RNA–Protein interactions for RNA: ENST00000580642.2

SS18-215, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-215ENST00000580642 BHLHE22Q8NFJ8 381 aaPredicted RBP14.22□□□□□ -0.13
SS18-215ENST00000580642 OR8K3Q8NH51 312 aa14.22□□□□□ -0.13
SS18-215ENST00000580642 BBS10Q8TAM1 723 aa14.22□□□□□ -0.13
SS18-215ENST00000580642 SLC2A12Q8TD20 617 aa14.22□□□□□ -0.13
SS18-215ENST00000580642 SLC38A5Q8WUX1 472 aa14.22□□□□□ -0.13
SS18-215ENST00000580642 RASSF5Q8WWW0 418 aa14.22□□□□□ -0.13
SS18-215ENST00000580642 VSTM2LQ96N03 204 aa14.22□□□□□ -0.13
SS18-215ENST00000580642 CNPPD1Q9BV87 410 aa14.22□□□□□ -0.13
SS18-215ENST00000580642 SPATA5L1Q9BVQ7 753 aa14.22□□□□□ -0.13
SS18-215ENST00000580642 BTBD2Q9BX70 525 aa14.22□□□□□ -0.13
SS18-215ENST00000580642 SEMA4CQ9C0C4 833 aa14.22□□□□□ -0.13
SS18-215ENST00000580642 SERHL2Q9H4I8 314 aa14.22□□□□□ -0.13
SS18-215ENST00000580642 AKIRIN1Q9H9L7 192 aaPredicted RBP14.22□□□□□ -0.13
SS18-215ENST00000580642 THSD1Q9NS62 852 aa14.22□□□□□ -0.13
SS18-215ENST00000580642 EGFL7Q9UHF1 273 aa14.22□□□□□ -0.13
SS18-215ENST00000580642 RPS6KA6Q9UK32 745 aa14.22□□□□□ -0.13
SS18-215ENST00000580642 TCFL5Q9UL49 500 aa14.22□□□□□ -0.13
SS18-215ENST00000580642 SAMD4AQ9UPU9 718 aaKnown RBP14.22□□□□□ -0.13
SS18-215ENST00000580642 ERVK-19Q9WJR5 959 aa14.22□□□□□ -0.13
SS18-215ENST00000580642 PTRH2Q9Y3E5 179 aaKnown RBP14.22□□□□□ -0.13
SS18-215ENST00000580642 A0A0G2JPF8 293 aa14.21□□□□□ -0.13
SS18-215ENST00000580642 OR2W5A6NFC9 320 aa14.21□□□□□ -0.13
SS18-215ENST00000580642 HNRNPCL2B2RXH8 293 aa14.21□□□□□ -0.13
SS18-215ENST00000580642 HNRNPCL3B7ZW38 293 aa14.21□□□□□ -0.13
SS18-215ENST00000580642 SORBS2O94875 1100 aaKnown RBP14.21□□□□□ -0.13
SS18-215ENST00000580642 HNRNPCL4P0DMR1 293 aa14.21□□□□□ -0.13
SS18-215ENST00000580642 OR12D1P0DN82 309 aa14.21□□□□□ -0.13
SS18-215ENST00000580642 ETS2P15036 469 aa14.21□□□□□ -0.13
SS18-215ENST00000580642 TCN2P20062 427 aa14.21□□□□□ -0.13
SS18-215ENST00000580642 DRD5P21918 477 aa14.21□□□□□ -0.13
SS18-215ENST00000580642 LCN1P31025 176 aa14.21□□□□□ -0.13
SS18-215ENST00000580642 MSX2P35548 267 aaPredicted RBP14.21□□□□□ -0.13
SS18-215ENST00000580642 PPICP45877 212 aa14.21□□□□□ -0.13
SS18-215ENST00000580642 GPR143P51810 404 aa14.21□□□□□ -0.13
SS18-215ENST00000580642 PGDP52209 483 aa14.21□□□□□ -0.13
SS18-215ENST00000580642 SLC37A1P57057 533 aa14.21□□□□□ -0.13
SS18-215ENST00000580642 PCBP3P57721 371 aaKnown RBP14.21□□□□□ -0.13
SS18-215ENST00000580642 CCNIQ14094 377 aa14.21□□□□□ -0.13
SS18-215ENST00000580642 ARHGAP11BQ3KRB8 267 aa14.21□□□□□ -0.13
SS18-215ENST00000580642 SFT2D3Q587I9 215 aa14.21□□□□□ -0.13
SS18-215ENST00000580642 FAM199XQ6PEV8 388 aaPredicted RBP14.21□□□□□ -0.13
SS18-215ENST00000580642 LRRC74BQ6ZQY2 392 aa14.21□□□□□ -0.13
SS18-215ENST00000580642 KRT73Q86Y46 540 aa14.21□□□□□ -0.13
SS18-215ENST00000580642 PRSS58Q8IYP2 241 aa14.21□□□□□ -0.13
SS18-215ENST00000580642 ENDOVQ8N8Q3 282 aaKnown RBP14.21□□□□□ -0.13
SS18-215ENST00000580642 B3GNT7Q8NFL0 401 aa14.21□□□□□ -0.13
SS18-215ENST00000580642 ZNF721Q8TF20 911 aa14.21□□□□□ -0.13
SS18-215ENST00000580642 CT55Q8WUE5 264 aa14.21□□□□□ -0.13
SS18-215ENST00000580642 XAGE5Q8WWM1 108 aa14.21□□□□□ -0.13
SS18-215ENST00000580642 FIG4Q92562 907 aa14.21□□□□□ -0.13
SS18-215ENST00000580642 C16orf58Q96GQ5 468 aa14.21□□□□□ -0.13
SS18-215ENST00000580642 IP6K3Q96PC2 410 aa14.21□□□□□ -0.13
SS18-215ENST00000580642 BTBD9Q96Q07 612 aa14.21□□□□□ -0.13
SS18-215ENST00000580642 EFHD1Q9BUP0 239 aa14.21□□□□□ -0.13
SS18-215ENST00000580642 UGT2B28Q9BY64 529 aa14.21□□□□□ -0.13
SS18-215ENST00000580642 PIF1Q9H611 641 aa14.21□□□□□ -0.13
SS18-215ENST00000580642 DCAF13Q9NV06 445 aaKnown RBP14.21□□□□□ -0.13
SS18-215ENST00000580642 PTPRZ1P23471 2315 aaPredicted RBP14.21□□□□□ -0.13
SS18-215ENST00000580642 PMS2P1A4D2B8 440 aa14.2□□□□□ -0.14
SS18-215ENST00000580642 TERTO14746 1132 aaKnown RBP14.2□□□□□ -0.14
SS18-215ENST00000580642 SERPINB7O75635 380 aa14.2□□□□□ -0.14
SS18-215ENST00000580642 PGM3O95394 542 aa14.2□□□□□ -0.14
SS18-215ENST00000580642 C1QCP02747 245 aa14.2□□□□□ -0.14
SS18-215ENST00000580642 UMODP07911 640 aa14.2□□□□□ -0.14
SS18-215ENST00000580642 NUDT7P0C024 238 aa14.2□□□□□ -0.14
SS18-215ENST00000580642 NR2F1P10589 423 aa14.2□□□□□ -0.14
SS18-215ENST00000580642 TRHRP34981 398 aaPredicted RBP14.2□□□□□ -0.14
SS18-215ENST00000580642 RPS26P62854 115 aaKnown RBP14.2□□□□□ -0.14
SS18-215ENST00000580642 AP2B1P63010 937 aa14.2□□□□□ -0.14
SS18-215ENST00000580642 DNASE1L3Q13609 305 aa14.2□□□□□ -0.14
SS18-215ENST00000580642 COL9A2Q14055 689 aaPredicted RBP14.2□□□□□ -0.14
SS18-215ENST00000580642 EXT1Q16394 746 aa14.2□□□□□ -0.14
SS18-215ENST00000580642 CYP27C1Q4G0S4 372 aa14.2□□□□□ -0.14
SS18-215ENST00000580642 C16orf62Q7Z3J2 963 aa14.2□□□□□ -0.14
SS18-215ENST00000580642 SPATA24Q86W54 205 aa14.2□□□□□ -0.14
SS18-215ENST00000580642 DTX1Q86Y01 620 aa14.2□□□□□ -0.14
SS18-215ENST00000580642 SLC16A11Q8NCK7 471 aa14.2□□□□□ -0.14
SS18-215ENST00000580642 NFAM1Q8NET5 270 aaPredicted RBP14.2□□□□□ -0.14
SS18-215ENST00000580642 C16orf52Q8NHV5 167 aa14.2□□□□□ -0.14
SS18-215ENST00000580642 FAM162AQ96A26 154 aa14.2□□□□□ -0.14
SS18-215ENST00000580642 TP53INP1Q96A56 240 aa14.2□□□□□ -0.14
SS18-215ENST00000580642 SLC35A4Q96G79 324 aa14.2□□□□□ -0.14
SS18-215ENST00000580642 VMP1Q96GC9 406 aa14.2□□□□□ -0.14
SS18-215ENST00000580642 ZNF607Q96SK3 696 aa14.2□□□□□ -0.14
SS18-215ENST00000580642 ZNF700Q9H0M5 742 aa14.2□□□□□ -0.14
SS18-215ENST00000580642 MAGIXQ9H6Y5 334 aa14.2□□□□□ -0.14
SS18-215ENST00000580642 DCLRE1BQ9H816 532 aa14.2□□□□□ -0.14
SS18-215ENST00000580642 TRIM45Q9H8W5 580 aaPredicted RBP14.2□□□□□ -0.14
SS18-215ENST00000580642 FOLH1BQ9HBA9 442 aa14.2□□□□□ -0.14
SS18-215ENST00000580642 Q9N2J8 555 aa14.2□□□□□ -0.14
SS18-215ENST00000580642 ASCL3Q9NQ33 180 aa14.2□□□□□ -0.14
SS18-215ENST00000580642 EQTNQ9NQ60 294 aa14.2□□□□□ -0.14
SS18-215ENST00000580642 ADPRHL2Q9NX46 363 aa14.2□□□□□ -0.14
SS18-215ENST00000580642 MRTO4Q9UKD2 239 aaKnown RBP14.2□□□□□ -0.14
SS18-215ENST00000580642 FER1L5A0AVI2 2057 aa14.19□□□□□ -0.14
SS18-215ENST00000580642 MYOCOSA0A1B0GUC4 107 aa14.19□□□□□ -0.14
SS18-215ENST00000580642 FAM149AA5PLN7 773 aa14.19□□□□□ -0.14
SS18-215ENST00000580642 ACOX3O15254 700 aa14.19□□□□□ -0.14
SS18-215ENST00000580642 ENTPD5O75356 428 aa14.19□□□□□ -0.14
SS18-215ENST00000580642 CLPSP04118 112 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms