RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 DKKL1Q9UK85 242 aa11.49□□□□□ -0.57
SS18-219ENST00000581570 FBXL2Q9UKC9 423 aa11.49□□□□□ -0.57
SS18-219ENST00000581570 PROCRQ9UNN8 238 aa11.49□□□□□ -0.57
SS18-219ENST00000581570 CFL2Q9Y281 166 aa11.49□□□□□ -0.57
SS18-219ENST00000581570 MRPS18CQ9Y3D5 142 aaKnown RBP11.49□□□□□ -0.57
SS18-219ENST00000581570 SONP18583 2426 aaKnown RBP11.48□□□□□ -0.57
SS18-219ENST00000581570 NBEAL1Q6ZS30 2694 aa11.48□□□□□ -0.57
SS18-219ENST00000581570 A8MV72 311 aaPredicted RBP11.48□□□□□ -0.57
SS18-219ENST00000581570 ZIC3O60481 467 aa11.48□□□□□ -0.57
SS18-219ENST00000581570 WISP3O95389 354 aaPredicted RBP11.48□□□□□ -0.57
SS18-219ENST00000581570 FAM157CP0CG43 387 aa11.48□□□□□ -0.57
SS18-219ENST00000581570 PEPDP12955 493 aa11.48□□□□□ -0.57
SS18-219ENST00000581570 PPP3CBP16298 524 aa11.48□□□□□ -0.57
SS18-219ENST00000581570 S1PR1P21453 382 aa11.48□□□□□ -0.57
SS18-219ENST00000581570 FNTAP49354 379 aa11.48□□□□□ -0.57
SS18-219ENST00000581570 ATP6V0D1P61421 351 aa11.48□□□□□ -0.57
SS18-219ENST00000581570 HMGCS1Q01581 520 aa11.48□□□□□ -0.57
SS18-219ENST00000581570 POU4F1Q01851 419 aa11.48□□□□□ -0.57
SS18-219ENST00000581570 OCRLQ01968 901 aa11.48□□□□□ -0.57
SS18-219ENST00000581570 FRG1Q14331 258 aaKnown RBP11.48□□□□□ -0.57
SS18-219ENST00000581570 EXOC3L2Q2M3D2 409 aa11.48□□□□□ -0.57
SS18-219ENST00000581570 MYLK4Q86YV6 388 aaPredicted RBP11.48□□□□□ -0.57
SS18-219ENST00000581570 SPC24Q8NBT2 197 aa11.48□□□□□ -0.57
SS18-219ENST00000581570 AKAP1Q92667 903 aaKnown RBP eCLIP11.48□□□□□ -0.57
SS18-219ENST00000581570 TMCO6Q96DC7 493 aa11.48□□□□□ -0.57
SS18-219ENST00000581570 PLPPR2Q96GM1 343 aa11.48□□□□□ -0.57
SS18-219ENST00000581570 PBKQ96KB5 322 aa11.48□□□□□ -0.57
SS18-219ENST00000581570 NAP1L3Q99457 506 aaPredicted RBP11.48□□□□□ -0.57
SS18-219ENST00000581570 ITPAQ9BY32 194 aa11.48□□□□□ -0.57
SS18-219ENST00000581570 OPTCQ9UBM4 332 aa11.48□□□□□ -0.57
SS18-219ENST00000581570 BCAP29Q9UHQ4 241 aa11.48□□□□□ -0.57
SS18-219ENST00000581570 TEX264Q9Y6I9 313 aa11.48□□□□□ -0.57
SS18-219ENST00000581570 MED12LQ86YW9 2145 aa11.48□□□□□ -0.57
SS18-219ENST00000581570 USF3Q68DE3 2245 aa11.48□□□□□ -0.57
SS18-219ENST00000581570 K7EPI3 171 aa11.47□□□□□ -0.57
SS18-219ENST00000581570 OVOL3O00110 214 aa11.47□□□□□ -0.57
SS18-219ENST00000581570 ACOX3O15254 700 aa11.47□□□□□ -0.57
SS18-219ENST00000581570 PHGDHO43175 533 aaKnown RBP11.47□□□□□ -0.57
SS18-219ENST00000581570 TNFRSF21O75509 655 aa11.47□□□□□ -0.57
SS18-219ENST00000581570 GBAP04062 536 aa11.47□□□□□ -0.57
SS18-219ENST00000581570 CPMP14384 443 aa11.47□□□□□ -0.57
SS18-219ENST00000581570 PORP16435 677 aaPredicted RBP11.47□□□□□ -0.57
SS18-219ENST00000581570 DPP4P27487 766 aa11.47□□□□□ -0.57
SS18-219ENST00000581570 ACVR1BP36896 505 aa11.47□□□□□ -0.57
SS18-219ENST00000581570 EEFSECP57772 596 aaKnown RBP11.47□□□□□ -0.57
SS18-219ENST00000581570 PHEXP78562 749 aa11.47□□□□□ -0.57
SS18-219ENST00000581570 KRTAP24-1Q3LI83 254 aa11.47□□□□□ -0.57
SS18-219ENST00000581570 OR5M10Q6IEU7 315 aa11.47□□□□□ -0.57
SS18-219ENST00000581570 FAM111BQ6SJ93 734 aa11.47□□□□□ -0.57
SS18-219ENST00000581570 ZNF662Q6ZS27 426 aa11.47□□□□□ -0.57
SS18-219ENST00000581570 ADCY4Q8NFM4 1077 aa11.47□□□□□ -0.57
SS18-219ENST00000581570 LRRC39Q96DD0 335 aa11.47□□□□□ -0.57
SS18-219ENST00000581570 TSPAN17Q96FV3 270 aa11.47□□□□□ -0.57
SS18-219ENST00000581570 TMEM204Q9BSN7 226 aa11.47□□□□□ -0.57
SS18-219ENST00000581570 PINK1Q9BXM7 581 aa11.47□□□□□ -0.57
SS18-219ENST00000581570 BRINP2Q9C0B6 783 aa11.47□□□□□ -0.57
SS18-219ENST00000581570 CAB39LQ9H9S4 337 aa11.47□□□□□ -0.57
SS18-219ENST00000581570 RNF122Q9H9V4 155 aa11.47□□□□□ -0.57
SS18-219ENST00000581570 NSMCE4AQ9NXX6 385 aa11.47□□□□□ -0.57
SS18-219ENST00000581570 MTO1Q9Y2Z2 717 aaKnown RBP11.47□□□□□ -0.57
SS18-219ENST00000581570 TSC22D4Q9Y3Q8 395 aa11.47□□□□□ -0.57
SS18-219ENST00000581570 PCDHGA11Q9Y5H2 935 aa11.47□□□□□ -0.57
SS18-219ENST00000581570 EFCAB8A8MWE9 144 aa11.46□□□□□ -0.57
SS18-219ENST00000581570 REM1O75628 298 aa11.46□□□□□ -0.57
SS18-219ENST00000581570 NEK2P51955 445 aa11.46□□□□□ -0.57
SS18-219ENST00000581570 CLDN15P56746 228 aa11.46□□□□□ -0.57
SS18-219ENST00000581570 B3GALT5-AS1P59052 145 aa11.46□□□□□ -0.57
SS18-219ENST00000581570 MAP4K2Q12851 820 aa11.46□□□□□ -0.57
SS18-219ENST00000581570 ILF2Q12905 390 aaKnown RBP11.46□□□□□ -0.57
SS18-219ENST00000581570 CUL3Q13618 768 aa11.46□□□□□ -0.57
SS18-219ENST00000581570 EXOSC7Q15024 291 aaKnown RBP11.46□□□□□ -0.57
SS18-219ENST00000581570 NUDT13Q86X67 352 aa11.46□□□□□ -0.57
SS18-219ENST00000581570 WFDC8Q8IUA0 241 aa11.46□□□□□ -0.57
SS18-219ENST00000581570 ANKMY2Q8IV38 441 aa11.46□□□□□ -0.57
SS18-219ENST00000581570 ZNF454Q8N9F8 522 aa11.46□□□□□ -0.57
SS18-219ENST00000581570 FNDC9Q8TBE3 224 aa11.46□□□□□ -0.57
SS18-219ENST00000581570 GTPBP3Q969Y2 492 aaKnown RBP11.46□□□□□ -0.57
SS18-219ENST00000581570 COL21A1Q96P44 957 aa11.46□□□□□ -0.57
SS18-219ENST00000581570 MCMBPQ9BTE3 642 aa11.46□□□□□ -0.57
SS18-219ENST00000581570 SLCO5A1Q9H2Y9 848 aa11.46□□□□□ -0.57
SS18-219ENST00000581570 MOCS1Q9NZB8 636 aa11.46□□□□□ -0.57
SS18-219ENST00000581570 NUDT4Q9NZJ9 180 aa11.46□□□□□ -0.57
SS18-219ENST00000581570 ZNF175Q9Y473 711 aa11.46□□□□□ -0.57
SS18-219ENST00000581570 UQCRHLA0A096LP55 91 aa11.45□□□□□ -0.58
SS18-219ENST00000581570 OR6C70A6NIJ9 312 aa11.45□□□□□ -0.58
SS18-219ENST00000581570 H0YC42 278 aa11.45□□□□□ -0.58
SS18-219ENST00000581570 PGRMC1O00264 195 aaKnown RBP11.45□□□□□ -0.58
SS18-219ENST00000581570 TO15178 435 aa11.45□□□□□ -0.58
SS18-219ENST00000581570 DRD5P21918 477 aa11.45□□□□□ -0.58
SS18-219ENST00000581570 GRK2P25098 689 aa11.45□□□□□ -0.58
SS18-219ENST00000581570 CDKN1AP38936 164 aa11.45□□□□□ -0.58
SS18-219ENST00000581570 PPICP45877 212 aa11.45□□□□□ -0.58
SS18-219ENST00000581570 SUCLG1P53597 346 aaKnown RBP11.45□□□□□ -0.58
SS18-219ENST00000581570 TPD52P55327 224 aaPredicted RBP11.45□□□□□ -0.58
SS18-219ENST00000581570 DSCR4P56555 118 aaPredicted RBP11.45□□□□□ -0.58
SS18-219ENST00000581570 MGAT2Q10469 447 aa11.45□□□□□ -0.58
SS18-219ENST00000581570 MORF4L2Q15014 288 aa11.45□□□□□ -0.58
SS18-219ENST00000581570 PON3Q15166 354 aa11.45□□□□□ -0.58
SS18-219ENST00000581570 PRICKLE4Q2TBC4 344 aa11.45□□□□□ -0.58
SS18-219ENST00000581570 LIPJQ5W064 366 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms