RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 RPRD1BQ9NQG5 326 aaKnown RBP12.89□□□□□ -0.35
RNF43-205ENST00000581868 CACNB4O00305 520 aaPredicted RBP12.89□□□□□ -0.35
RNF43-205ENST00000581868 HMGN2P05204 90 aaKnown RBP12.89□□□□□ -0.35
RNF43-205ENST00000581868 CISD3P0C7P0 127 aa12.89□□□□□ -0.35
RNF43-205ENST00000581868 CCNYL3P0C7X3 344 aa12.89□□□□□ -0.35
RNF43-205ENST00000581868 ADRB3P13945 408 aa12.89□□□□□ -0.35
RNF43-205ENST00000581868 PTNP21246 168 aa12.89□□□□□ -0.35
RNF43-205ENST00000581868 GABRA5P31644 462 aa12.89□□□□□ -0.35
RNF43-205ENST00000581868 FUT5Q11128 374 aa12.89□□□□□ -0.35
RNF43-205ENST00000581868 TATDN3Q17R31 274 aa12.89□□□□□ -0.35
RNF43-205ENST00000581868 ZNF697Q5TEC3 545 aa12.89□□□□□ -0.35
RNF43-205ENST00000581868 PLPP4Q5VZY2 271 aa12.89□□□□□ -0.35
RNF43-205ENST00000581868 KIAA1161Q6NSJ0 714 aa12.89□□□□□ -0.35
RNF43-205ENST00000581868 SLC39A5Q6ZMH5 540 aa12.89□□□□□ -0.35
RNF43-205ENST00000581868 RRM2BQ7LG56 351 aa12.89□□□□□ -0.35
RNF43-205ENST00000581868 CCDC116Q8IYX3 515 aa12.89□□□□□ -0.35
RNF43-205ENST00000581868 NLGN4YQ8NFZ3 816 aaPredicted RBP12.89□□□□□ -0.35
RNF43-205ENST00000581868 OR5K2Q8NHB8 316 aa12.89□□□□□ -0.35
RNF43-205ENST00000581868 ZG16BQ96DA0 208 aa12.89□□□□□ -0.35
RNF43-205ENST00000581868 NECTIN4Q96NY8 510 aa12.89□□□□□ -0.35
RNF43-205ENST00000581868 GDF15Q99988 308 aa12.89□□□□□ -0.35
RNF43-205ENST00000581868 MED18Q9BUE0 208 aa12.89□□□□□ -0.35
RNF43-205ENST00000581868 KLHL31Q9H511 634 aa12.89□□□□□ -0.35
RNF43-205ENST00000581868 XKR8Q9H6D3 395 aa12.89□□□□□ -0.35
RNF43-205ENST00000581868 FGF20Q9NP95 211 aaPredicted RBP12.89□□□□□ -0.35
RNF43-205ENST00000581868 SLC35C2Q9NQQ7 365 aa12.89□□□□□ -0.35
RNF43-205ENST00000581868 IL20RAQ9UHF4 553 aa12.89□□□□□ -0.35
RNF43-205ENST00000581868 MAU2Q9Y6X3 613 aa12.89□□□□□ -0.35
RNF43-205ENST00000581868 SNTNA6NMZ2 147 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 PRRT4C9JH25 899 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 KIAA0355O15063 1070 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 PGRMC2O15173 223 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 VEGFDO43915 354 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 ACRP10323 421 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 CELP19835 753 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 GSTM3P21266 225 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 MAP2K3P46734 347 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 AVPR1BP47901 424 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 KHKP50053 298 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 ERVFC1P60507 584 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 REEP5Q00765 189 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 SLC30A6Q6NXT4 461 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 SYCE2Q6PIF2 218 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 ZNF793Q6ZN11 406 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 ANKRD33Q7Z3H0 272 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 MARCH9Q86YJ5 346 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 LINC00471Q8N535 108 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 BBS10Q8TAM1 723 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 OTULINQ96BN8 352 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 SLC38A2Q96QD8 506 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 ARHGAP9Q9BRR9 750 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 SPATA5L1Q9BVQ7 753 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 TRMT61BQ9BVS5 477 aaKnown RBP12.88□□□□□ -0.35
RNF43-205ENST00000581868 WASH6PQ9NQA3 447 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 TMEM39AQ9NV64 488 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 NLKQ9UBE8 527 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 GPR55Q9Y2T6 319 aaPredicted RBP12.88□□□□□ -0.35
RNF43-205ENST00000581868 EXOSC1Q9Y3B2 195 aaKnown RBP12.88□□□□□ -0.35
RNF43-205ENST00000581868 C5orf42Q9H799 3197 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 C2orf92A0A1B0GVN3 265 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 A0A1W2PS29 197 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 CPNE3O75131 537 aaKnown RBP12.88□□□□□ -0.35
RNF43-205ENST00000581868 UBXN7O94888 489 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 PCCBP05166 539 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 NTSP30990 170 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 SLC1A3P43003 542 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 CDH11P55287 796 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 PPP3R1P63098 170 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 ZNF791Q3KP31 576 aaPredicted RBP12.88□□□□□ -0.35
RNF43-205ENST00000581868 MINDY4Q4G0A6 757 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 ZNF311Q5JNZ3 666 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 PPP2R2DQ66LE6 453 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 KIAA1211LQ6NV74 962 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 CACUL1Q86Y37 369 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 YIPF7Q8N8F6 280 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 LRRC3BQ96PB8 259 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 LGR4Q9BXB1 951 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 B3GAT2Q9NPZ5 323 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 LRRK1Q38SD2 2015 aa12.88□□□□□ -0.35
RNF43-205ENST00000581868 TCF20Q9UGU0 1960 aaKnown RBP12.87□□□□□ -0.35
RNF43-205ENST00000581868 FAM240BA0A1B0GVZ2 78 aa12.87□□□□□ -0.35
RNF43-205ENST00000581868 ABHD14A-ACY1A0A1B0GW23 586 aa12.87□□□□□ -0.35
RNF43-205ENST00000581868 CD8B2A6NJW9 211 aa12.87□□□□□ -0.35
RNF43-205ENST00000581868 SEC14L5O43304 696 aa12.87□□□□□ -0.35
RNF43-205ENST00000581868 NDUFB5O43674 189 aa12.87□□□□□ -0.35
RNF43-205ENST00000581868 CD8BP10966 210 aa12.87□□□□□ -0.35
RNF43-205ENST00000581868 ADH5P11766 374 aa12.87□□□□□ -0.35
RNF43-205ENST00000581868 GNSP15586 552 aa12.87□□□□□ -0.35
RNF43-205ENST00000581868 ATP6V1E1P36543 226 aa12.87□□□□□ -0.35
RNF43-205ENST00000581868 MLLT3P42568 568 aaPredicted RBP12.87□□□□□ -0.35
RNF43-205ENST00000581868 CLCNKAP51800 687 aa12.87□□□□□ -0.35
RNF43-205ENST00000581868 UBE3AQ05086 875 aa12.87□□□□□ -0.35
RNF43-205ENST00000581868 CCDC85BQ15834 202 aaPredicted RBP12.87□□□□□ -0.35
RNF43-205ENST00000581868 C9orf64Q5T6V5 341 aa12.87□□□□□ -0.35
RNF43-205ENST00000581868 TMEM107Q6UX40 140 aa12.87□□□□□ -0.35
RNF43-205ENST00000581868 VRK2Q86Y07 508 aa12.87□□□□□ -0.35
RNF43-205ENST00000581868 SFTPA1Q8IWL2 248 aa12.87□□□□□ -0.35
RNF43-205ENST00000581868 GNPDA2Q8TDQ7 276 aa12.87□□□□□ -0.35
RNF43-205ENST00000581868 OR8D1Q8WZ84 308 aa12.87□□□□□ -0.35
RNF43-205ENST00000581868 AICDAQ9GZX7 198 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms