RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 VSTM2LQ96N03 204 aa11.59□□□□□ -0.55
SMARCE1-218ENST00000582955 DOHHQ9BU89 302 aa11.59□□□□□ -0.55
SMARCE1-218ENST00000582955 NUF2Q9BZD4 464 aa11.59□□□□□ -0.55
SMARCE1-218ENST00000582955 DEFB127Q9H1M4 99 aa11.59□□□□□ -0.55
SMARCE1-218ENST00000582955 MANSC1Q9H8J5 431 aa11.59□□□□□ -0.55
SMARCE1-218ENST00000582955 AKTIPQ9H8T0 292 aa11.59□□□□□ -0.55
SMARCE1-218ENST00000582955 IL1RL2Q9HB29 575 aa11.59□□□□□ -0.55
SMARCE1-218ENST00000582955 THAP1Q9NVV9 213 aa11.59□□□□□ -0.55
SMARCE1-218ENST00000582955 HAO1Q9UJM8 370 aa11.59□□□□□ -0.55
SMARCE1-218ENST00000582955 CNOT11Q9UKZ1 510 aaKnown RBP11.59□□□□□ -0.55
SMARCE1-218ENST00000582955 BOKQ9UMX3 212 aaPredicted RBP11.59□□□□□ -0.55
SMARCE1-218ENST00000582955 GPR55Q9Y2T6 319 aaPredicted RBP11.59□□□□□ -0.55
SMARCE1-218ENST00000582955 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.59□□□□□ -0.55
SMARCE1-218ENST00000582955 A0A1B0GUH1 482 aa11.58□□□□□ -0.56
SMARCE1-218ENST00000582955 PLOD2O00469 737 aa11.58□□□□□ -0.56
SMARCE1-218ENST00000582955 ZNHIT1O43257 154 aa11.58□□□□□ -0.56
SMARCE1-218ENST00000582955 PDE9AO76083 593 aa11.58□□□□□ -0.56
SMARCE1-218ENST00000582955 KITP10721 976 aa11.58□□□□□ -0.56
SMARCE1-218ENST00000582955 G6PDP11413 515 aa11.58□□□□□ -0.56
SMARCE1-218ENST00000582955 ABOP16442 354 aa11.58□□□□□ -0.56
SMARCE1-218ENST00000582955 NAGAP17050 411 aa11.58□□□□□ -0.56
SMARCE1-218ENST00000582955 EFNA1P20827 205 aaPredicted RBP11.58□□□□□ -0.56
SMARCE1-218ENST00000582955 KRT20P35900 424 aa11.58□□□□□ -0.56
SMARCE1-218ENST00000582955 CORO7P57737 925 aa11.58□□□□□ -0.56
SMARCE1-218ENST00000582955 EMX2Q04743 252 aa11.58□□□□□ -0.56
SMARCE1-218ENST00000582955 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.58□□□□□ -0.566e-7■■□□□ 13.5
SMARCE1-218ENST00000582955 TTMPQ5BVD1 217 aa11.58□□□□□ -0.56
SMARCE1-218ENST00000582955 TBCELQ5QJ74 424 aa11.58□□□□□ -0.56
SMARCE1-218ENST00000582955 BNC2Q6ZN30 1099 aaPredicted RBP11.58□□□□□ -0.56
SMARCE1-218ENST00000582955 RGS9BPQ6ZS82 235 aa11.58□□□□□ -0.56
SMARCE1-218ENST00000582955 SZRD1Q7Z422 152 aa11.58□□□□□ -0.56
SMARCE1-218ENST00000582955 FJX1Q86VR8 437 aa11.58□□□□□ -0.56
SMARCE1-218ENST00000582955 SLC44A2Q8IWA5 706 aaPredicted RBP11.58□□□□□ -0.56
SMARCE1-218ENST00000582955 SLC34A3Q8N130 599 aa11.58□□□□□ -0.56
SMARCE1-218ENST00000582955 TMEM251Q8N6I4 163 aa11.58□□□□□ -0.56
SMARCE1-218ENST00000582955 OR7A2PQ8NGA2 310 aa11.58□□□□□ -0.56
SMARCE1-218ENST00000582955 OR52N2Q8NGI0 321 aa11.58□□□□□ -0.56
SMARCE1-218ENST00000582955 RAB3IL1Q8TBN0 382 aa11.58□□□□□ -0.56
SMARCE1-218ENST00000582955 SPPL2AQ8TCT8 520 aa11.58□□□□□ -0.56
SMARCE1-218ENST00000582955 TMBIM1Q969X1 311 aa11.58□□□□□ -0.56
SMARCE1-218ENST00000582955 ELP4Q96EB1 424 aa11.58□□□□□ -0.56
SMARCE1-218ENST00000582955 BTBD9Q96Q07 612 aa11.58□□□□□ -0.56
SMARCE1-218ENST00000582955 METTL7AQ9H8H3 244 aa11.58□□□□□ -0.56
SMARCE1-218ENST00000582955 NOP53Q9NZM5 478 aaKnown RBP11.58□□□□□ -0.56
SMARCE1-218ENST00000582955 MARCOQ9UEW3 520 aaPredicted RBP11.58□□□□□ -0.56
SMARCE1-218ENST00000582955 ATP6V1HQ9UI12 483 aa11.58□□□□□ -0.56
SMARCE1-218ENST00000582955 C19orf53Q9UNZ5 99 aaPredicted RBP11.58□□□□□ -0.56
SMARCE1-218ENST00000582955 OR10H1Q9Y4A9 318 aa11.58□□□□□ -0.56
SMARCE1-218ENST00000582955 POLEQ07864 2286 aa11.58□□□□□ -0.56
SMARCE1-218ENST00000582955 EML6Q6ZMW3 1958 aa11.58□□□□□ -0.56
SMARCE1-218ENST00000582955 HIVEP3Q5T1R4 2406 aa11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 A0A1B0GTH9 108 aa11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 UPK1AO00322 258 aa11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 TO15178 435 aa11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 SNNO75324 88 aaPredicted RBP11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 REM1O75628 298 aa11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 GLSO94925 669 aaPredicted RBP11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 ABCB1P08183 1280 aaPredicted RBP11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 RNF224P0DH78 156 aa11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 CT45A8P0DMV1 189 aa11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 CT45A9P0DMV2 189 aa11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 PRPS1L1P21108 318 aa11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 IL12BP29460 328 aa11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 MAGEA5P43359 124 aa11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 MASP1P48740 699 aa11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 CDK9P50750 372 aaKnown RBP11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 PRKAG1P54619 331 aa11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 PER3P56645 1201 aa11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 FOXO1Q12778 655 aa11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 ZNHIT3Q15649 155 aaPredicted RBP11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 SMU1Q2TAY7 513 aa11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 CT45A2Q5DJT8 189 aa11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 CPTPQ5TA50 214 aa11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 TMEM198Q66K66 360 aa11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 BICRALQ6AI39 1079 aa11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 DESI1Q6ICB0 168 aa11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 PAOXQ6QHF9 649 aa11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 NPSR1Q6W5P4 371 aa11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 NUP54Q7Z3B4 507 aa11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 SPPL2CQ8IUH8 684 aa11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 OR2L13Q8N349 312 aa11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 FAM109AQ8N4B1 249 aa11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 KRTCAP2Q8N6L1 136 aa11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 ZNF597Q96LX8 424 aa11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 RILPQ96NA2 401 aa11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 SECISBP2Q96T21 854 aaKnown RBP11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 PRPF18Q99633 342 aaKnown RBP11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 VIPAS39Q9H9C1 493 aa11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 PROK2Q9HC23 129 aa11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 ZFP64Q9NPA5 681 aa11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 EQTNQ9NQ60 294 aa11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 ACSS1Q9NUB1 689 aaPredicted RBP11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 ATAD3AQ9NVI7 634 aa11.57□□□□□ -0.56
SMARCE1-218ENST00000582955 A0A1W2PRB8 838 aa11.56□□□□□ -0.56
SMARCE1-218ENST00000582955 ANKRD33BA6NCL7 494 aa11.56□□□□□ -0.56
SMARCE1-218ENST00000582955 CCL21O00585 134 aa11.56□□□□□ -0.56
SMARCE1-218ENST00000582955 UGT2B11O75310 529 aa11.56□□□□□ -0.56
SMARCE1-218ENST00000582955 SNX4O95219 450 aa11.56□□□□□ -0.56
SMARCE1-218ENST00000582955 LDLRP01130 860 aa11.56□□□□□ -0.56
SMARCE1-218ENST00000582955 LAMP1P11279 417 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms