RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 TMEM64Q6YI46 380 aa14.94□□□□□ -0.02
ERBB2-222ENST00000584908 FAM47EQ6ZV65 393 aa14.94□□□□□ -0.02
ERBB2-222ENST00000584908 CHERPQ8IWX8 916 aaKnown RBP14.94□□□□□ -0.02
ERBB2-222ENST00000584908 FAM13CQ8NE31 585 aa14.94□□□□□ -0.02
ERBB2-222ENST00000584908 CIDECQ96AQ7 238 aaPredicted RBP14.94□□□□□ -0.02
ERBB2-222ENST00000584908 ZBED6CLQ96FA7 236 aaPredicted RBP14.94□□□□□ -0.02
ERBB2-222ENST00000584908 TTTY12Q9BZ98 90 aa14.94□□□□□ -0.02
ERBB2-222ENST00000584908 ZDHHC11Q9H8X9 412 aa14.94□□□□□ -0.02
ERBB2-222ENST00000584908 FOLH1BQ9HBA9 442 aa14.94□□□□□ -0.02
ERBB2-222ENST00000584908 PNPOQ9NVS9 261 aa14.94□□□□□ -0.02
ERBB2-222ENST00000584908 NPIPA1Q9UND3 350 aa14.94□□□□□ -0.02
ERBB2-222ENST00000584908 EIF3LQ9Y262 564 aaKnown RBP14.94□□□□□ -0.02
ERBB2-222ENST00000584908 ZNF835Q9Y2P0 537 aa14.94□□□□□ -0.02
ERBB2-222ENST00000584908 NUP214P35658 2090 aaPredicted RBP14.94□□□□□ -0.02
ERBB2-222ENST00000584908 NCKAP5O14513 1909 aa14.94□□□□□ -0.02
ERBB2-222ENST00000584908 WIPF3A6NGB9 483 aa14.93□□□□□ -0.02
ERBB2-222ENST00000584908 ERN1O75460 977 aaKnown RBP14.93□□□□□ -0.02
ERBB2-222ENST00000584908 PRPS1L1P21108 318 aa14.93□□□□□ -0.02
ERBB2-222ENST00000584908 PIGAP37287 484 aa14.93□□□□□ -0.02
ERBB2-222ENST00000584908 DNASE1L1P49184 302 aa14.93□□□□□ -0.02
ERBB2-222ENST00000584908 FBXW4P57775 412 aa14.93□□□□□ -0.02
ERBB2-222ENST00000584908 RBPJQ06330 500 aa14.93□□□□□ -0.02
ERBB2-222ENST00000584908 C4orf17Q53FE4 359 aa14.93□□□□□ -0.02
ERBB2-222ENST00000584908 CMPK2Q5EBM0 449 aa14.93□□□□□ -0.02
ERBB2-222ENST00000584908 OGFOD2Q6N063 350 aa14.93□□□□□ -0.02
ERBB2-222ENST00000584908 TMEM107Q6UX40 140 aa14.93□□□□□ -0.02
ERBB2-222ENST00000584908 NPSR1Q6W5P4 371 aa14.93□□□□□ -0.02
ERBB2-222ENST00000584908 Q6ZPB1 254 aaPredicted RBP14.93□□□□□ -0.02
ERBB2-222ENST00000584908 LARP4Q71RC2 724 aaKnown RBP eCLIP14.93□□□□□ -0.02
ERBB2-222ENST00000584908 ZNF551Q7Z340 670 aaPredicted RBP14.93□□□□□ -0.02
ERBB2-222ENST00000584908 CAMKMTQ7Z624 323 aa14.93□□□□□ -0.02
ERBB2-222ENST00000584908 SLC34A3Q8N130 599 aa14.93□□□□□ -0.02
ERBB2-222ENST00000584908 GHDCQ8N2G8 530 aa14.93□□□□□ -0.02
ERBB2-222ENST00000584908 NATD1Q8N6N6 113 aa14.93□□□□□ -0.02
ERBB2-222ENST00000584908 ZFP28Q8NHY6 868 aa14.93□□□□□ -0.02
ERBB2-222ENST00000584908 SPPL2AQ8TCT8 520 aa14.93□□□□□ -0.02
ERBB2-222ENST00000584908 HOXB13Q92826 284 aaPredicted RBP14.93□□□□□ -0.02
ERBB2-222ENST00000584908 RELTQ969Z4 430 aa14.93□□□□□ -0.02
ERBB2-222ENST00000584908 COQ8BQ96D53 544 aa14.93□□□□□ -0.02
ERBB2-222ENST00000584908 TSPAN10Q9H1Z9 355 aaPredicted RBP14.93□□□□□ -0.02
ERBB2-222ENST00000584908 IL1RL2Q9HB29 575 aa14.93□□□□□ -0.02
ERBB2-222ENST00000584908 TUBA8Q9NY65 449 aaPredicted RBP14.93□□□□□ -0.02
ERBB2-222ENST00000584908 SH3BP4Q9P0V3 963 aa14.93□□□□□ -0.02
ERBB2-222ENST00000584908 ERRFI1Q9UJM3 462 aaPredicted RBP14.93□□□□□ -0.02
ERBB2-222ENST00000584908 MAPRE3Q9UPY8 281 aa14.93□□□□□ -0.02
ERBB2-222ENST00000584908 OSGIN2Q9Y236 505 aa14.93□□□□□ -0.02
ERBB2-222ENST00000584908 SLC5A6Q9Y289 635 aa14.93□□□□□ -0.02
ERBB2-222ENST00000584908 HMGB1P1B2RPK0 211 aaPredicted RBP14.92□□□□□ -0.02
ERBB2-222ENST00000584908 SLCO1B7G3V0H7 640 aa14.92□□□□□ -0.02
ERBB2-222ENST00000584908 G3V3Y1 287 aa14.92□□□□□ -0.02
ERBB2-222ENST00000584908 TFECO14948 347 aaPredicted RBP14.92□□□□□ -0.02
ERBB2-222ENST00000584908 HDAC3O15379 428 aa14.92□□□□□ -0.02
ERBB2-222ENST00000584908 HS6ST1O60243 411 aa14.92□□□□□ -0.02
ERBB2-222ENST00000584908 TRIM3O75382 744 aaPredicted RBP14.92□□□□□ -0.02
ERBB2-222ENST00000584908 G6PDP11413 515 aa14.92□□□□□ -0.02
ERBB2-222ENST00000584908 RFC3P40938 356 aa14.92□□□□□ -0.02
ERBB2-222ENST00000584908 CLDN8P56748 225 aa14.92□□□□□ -0.02
ERBB2-222ENST00000584908 RPP38P78345 283 aaKnown RBP14.92□□□□□ -0.02
ERBB2-222ENST00000584908 PSG6Q00889 435 aa14.92□□□□□ -0.02
ERBB2-222ENST00000584908 NNATQ16517 81 aa14.92□□□□□ -0.02
ERBB2-222ENST00000584908 NUP54Q7Z3B4 507 aa14.92□□□□□ -0.02
ERBB2-222ENST00000584908 SLC22A16Q86VW1 577 aa14.92□□□□□ -0.02
ERBB2-222ENST00000584908 OR7A2PQ8NGA2 310 aa14.92□□□□□ -0.02
ERBB2-222ENST00000584908 PSMA8Q8TAA3 256 aa14.92□□□□□ -0.02
ERBB2-222ENST00000584908 ZNF75CPQ92670 426 aaPredicted RBP14.92□□□□□ -0.02
ERBB2-222ENST00000584908 HGDQ93099 445 aa14.92□□□□□ -0.02
ERBB2-222ENST00000584908 OMA1Q96E52 524 aa14.92□□□□□ -0.02
ERBB2-222ENST00000584908 SLC35A4Q96G79 324 aa14.92□□□□□ -0.02
ERBB2-222ENST00000584908 ANGPTL4Q9BY76 406 aa14.92□□□□□ -0.02
ERBB2-222ENST00000584908 NUF2Q9BZD4 464 aa14.92□□□□□ -0.02
ERBB2-222ENST00000584908 ATAD3AQ9NVI7 634 aa14.92□□□□□ -0.02
ERBB2-222ENST00000584908 DDX18Q9NVP1 670 aaKnown RBP14.92□□□□□ -0.02
ERBB2-222ENST00000584908 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.92□□□□□ -0.02
ERBB2-222ENST00000584908 FREM3P0C091 2139 aa14.92□□□□□ -0.02
ERBB2-222ENST00000584908 MYO7BQ6PIF6 2116 aa14.92□□□□□ -0.02
ERBB2-222ENST00000584908 OR6C70A6NIJ9 312 aa14.92□□□□□ -0.02
ERBB2-222ENST00000584908 TTC36A6NLP5 189 aa14.92□□□□□ -0.02
ERBB2-222ENST00000584908 ACOT7O00154 380 aa14.92□□□□□ -0.02
ERBB2-222ENST00000584908 SDHDO14521 159 aa14.92□□□□□ -0.02
ERBB2-222ENST00000584908 ABCB7O75027 752 aa14.92□□□□□ -0.02
ERBB2-222ENST00000584908 SASH3O75995 380 aa14.92□□□□□ -0.02
ERBB2-222ENST00000584908 AGFG2O95081 481 aa14.92□□□□□ -0.02
ERBB2-222ENST00000584908 ZIC2O95409 532 aaPredicted RBP14.92□□□□□ -0.02
ERBB2-222ENST00000584908 IGHG3P01860 377 aa14.92□□□□□ -0.02
ERBB2-222ENST00000584908 LAMP1P11279 417 aa14.92□□□□□ -0.02
ERBB2-222ENST00000584908 MAP3K8P41279 467 aa14.92□□□□□ -0.02
ERBB2-222ENST00000584908 CASP3P42574 277 aa14.92□□□□□ -0.02
ERBB2-222ENST00000584908 DIO3P55073 304 aa14.92□□□□□ -0.02
ERBB2-222ENST00000584908 MANFP55145 182 aaKnown RBP14.92□□□□□ -0.02
ERBB2-222ENST00000584908 CORO7P57737 925 aa14.92□□□□□ -0.02
ERBB2-222ENST00000584908 PPIAP62937 165 aaKnown RBP14.92□□□□□ -0.02
ERBB2-222ENST00000584908 PLCXD2Q0VAA5 305 aa14.92□□□□□ -0.02
ERBB2-222ENST00000584908 HSPB3Q12988 150 aa14.92□□□□□ -0.02
ERBB2-222ENST00000584908 SNTA1Q13424 505 aa14.92□□□□□ -0.02
ERBB2-222ENST00000584908 CPTPQ5TA50 214 aa14.92□□□□□ -0.02
ERBB2-222ENST00000584908 PRAMEF20Q5VT98 475 aa14.92□□□□□ -0.02
ERBB2-222ENST00000584908 PRR22Q8IZ63 422 aa14.92□□□□□ -0.02
ERBB2-222ENST00000584908 KRTCAP2Q8N6L1 136 aa14.92□□□□□ -0.02
ERBB2-222ENST00000584908 OR52N2Q8NGI0 321 aa14.92□□□□□ -0.02
ERBB2-222ENST00000584908 OR5M3Q8NGP4 307 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms