RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 MS4A4EQ96PG1 132 aa15.2■□□□□ 0.02
CDK5RAP3-228ENST00000583363 ECSITQ9BQ95 431 aa15.2■□□□□ 0.02
CDK5RAP3-228ENST00000583363 THTPAQ9BU02 230 aa15.2■□□□□ 0.02
CDK5RAP3-228ENST00000583363 SEMA4CQ9C0C4 833 aa15.2■□□□□ 0.02
CDK5RAP3-228ENST00000583363 SERHL2Q9H4I8 314 aa15.2■□□□□ 0.02
CDK5RAP3-228ENST00000583363 ADA2Q9NZK5 511 aa15.2■□□□□ 0.02
CDK5RAP3-228ENST00000583363 PRODH2Q9UF12 536 aa15.2■□□□□ 0.02
CDK5RAP3-228ENST00000583363 CD300AQ9UGN4 299 aa15.2■□□□□ 0.02
CDK5RAP3-228ENST00000583363 PRPF19Q9UMS4 504 aaKnown RBP15.2■□□□□ 0.02
CDK5RAP3-228ENST00000583363 PRAMEF2O60811 474 aa15.19■□□□□ 0.02
CDK5RAP3-228ENST00000583363 MAP3K8P41279 467 aa15.19■□□□□ 0.02
CDK5RAP3-228ENST00000583363 MAN2A2P49641 1150 aa15.19■□□□□ 0.02
CDK5RAP3-228ENST00000583363 PRIM2P49643 509 aa15.19■□□□□ 0.02
CDK5RAP3-228ENST00000583363 SLC26A5P58743 744 aa15.19■□□□□ 0.02
CDK5RAP3-228ENST00000583363 TXNL4AP83876 142 aaKnown RBP15.19■□□□□ 0.02
CDK5RAP3-228ENST00000583363 FADDQ13158 208 aa15.19■□□□□ 0.02
CDK5RAP3-228ENST00000583363 LASP1Q14847 261 aaKnown RBP15.19■□□□□ 0.02
CDK5RAP3-228ENST00000583363 MFSD12Q6NUT3 480 aa15.19■□□□□ 0.02
CDK5RAP3-228ENST00000583363 ANGPTL8Q6UXH0 198 aa15.19■□□□□ 0.02
CDK5RAP3-228ENST00000583363 BNC2Q6ZN30 1099 aaPredicted RBP15.19■□□□□ 0.02
CDK5RAP3-228ENST00000583363 RNF111Q6ZNA4 994 aa15.19■□□□□ 0.02
CDK5RAP3-228ENST00000583363 ZNF771Q7L3S4 317 aaPredicted RBP15.19■□□□□ 0.02
CDK5RAP3-228ENST00000583363 SZRD1Q7Z422 152 aa15.19■□□□□ 0.02
CDK5RAP3-228ENST00000583363 VASH2Q86V25 355 aa15.19■□□□□ 0.02
CDK5RAP3-228ENST00000583363 CALHM3Q86XJ0 350 aa15.19■□□□□ 0.02
CDK5RAP3-228ENST00000583363 RAB43Q86YS6 212 aa15.19■□□□□ 0.02
CDK5RAP3-228ENST00000583363 ARHGAP24Q8N264 748 aa15.19■□□□□ 0.02
CDK5RAP3-228ENST00000583363 APCDD1LQ8NCL9 501 aa15.19■□□□□ 0.02
CDK5RAP3-228ENST00000583363 ZNF248Q8NDW4 579 aa15.19■□□□□ 0.02
CDK5RAP3-228ENST00000583363 OR10A6Q8NH74 314 aa15.19■□□□□ 0.02
CDK5RAP3-228ENST00000583363 C16orf52Q8NHV5 167 aa15.19■□□□□ 0.02
CDK5RAP3-228ENST00000583363 NCLNQ969V3 563 aa15.19■□□□□ 0.02
CDK5RAP3-228ENST00000583363 VPS50Q96JG6 964 aa15.19■□□□□ 0.02
CDK5RAP3-228ENST00000583363 YIPF4Q9BSR8 244 aa15.19■□□□□ 0.02
CDK5RAP3-228ENST00000583363 ACTRT3Q9BYD9 372 aa15.19■□□□□ 0.02
CDK5RAP3-228ENST00000583363 FAF1Q9UNN5 650 aaPredicted RBP15.19■□□□□ 0.02
CDK5RAP3-228ENST00000583363 HEMK1Q9Y5R4 338 aaPredicted RBP15.19■□□□□ 0.02
CDK5RAP3-228ENST00000583363 COL6A6A6NMZ7 2263 aa15.18■□□□□ 0.02
CDK5RAP3-228ENST00000583363 TNFRSF21O75509 655 aa15.18■□□□□ 0.02
CDK5RAP3-228ENST00000583363 BMP2P12643 396 aa15.18■□□□□ 0.02
CDK5RAP3-228ENST00000583363 PGM1P36871 562 aa15.18■□□□□ 0.02
CDK5RAP3-228ENST00000583363 CRATP43155 626 aa15.18■□□□□ 0.02
CDK5RAP3-228ENST00000583363 RPS26P62854 115 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP3-228ENST00000583363 LIPEQ05469 1076 aa15.18■□□□□ 0.02
CDK5RAP3-228ENST00000583363 SRSF6Q13247 344 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP3-228ENST00000583363 SPATS1Q496A3 300 aa15.18■□□□□ 0.02
CDK5RAP3-228ENST00000583363 PIGGQ5H8A4 983 aa15.18■□□□□ 0.02
CDK5RAP3-228ENST00000583363 SAMD4BQ5PRF9 694 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP3-228ENST00000583363 CDC73Q6P1J9 531 aa15.18■□□□□ 0.02
CDK5RAP3-228ENST00000583363 PGM2L1Q6PCE3 622 aa15.18■□□□□ 0.02
CDK5RAP3-228ENST00000583363 SERPINA11Q86U17 422 aa15.18■□□□□ 0.02
CDK5RAP3-228ENST00000583363 HORMAD2Q8N7B1 307 aa15.18■□□□□ 0.02
CDK5RAP3-228ENST00000583363 CDRT4Q8N9R6 151 aa15.18■□□□□ 0.02
CDK5RAP3-228ENST00000583363 M1APQ8TC57 530 aa15.18■□□□□ 0.02
CDK5RAP3-228ENST00000583363 SLC35A4Q96G79 324 aa15.18■□□□□ 0.02
CDK5RAP3-228ENST00000583363 VMP1Q96GC9 406 aa15.18■□□□□ 0.02
CDK5RAP3-228ENST00000583363 LMF2Q9BU23 707 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP3-228ENST00000583363 OR51I1Q9H343 314 aa15.18■□□□□ 0.02
CDK5RAP3-228ENST00000583363 MMADHCQ9H3L0 296 aaPredicted RBP15.18■□□□□ 0.02
CDK5RAP3-228ENST00000583363 FOLH1BQ9HBA9 442 aa15.18■□□□□ 0.02
CDK5RAP3-228ENST00000583363 EQTNQ9NQ60 294 aa15.18■□□□□ 0.02
CDK5RAP3-228ENST00000583363 P4HTMQ9NXG6 502 aa15.18■□□□□ 0.02
CDK5RAP3-228ENST00000583363 GIN1Q9NXP7 522 aa15.18■□□□□ 0.02
CDK5RAP3-228ENST00000583363 GMPR2Q9P2T1 348 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP3-228ENST00000583363 COPS7AQ9UBW8 275 aa15.18■□□□□ 0.02
CDK5RAP3-228ENST00000583363 ZNF223Q9UK11 482 aaPredicted RBP15.18■□□□□ 0.02
CDK5RAP3-228ENST00000583363 PACSIN3Q9UKS6 424 aa15.18■□□□□ 0.02
CDK5RAP3-228ENST00000583363 CFL2Q9Y281 166 aa15.18■□□□□ 0.02
CDK5RAP3-228ENST00000583363 NSG1A0A0A6YYJ2 146 aa15.17■□□□□ 0.02
CDK5RAP3-228ENST00000583363 PRORSD1PA6NEY8 169 aa15.17■□□□□ 0.02
CDK5RAP3-228ENST00000583363 OR6C76A6NM76 312 aa15.17■□□□□ 0.02
CDK5RAP3-228ENST00000583363 ERVH48-1M5A8F1 160 aa15.17■□□□□ 0.02
CDK5RAP3-228ENST00000583363 SOX30O94993 753 aa15.17■□□□□ 0.02
CDK5RAP3-228ENST00000583363 HPP00738 406 aa15.17■□□□□ 0.02
CDK5RAP3-228ENST00000583363 OR12D1P0DN82 309 aa15.17■□□□□ 0.02
CDK5RAP3-228ENST00000583363 ETFAP13804 333 aa15.17■□□□□ 0.02
CDK5RAP3-228ENST00000583363 HSD17B1P14061 328 aa15.17■□□□□ 0.02
CDK5RAP3-228ENST00000583363 GSK3BP49841 420 aa15.17■□□□□ 0.02
CDK5RAP3-228ENST00000583363 CEACAM7Q14002 265 aa15.17■□□□□ 0.02
CDK5RAP3-228ENST00000583363 MYBPC3Q14896 1274 aa15.17■□□□□ 0.02
CDK5RAP3-228ENST00000583363 ADRM1Q16186 407 aa15.17■□□□□ 0.02
CDK5RAP3-228ENST00000583363 EXT1Q16394 746 aa15.17■□□□□ 0.02
CDK5RAP3-228ENST00000583363 PLAG1Q6DJT9 500 aa15.17■□□□□ 0.02
CDK5RAP3-228ENST00000583363 TNFAIP8L2Q6P589 184 aaPredicted RBP15.17■□□□□ 0.02
CDK5RAP3-228ENST00000583363 NET1Q7Z628 596 aaPredicted RBP15.17■□□□□ 0.02
CDK5RAP3-228ENST00000583363 MRGPREQ86SM8 312 aa15.17■□□□□ 0.02
CDK5RAP3-228ENST00000583363 FBXW8Q8N3Y1 598 aa15.17■□□□□ 0.02
CDK5RAP3-228ENST00000583363 SLC16A11Q8NCK7 471 aa15.17■□□□□ 0.02
CDK5RAP3-228ENST00000583363 ELP5Q8TE02 316 aa15.17■□□□□ 0.02
CDK5RAP3-228ENST00000583363 ADAMTS15Q8TE58 950 aa15.17■□□□□ 0.02
CDK5RAP3-228ENST00000583363 KCNE4Q8WWG9 221 aa15.17■□□□□ 0.02
CDK5RAP3-228ENST00000583363 ADIPOR1Q96A54 375 aa15.17■□□□□ 0.02
CDK5RAP3-228ENST00000583363 CLPTM1LQ96KA5 538 aa15.17■□□□□ 0.02
CDK5RAP3-228ENST00000583363 VSTM2LQ96N03 204 aa15.17■□□□□ 0.02
CDK5RAP3-228ENST00000583363 IP6K3Q96PC2 410 aa15.17■□□□□ 0.02
CDK5RAP3-228ENST00000583363 OR7D2Q96RA2 312 aa15.17■□□□□ 0.02
CDK5RAP3-228ENST00000583363 DPH1Q9BZG8 443 aa15.17■□□□□ 0.02
CDK5RAP3-228ENST00000583363 PIF1Q9H611 641 aa15.17■□□□□ 0.02
CDK5RAP3-228ENST00000583363 CPNE5Q9HCH3 593 aa15.17■□□□□ 0.02
CDK5RAP3-228ENST00000583363 DTX4Q9Y2E6 619 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms