RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 TECPR1Q7Z6L1 1165 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 KRT73Q86Y46 540 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 SPPL3Q8TCT6 385 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 DEDD2Q8WXF8 326 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 RAD9AQ99638 391 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 TAPBPLQ9BX59 468 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 BEX1Q9HBH7 125 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 HSPB11Q9Y547 144 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 UNC13CQ8NB66 2214 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 SHISA3A0PJX4 238 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 TLR4O00206 839 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 GKN3PP0CG01 181 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 SAGP10523 405 aaPredicted RBP8.05□□□□□ -1.12
RPAIN-215ENST00000575112 PEPDP12955 493 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 MYL12AP19105 171 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 KELP23276 732 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 PTX3P26022 381 aaPredicted RBP8.05□□□□□ -1.12
RPAIN-215ENST00000575112 MVDP53602 400 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 POU6F2P78424 691 aaPredicted RBP8.05□□□□□ -1.12
RPAIN-215ENST00000575112 PDGFRLQ15198 375 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 PYDC2Q56P42 97 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 SFTPA2Q8IWL1 248 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 CBARPQ8N350 705 aaPredicted RBP8.05□□□□□ -1.12
RPAIN-215ENST00000575112 OR51A7Q8NH64 312 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 UPRTQ96BW1 309 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 DTD2Q96FN9 168 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 ACER3Q9NUN7 267 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 MCUBQ9NWR8 336 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 TBX21Q9UL17 535 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 ALG5Q9Y673 324 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 CENPBD1B2RD01 187 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 PSMD9O00233 223 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 GREM1O60565 184 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 LDB3O75112 727 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 PSIP1O75475 530 aaKnown RBP8.05□□□□□ -1.12
RPAIN-215ENST00000575112 IFNA16P05015 189 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 SOX18P35713 384 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 P2RY2P41231 377 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 SLC9A3P48764 834 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 SMSP52788 366 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 LIM2P55344 173 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 SELENOWP63302 87 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 ERV3-1Q14264 604 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 WSCD2Q2TBF2 565 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 OTPQ5XKR4 325 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 ZNF57Q68EA5 555 aaPredicted RBP8.05□□□□□ -1.12
RPAIN-215ENST00000575112 GRHL2Q6ISB3 625 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 PLEKHM3Q6ZWE6 761 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 AMIGO1Q86WK6 493 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 ZNF689Q96CS4 500 aaPredicted RBP8.05□□□□□ -1.12
RPAIN-215ENST00000575112 ZG16BQ96DA0 208 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 ZBED6CLQ96FA7 236 aaPredicted RBP8.05□□□□□ -1.12
RPAIN-215ENST00000575112 COQ7Q99807 217 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 CHST8Q9H2A9 424 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 PHPT1Q9NRX4 125 aaPredicted RBP8.05□□□□□ -1.12
RPAIN-215ENST00000575112 GULP1Q9UBP9 304 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 SVILO95425 2214 aa8.05□□□□□ -1.12
RPAIN-215ENST00000575112 HMX3A6NHT5 357 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 H1F0P07305 194 aaKnown RBP8.04□□□□□ -1.12
RPAIN-215ENST00000575112 ASGR2P07307 311 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 RAE1P78406 368 aaKnown RBP8.04□□□□□ -1.12
RPAIN-215ENST00000575112 FAPQ12884 760 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 ELAVL3Q14576 367 aaKnown RBP8.04□□□□□ -1.12
RPAIN-215ENST00000575112 SLC9A5Q14940 896 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 REEP3Q6NUK4 255 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 SLC30A6Q6NXT4 461 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 PDZD3Q86UT5 571 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 CYB561A3Q8NBI2 242 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 OR4C15Q8NGM1 316 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 SLC38A5Q8WUX1 472 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 ZNF607Q96SK3 696 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 ARPC5LQ9BPX5 153 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 HDHD2Q9H0R4 259 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 EGLN3Q9H6Z9 239 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 SLC28A3Q9HAS3 691 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 WSB2Q9NYS7 404 aaPredicted RBP8.04□□□□□ -1.12
RPAIN-215ENST00000575112 NLGN3Q9NZ94 848 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 PLEKHB1Q9UF11 243 aaPredicted RBP8.04□□□□□ -1.12
RPAIN-215ENST00000575112 CCDC182A6NF36 153 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 FABP12A6NFH5 140 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 CASKO14936 926 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 HRO43593 1189 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 HMGN2P05204 90 aaKnown RBP8.04□□□□□ -1.12
RPAIN-215ENST00000575112 ITGA2P17301 1181 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 MMP12P39900 470 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 MC3RP41968 323 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 AGFG1P52594 562 aaKnown RBP8.04□□□□□ -1.12
RPAIN-215ENST00000575112 SRP54P61011 504 aaKnown RBP8.04□□□□□ -1.12
RPAIN-215ENST00000575112 CSNK2BP67870 215 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 TFF2Q03403 129 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 C1DQ13901 141 aaKnown RBP8.04□□□□□ -1.12
RPAIN-215ENST00000575112 MICAQ29983 383 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 MPEG1Q2M385 716 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 GLYR1Q49A26 553 aaPredicted RBP8.04□□□□□ -1.12
RPAIN-215ENST00000575112 HENMT1Q5T8I9 393 aaKnown RBP8.04□□□□□ -1.12
RPAIN-215ENST00000575112 COMTD1Q86VU5 262 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 OR9A2Q8NGT5 310 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 GRPEL2Q8TAA5 225 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 TM9SF4Q92544 642 aa8.04□□□□□ -1.12
RPAIN-215ENST00000575112 INSM2Q96T92 566 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms