RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 DANCRP0C864 163 aa12.7□□□□□ -0.38
CSNK1D-224ENST00000584672 ZNF16P17020 682 aaPredicted RBP12.7□□□□□ -0.38
CSNK1D-224ENST00000584672 ZNF75DP51815 510 aa12.7□□□□□ -0.38
CSNK1D-224ENST00000584672 SUCLG1P53597 346 aaKnown RBP12.7□□□□□ -0.38
CSNK1D-224ENST00000584672 CLDN15P56746 228 aa12.7□□□□□ -0.38
CSNK1D-224ENST00000584672 B3GALT5-AS1P59052 145 aa12.7□□□□□ -0.38
CSNK1D-224ENST00000584672 PON3Q15166 354 aa12.7□□□□□ -0.38
CSNK1D-224ENST00000584672 TMEM249Q2WGJ8 235 aa12.7□□□□□ -0.38
CSNK1D-224ENST00000584672 FAM111BQ6SJ93 734 aa12.7□□□□□ -0.38
CSNK1D-224ENST00000584672 CYP20A1Q6UW02 462 aa12.7□□□□□ -0.38
CSNK1D-224ENST00000584672 STAC2Q6ZMT1 411 aa12.7□□□□□ -0.38
CSNK1D-224ENST00000584672 DNM1P46Q6ZS02 220 aa12.7□□□□□ -0.38
CSNK1D-224ENST00000584672 MYLK4Q86YV6 388 aaPredicted RBP12.7□□□□□ -0.38
CSNK1D-224ENST00000584672 PPIL6Q8IXY8 311 aa12.7□□□□□ -0.38
CSNK1D-224ENST00000584672 LAS2Q8IYD9 372 aa12.7□□□□□ -0.38
CSNK1D-224ENST00000584672 TCAIMQ8N3R3 496 aa12.7□□□□□ -0.38
CSNK1D-224ENST00000584672 ZCCHC7Q8N3Z6 543 aaKnown RBP12.7□□□□□ -0.38
CSNK1D-224ENST00000584672 OR5M1Q8NGP8 315 aa12.7□□□□□ -0.38
CSNK1D-224ENST00000584672 HUS1BQ8NHY5 278 aa12.7□□□□□ -0.38
CSNK1D-224ENST00000584672 SMAP2Q8WU79 429 aaPredicted RBP12.7□□□□□ -0.38
CSNK1D-224ENST00000584672 ANKRD7Q92527 254 aa12.7□□□□□ -0.38
CSNK1D-224ENST00000584672 FBXW5Q969U6 566 aa12.7□□□□□ -0.38
CSNK1D-224ENST00000584672 BRINP2Q9C0B6 783 aa12.7□□□□□ -0.38
CSNK1D-224ENST00000584672 ACTR6Q9GZN1 396 aa12.7□□□□□ -0.38
CSNK1D-224ENST00000584672 SHARPINQ9H0F6 387 aa12.7□□□□□ -0.38
CSNK1D-224ENST00000584672 WDR41Q9HAD4 459 aa12.7□□□□□ -0.38
CSNK1D-224ENST00000584672 LYARQ9NX58 379 aaKnown RBP12.7□□□□□ -0.38
CSNK1D-224ENST00000584672 CHMP2BQ9UQN3 213 aa12.7□□□□□ -0.38
CSNK1D-224ENST00000584672 RNF115Q9Y4L5 304 aa12.7□□□□□ -0.38
CSNK1D-224ENST00000584672 YLPM1P49750 1951 aaKnown RBP12.7□□□□□ -0.38
CSNK1D-224ENST00000584672 ALPK2Q86TB3 2170 aa12.69□□□□□ -0.38
CSNK1D-224ENST00000584672 FAM234BA2RU67 622 aa12.69□□□□□ -0.38
CSNK1D-224ENST00000584672 KCNAB3O43448 404 aa12.69□□□□□ -0.38
CSNK1D-224ENST00000584672 ZIC3O60481 467 aa12.69□□□□□ -0.38
CSNK1D-224ENST00000584672 PEPDP12955 493 aa12.69□□□□□ -0.38
CSNK1D-224ENST00000584672 PTNP21246 168 aa12.69□□□□□ -0.38
CSNK1D-224ENST00000584672 PIK3R1P27986 724 aa12.69□□□□□ -0.38
CSNK1D-224ENST00000584672 GALNSP34059 522 aa12.69□□□□□ -0.38
CSNK1D-224ENST00000584672 GGT5P36269 586 aa12.69□□□□□ -0.38
CSNK1D-224ENST00000584672 CASP9P55211 416 aa12.69□□□□□ -0.38
CSNK1D-224ENST00000584672 HMGCS1Q01581 520 aa12.69□□□□□ -0.38
CSNK1D-224ENST00000584672 ZNF844Q08AG5 666 aa12.69□□□□□ -0.38
CSNK1D-224ENST00000584672 SNTA1Q13424 505 aa12.69□□□□□ -0.38
CSNK1D-224ENST00000584672 OR4D1Q15615 310 aa12.69□□□□□ -0.38
CSNK1D-224ENST00000584672 RAET1LQ5VY80 246 aa12.69□□□□□ -0.38
CSNK1D-224ENST00000584672 OR52E8Q6IFG1 317 aa12.69□□□□□ -0.38
CSNK1D-224ENST00000584672 SULT1C3Q6IMI6 304 aa12.69□□□□□ -0.38
CSNK1D-224ENST00000584672 MRM1Q6IN84 353 aaKnown RBP12.69□□□□□ -0.38
CSNK1D-224ENST00000584672 TMEM81Q6P7N7 255 aa12.69□□□□□ -0.38
CSNK1D-224ENST00000584672 ZNF619Q8N2I2 560 aa12.69□□□□□ -0.38
CSNK1D-224ENST00000584672 UBE2E3Q969T4 207 aa12.69□□□□□ -0.38
CSNK1D-224ENST00000584672 CENPKQ9BS16 269 aa12.69□□□□□ -0.38
CSNK1D-224ENST00000584672 ZNF717Q9BY31 904 aaPredicted RBP12.69□□□□□ -0.38
CSNK1D-224ENST00000584672 PLA2G12AQ9BZM1 189 aa12.69□□□□□ -0.38
CSNK1D-224ENST00000584672 RNF122Q9H9V4 155 aa12.69□□□□□ -0.38
CSNK1D-224ENST00000584672 MEGF8Q7Z7M0 2845 aa12.68□□□□□ -0.38
CSNK1D-224ENST00000584672 A0A0A6YYD5 115 aa12.68□□□□□ -0.38
CSNK1D-224ENST00000584672 H3BML4 177 aa12.68□□□□□ -0.38
CSNK1D-224ENST00000584672 REM1O75628 298 aa12.68□□□□□ -0.38
CSNK1D-224ENST00000584672 AQP8O94778 261 aa12.68□□□□□ -0.38
CSNK1D-224ENST00000584672 PPP3CBP16298 524 aa12.68□□□□□ -0.38
CSNK1D-224ENST00000584672 NAGAP17050 411 aa12.68□□□□□ -0.38
CSNK1D-224ENST00000584672 S1PR1P21453 382 aa12.68□□□□□ -0.38
CSNK1D-224ENST00000584672 BSGP35613 385 aa12.68□□□□□ -0.38
CSNK1D-224ENST00000584672 XKP51811 444 aa12.68□□□□□ -0.38
CSNK1D-224ENST00000584672 CLDN20P56880 219 aa12.68□□□□□ -0.38
CSNK1D-224ENST00000584672 TBCCQ15814 346 aa12.68□□□□□ -0.38
CSNK1D-224ENST00000584672 CTU2Q2VPK5 515 aaKnown RBP12.68□□□□□ -0.38
CSNK1D-224ENST00000584672 RNASEH2BQ5TBB1 312 aaKnown RBP12.68□□□□□ -0.38
CSNK1D-224ENST00000584672 FAM214BQ7L5A3 538 aa12.68□□□□□ -0.38
CSNK1D-224ENST00000584672 ATG4DQ86TL0 474 aaPredicted RBP12.68□□□□□ -0.38
CSNK1D-224ENST00000584672 ZC3HC1Q86WB0 502 aaKnown RBP12.68□□□□□ -0.38
CSNK1D-224ENST00000584672 C17orf47Q8NEP4 570 aa12.68□□□□□ -0.38
CSNK1D-224ENST00000584672 KBTBD8Q8NFY9 601 aa12.68□□□□□ -0.38
CSNK1D-224ENST00000584672 OR4K17Q8NGC6 315 aa12.68□□□□□ -0.38
CSNK1D-224ENST00000584672 ROBO4Q8WZ75 1007 aa12.68□□□□□ -0.38
CSNK1D-224ENST00000584672 TMBIM1Q969X1 311 aa12.68□□□□□ -0.38
CSNK1D-224ENST00000584672 LCORQ96JN0 433 aaPredicted RBP12.68□□□□□ -0.38
CSNK1D-224ENST00000584672 RHNO1Q9BSD3 238 aa12.68□□□□□ -0.38
CSNK1D-224ENST00000584672 CAB39LQ9H9S4 337 aa12.68□□□□□ -0.38
CSNK1D-224ENST00000584672 A0A096LNT2 108 aa12.67□□□□□ -0.38
CSNK1D-224ENST00000584672 UBFD1O14562 309 aaKnown RBP12.67□□□□□ -0.38
CSNK1D-224ENST00000584672 PHGDHO43175 533 aaKnown RBP12.67□□□□□ -0.38
CSNK1D-224ENST00000584672 SPRY1O43609 319 aaPredicted RBP12.67□□□□□ -0.38
CSNK1D-224ENST00000584672 NME6O75414 186 aaPredicted RBP12.67□□□□□ -0.38
CSNK1D-224ENST00000584672 SRD5A1P18405 259 aa12.67□□□□□ -0.38
CSNK1D-224ENST00000584672 GRK2P25098 689 aa12.67□□□□□ -0.38
CSNK1D-224ENST00000584672 ELK3P41970 407 aa12.67□□□□□ -0.38
CSNK1D-224ENST00000584672 GUSBP1Q15486 140 aa12.67□□□□□ -0.38
CSNK1D-224ENST00000584672 TSC22D1Q15714 1073 aa12.67□□□□□ -0.38
CSNK1D-224ENST00000584672 BCL2A1Q16548 175 aa12.67□□□□□ -0.38
CSNK1D-224ENST00000584672 CCDC137Q6PK04 289 aaKnown RBP12.67□□□□□ -0.38
CSNK1D-224ENST00000584672 MILR1Q7Z6M3 343 aa12.67□□□□□ -0.38
CSNK1D-224ENST00000584672 OR7G1Q8NGA0 311 aa12.67□□□□□ -0.38
CSNK1D-224ENST00000584672 HTRA1Q92743 480 aa12.67□□□□□ -0.38
CSNK1D-224ENST00000584672 COL21A1Q96P44 957 aa12.67□□□□□ -0.38
CSNK1D-224ENST00000584672 TACO1Q9BSH4 297 aaKnown RBP12.67□□□□□ -0.38
CSNK1D-224ENST00000584672 CD244Q9BZW8 370 aa12.67□□□□□ -0.38
CSNK1D-224ENST00000584672 DERL2Q9GZP9 239 aa12.67□□□□□ -0.38
CSNK1D-224ENST00000584672 CHODLQ9H9P2 273 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms