RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 RFC2P35250 354 aa3.69□□□□□ -1.82
SMCHD1-205ENST00000581383 HMGCLP35914 325 aa3.69□□□□□ -1.82
SMCHD1-205ENST00000581383 CD86P42081 329 aa3.69□□□□□ -1.82
SMCHD1-205ENST00000581383 BRCC3P46736 316 aa3.69□□□□□ -1.82
SMCHD1-205ENST00000581383 PGFP49763 221 aa3.69□□□□□ -1.82
SMCHD1-205ENST00000581383 MFAP2P55001 183 aa3.69□□□□□ -1.82
SMCHD1-205ENST00000581383 SRYQ05066 204 aa3.69□□□□□ -1.82
SMCHD1-205ENST00000581383 BNIP1Q12981 228 aa3.69□□□□□ -1.82
SMCHD1-205ENST00000581383 CRMP1Q14194 572 aa3.69□□□□□ -1.82
SMCHD1-205ENST00000581383 INAQ16352 499 aa3.69□□□□□ -1.82
SMCHD1-205ENST00000581383 LRIT3Q3SXY7 679 aa3.69□□□□□ -1.82
SMCHD1-205ENST00000581383 ACSF3Q4G176 576 aaPredicted RBP3.69□□□□□ -1.82
SMCHD1-205ENST00000581383 C14orf28Q4W4Y0 310 aa3.69□□□□□ -1.82
SMCHD1-205ENST00000581383 ATRAIDQ6UW56 229 aa3.69□□□□□ -1.82
SMCHD1-205ENST00000581383 PRSS48Q7RTY5 328 aa3.69□□□□□ -1.82
SMCHD1-205ENST00000581383 P4HA3Q7Z4N8 544 aa3.69□□□□□ -1.82
SMCHD1-205ENST00000581383 CENPSQ8N2Z9 138 aa3.69□□□□□ -1.82
SMCHD1-205ENST00000581383 BEST4Q8NFU0 473 aa3.69□□□□□ -1.82
SMCHD1-205ENST00000581383 TSPAN18Q96SJ8 248 aa3.69□□□□□ -1.82
SMCHD1-205ENST00000581383 FAM173AQ9BQD7 235 aa3.69□□□□□ -1.82
SMCHD1-205ENST00000581383 TSPY26PQ9H489 355 aa3.69□□□□□ -1.82
SMCHD1-205ENST00000581383 MLXQ9UH92 298 aa3.69□□□□□ -1.82
SMCHD1-205ENST00000581383 CIDEBQ9UHD4 219 aa3.69□□□□□ -1.82
SMCHD1-205ENST00000581383 ZNF490Q9ULM2 529 aaPredicted RBP3.69□□□□□ -1.82
SMCHD1-205ENST00000581383 RNF24Q9Y225 148 aa3.69□□□□□ -1.82
SMCHD1-205ENST00000581383 TRABD2BA6NFA1 517 aa3.68□□□□□ -1.82
SMCHD1-205ENST00000581383 SDC3O75056 442 aa3.68□□□□□ -1.82
SMCHD1-205ENST00000581383 SH3BGRLO75368 114 aa3.68□□□□□ -1.82
SMCHD1-205ENST00000581383 AKR7A3O95154 331 aa3.68□□□□□ -1.82
SMCHD1-205ENST00000581383 FOLR2P14207 255 aa3.68□□□□□ -1.82
SMCHD1-205ENST00000581383 GATA1P15976 413 aaPredicted RBP3.68□□□□□ -1.82
SMCHD1-205ENST00000581383 ARHGDIAP52565 204 aa3.68□□□□□ -1.82
SMCHD1-205ENST00000581383 HERVK_113P63132 956 aa3.68□□□□□ -1.82
SMCHD1-205ENST00000581383 ERVK-8P63133 956 aa3.68□□□□□ -1.82
SMCHD1-205ENST00000581383 RFTN1Q14699 578 aaPredicted RBP3.68□□□□□ -1.82
SMCHD1-205ENST00000581383 C17orf58Q2M2W7 97 aa3.68□□□□□ -1.82
SMCHD1-205ENST00000581383 BEND6Q5SZJ8 279 aaPredicted RBP3.68□□□□□ -1.82
SMCHD1-205ENST00000581383 LINC00242Q5T6M2 205 aa3.68□□□□□ -1.82
SMCHD1-205ENST00000581383 SEL1L3Q68CR1 1132 aa3.68□□□□□ -1.82
SMCHD1-205ENST00000581383 UNC5DQ6UXZ4 953 aa3.68□□□□□ -1.82
SMCHD1-205ENST00000581383 SYVN1Q86TM6 617 aa3.68□□□□□ -1.82
SMCHD1-205ENST00000581383 HIPK1Q86Z02 1210 aa3.68□□□□□ -1.82
SMCHD1-205ENST00000581383 ARFGAP2Q8N6H7 521 aa3.68□□□□□ -1.82
SMCHD1-205ENST00000581383 OR52B4Q8NGK2 314 aa3.68□□□□□ -1.82
SMCHD1-205ENST00000581383 OR6T1Q8NGN1 323 aa3.68□□□□□ -1.82
SMCHD1-205ENST00000581383 FLVCR1-AS1Q8TAF5 88 aa3.68□□□□□ -1.82
SMCHD1-205ENST00000581383 DLX4Q92988 240 aaPredicted RBP3.68□□□□□ -1.82
SMCHD1-205ENST00000581383 ERVK-6Q9BXR3 956 aa3.68□□□□□ -1.82
SMCHD1-205ENST00000581383 ACTR8Q9H981 624 aa3.68□□□□□ -1.82
SMCHD1-205ENST00000581383 RPS10P5Q9NQ39 176 aa3.68□□□□□ -1.82
SMCHD1-205ENST00000581383 FAM114A2Q9NRY5 505 aa3.68□□□□□ -1.82
SMCHD1-205ENST00000581383 CENPMQ9NSP4 180 aa3.68□□□□□ -1.82
SMCHD1-205ENST00000581383 GPR83Q9NYM4 423 aa3.68□□□□□ -1.82
SMCHD1-205ENST00000581383 ARMCX1Q9P291 453 aa3.68□□□□□ -1.82
SMCHD1-205ENST00000581383 P2RX2Q9UBL9 471 aa3.68□□□□□ -1.82
SMCHD1-205ENST00000581383 PURGQ9UJV8 347 aaKnown RBP3.68□□□□□ -1.82
SMCHD1-205ENST00000581383 MTF2Q9Y483 593 aaPredicted RBP3.68□□□□□ -1.82
SMCHD1-205ENST00000581383 LRIT2A6NDA9 550 aa3.67□□□□□ -1.82
SMCHD1-205ENST00000581383 H0YL77 283 aa3.67□□□□□ -1.82
SMCHD1-205ENST00000581383 IMPA2O14732 288 aa3.67□□□□□ -1.82
SMCHD1-205ENST00000581383 TYROBPO43914 113 aa3.67□□□□□ -1.82
SMCHD1-205ENST00000581383 TRIM16O95361 564 aa3.67□□□□□ -1.82
SMCHD1-205ENST00000581383 HPP00738 406 aa3.67□□□□□ -1.82
SMCHD1-205ENST00000581383 SLC35G4P0C7Q5 338 aa3.67□□□□□ -1.82
SMCHD1-205ENST00000581383 RRASP10301 218 aa3.67□□□□□ -1.82
SMCHD1-205ENST00000581383 GATA2P23769 480 aaPredicted RBP3.67□□□□□ -1.82
SMCHD1-205ENST00000581383 PTPN6P29350 595 aa3.67□□□□□ -1.82
SMCHD1-205ENST00000581383 CCND2P30279 289 aa3.67□□□□□ -1.82
SMCHD1-205ENST00000581383 MTTPP55157 894 aa3.67□□□□□ -1.82
SMCHD1-205ENST00000581383 TRA2BP62995 288 aaKnown RBP3.67□□□□□ -1.82
SMCHD1-205ENST00000581383 ZNF85Q03923 595 aa3.67□□□□□ -1.82
SMCHD1-205ENST00000581383 ZNF239Q16600 458 aaKnown RBP3.67□□□□□ -1.82
SMCHD1-205ENST00000581383 PRR5LQ6MZQ0 368 aa3.67□□□□□ -1.82
SMCHD1-205ENST00000581383 STOX1Q6ZVD7 989 aa3.67□□□□□ -1.82
SMCHD1-205ENST00000581383 PAQR9Q6ZVX9 377 aa3.67□□□□□ -1.82
SMCHD1-205ENST00000581383 GET4Q7L5D6 327 aaPredicted RBP3.67□□□□□ -1.82
SMCHD1-205ENST00000581383 TSEN54Q7Z6J9 526 aaKnown RBP3.67□□□□□ -1.82
SMCHD1-205ENST00000581383 ARL14Q8N4G2 192 aa3.67□□□□□ -1.82
SMCHD1-205ENST00000581383 BCORP1Q8N888 145 aa3.67□□□□□ -1.82
SMCHD1-205ENST00000581383 SELENOMQ8WWX9 145 aa3.67□□□□□ -1.82
SMCHD1-205ENST00000581383 MCHR2Q969V1 340 aa3.67□□□□□ -1.82
SMCHD1-205ENST00000581383 RWDD1Q9H446 243 aaPredicted RBP3.67□□□□□ -1.82
SMCHD1-205ENST00000581383 TAS2R3Q9NYW6 316 aa3.67□□□□□ -1.82
SMCHD1-205ENST00000581383 DHRS4-AS1Q9P1J3 65 aa3.67□□□□□ -1.82
SMCHD1-205ENST00000581383 CSAG2Q9Y5P2 127 aa3.67□□□□□ -1.82
SMCHD1-205ENST00000581383 ATP8B3O60423 1300 aa3.67□□□□□ -1.82
SMCHD1-205ENST00000581383 TRAV9-2A0A087WT02 112 aa3.66□□□□□ -1.82
SMCHD1-205ENST00000581383 RGSL1A5PLK6 1076 aa3.66□□□□□ -1.82
SMCHD1-205ENST00000581383 MFSD2BA6NFX1 497 aa3.66□□□□□ -1.82
SMCHD1-205ENST00000581383 ZNF487B1APH4 448 aa3.66□□□□□ -1.82
SMCHD1-205ENST00000581383 E9PAM4 449 aa3.66□□□□□ -1.82
SMCHD1-205ENST00000581383 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.66□□□□□ -1.82
SMCHD1-205ENST00000581383 PDLIM1O00151 329 aa3.66□□□□□ -1.82
SMCHD1-205ENST00000581383 E2F3O00716 465 aa3.66□□□□□ -1.82
SMCHD1-205ENST00000581383 NDUFA7O95182 113 aa3.66□□□□□ -1.82
SMCHD1-205ENST00000581383 APBB3O95704 486 aa3.66□□□□□ -1.82
SMCHD1-205ENST00000581383 WNT2P09544 360 aa3.66□□□□□ -1.82
SMCHD1-205ENST00000581383 HOXB7P09629 217 aa3.66□□□□□ -1.82
SMCHD1-205ENST00000581383 ELK3P41970 407 aa3.66□□□□□ -1.82
SMCHD1-205ENST00000581383 HMGCS2P54868 508 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms