RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 PBKQ96KB5 322 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 F2RL3Q96RI0 385 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 NAP1L3Q99457 506 aaPredicted RBP5.29□□□□□ -1.56
SMG6-219ENST00000575663 ARPC5LQ9BPX5 153 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 CENPKQ9BS16 269 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 EFCAB11Q9BUY7 163 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 CACNG6Q9BXT2 260 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 PRRG4Q9BZD6 226 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 EHD1Q9H4M9 534 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 MANSC1Q9H8J5 431 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 WDR41Q9HAD4 459 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 EML4Q9HC35 981 aaKnown RBP5.29□□□□□ -1.56
SMG6-219ENST00000575663 GALNT9Q9HCQ5 603 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 PRDM7Q9NQW5 492 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 CHCHD3Q9NX63 227 aaKnown RBP5.29□□□□□ -1.56
SMG6-219ENST00000575663 MOCS1Q9NZB8 636 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 GPRC5BQ9NZH0 403 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 PHF11Q9UIL8 331 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 SNX12Q9UMY4 172 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 PACSIN2Q9UNF0 486 aaPredicted RBP5.29□□□□□ -1.56
SMG6-219ENST00000575663 CFL2Q9Y281 166 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 DTX4Q9Y2E6 619 aa5.29□□□□□ -1.56
SMG6-219ENST00000575663 ZCWPW2A0A1B0GU75 182 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 H0YHG0 523 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 LINC01387J3KSC0 135 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 RTCAO00442 366 aaKnown RBP5.28□□□□□ -1.56
SMG6-219ENST00000575663 ACOX3O15254 700 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 SLU7O95391 586 aaKnown RBP5.28□□□□□ -1.56
SMG6-219ENST00000575663 GPR75O95800 540 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 TBX6O95947 436 aaPredicted RBP5.28□□□□□ -1.56
SMG6-219ENST00000575663 CLPSP04118 112 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 ABCB1P08183 1280 aaPredicted RBP5.28□□□□□ -1.56
SMG6-219ENST00000575663 NR2F6P10588 404 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 PSMB1P20618 241 aaKnown RBP5.28□□□□□ -1.56
SMG6-219ENST00000575663 TCEA1P23193 301 aaKnown RBP5.28□□□□□ -1.56
SMG6-219ENST00000575663 IL32P24001 234 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 SERPINB1P30740 379 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 SRP14P37108 136 aaKnown RBP5.28□□□□□ -1.56
SMG6-219ENST00000575663 PAFAH1B1P43034 410 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 COMPP49747 757 aaPredicted RBP5.28□□□□□ -1.56
SMG6-219ENST00000575663 RAP1GDS1P52306 607 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 CDKN2DP55273 166 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 CDH11P55287 796 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 CDKL1Q00532 357 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 DEFA6Q01524 100 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 SCGB2A2Q13296 93 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 LAPTM5Q13571 262 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 SNX1Q13596 522 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 RAB35Q15286 201 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 GUSBP1Q15486 140 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 NNATQ16517 81 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 SGCBQ16585 318 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 HIST2H2ACQ16777 129 aaPredicted RBP5.28□□□□□ -1.56
SMG6-219ENST00000575663 PPP1R3AQ16821 1122 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 GLE1Q53GS7 698 aaKnown RBP5.28□□□□□ -1.56
SMG6-219ENST00000575663 RAET1LQ5VY80 246 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 HIST2H2AA3Q6FI13 130 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 SEZ6L2Q6UXD5 910 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 NUP54Q7Z3B4 507 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 VN1R5Q7Z5H4 357 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 ADAMTSL2Q86TH1 951 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 SLC35F6Q8N357 371 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 C17orf53Q8N3J3 647 aaPredicted RBP5.28□□□□□ -1.56
SMG6-219ENST00000575663 ZNF525Q8N782 197 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 BANPQ8N9N5 519 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 KBTBD8Q8NFY9 601 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 LILRB1Q8NHL6 650 aaPredicted RBP5.28□□□□□ -1.56
SMG6-219ENST00000575663 DOK4Q8TEW6 326 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 MAIP1Q8WWC4 291 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 C1orf54Q8WWF1 131 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 UBE2E3Q969T4 207 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 TMCO6Q96DC7 493 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 OMA1Q96E52 524 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 PTCD3Q96EY7 689 aaKnown RBP5.28□□□□□ -1.56
SMG6-219ENST00000575663 HES6Q96HZ4 224 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 GMPPAQ96IJ6 420 aaPredicted RBP5.28□□□□□ -1.56
SMG6-219ENST00000575663 SERPINB12Q96P63 405 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 NODALQ96S42 347 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 POTEKPQ9BYX7 375 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 TRIM2Q9C040 744 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 OR10A5Q9H207 317 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 MED4Q9NPJ6 270 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 PLSCR4Q9NRQ2 329 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 IARS2Q9NSE4 1012 aaKnown RBP5.28□□□□□ -1.56
SMG6-219ENST00000575663 CISD1Q9NZ45 108 aaKnown RBP5.28□□□□□ -1.56
SMG6-219ENST00000575663 WHRNQ9P202 907 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 B3GALT5Q9Y2C3 310 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 ZNF281Q9Y2X9 895 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 MRPS18CQ9Y3D5 142 aaKnown RBP5.28□□□□□ -1.56
SMG6-219ENST00000575663 ABCA1O95477 2261 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 USF3Q68DE3 2245 aa5.28□□□□□ -1.56
SMG6-219ENST00000575663 DOCK7Q96N67 2140 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 A0A0A6YYJ9 748 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 SLC35F4A4IF30 521 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 C2orf72A6NCS6 295 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 NPEPPSL1A6NEC2 478 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 ERICH4A6NGS2 130 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 SDR42E2A6NKP2 422 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 SLCO1B7G3V0H7 640 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 SS18L1O75177 396 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms