNAB1Q14722 419 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 EXOSC7Q15024 291 aaKnown RBP8.19□□□□□ -1.1
SMAD4-206ENST00000588860 SHBQ15464 509 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 MEP1AQ16819 746 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 CTU2Q2VPK5 515 aaKnown RBP8.19□□□□□ -1.1
SMAD4-206ENST00000588860 NADK2Q4G0N4 442 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 TRMT12Q53H54 448 aaKnown RBP8.19□□□□□ -1.1
SMAD4-206ENST00000588860 FGD3Q5JSP0 725 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 TCTE1Q5JU00 501 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 RBM48Q5RL73 367 aaKnown RBP8.19□□□□□ -1.1
SMAD4-206ENST00000588860 SNAP47Q5SQN1 464 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 GARNL3Q5VVW2 1013 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 PMS2CLQ68D20 193 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 NIPAL1Q6NVV3 410 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 COMTD1Q86VU5 262 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 RBM45Q8IUH3 476 aaKnown RBP8.19□□□□□ -1.1
SMAD4-206ENST00000588860 LACC1Q8IV20 430 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 SIMC1Q8NDZ2 872 aa8.19□□□□□ -1.1
SMAD4-206ENST00000588860 CHDHQ8NE62 594 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms