RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 FOXRED2Q8IWF2 684 aa4.18□□□□□ -1.74
CHD9-220ENST00000569794 CDK20Q8IZL9 346 aa4.18□□□□□ -1.74
CHD9-220ENST00000569794 PPFIBP2Q8ND30 876 aa4.18□□□□□ -1.74
CHD9-220ENST00000569794 NPEPL1Q8NDH3 523 aa4.18□□□□□ -1.74
CHD9-220ENST00000569794 OR4L1Q8NH43 312 aa4.18□□□□□ -1.74
CHD9-220ENST00000569794 RNF128Q8TEB7 428 aa4.18□□□□□ -1.74
CHD9-220ENST00000569794 SPRYD4Q8WW59 207 aaPredicted RBP4.18□□□□□ -1.74
CHD9-220ENST00000569794 LIPHQ8WWY8 451 aa4.18□□□□□ -1.74
CHD9-220ENST00000569794 MSANTD3Q96H12 275 aa4.18□□□□□ -1.74
CHD9-220ENST00000569794 ARL5BQ96KC2 179 aa4.18□□□□□ -1.74
CHD9-220ENST00000569794 VSTM2LQ96N03 204 aa4.18□□□□□ -1.74
CHD9-220ENST00000569794 TDRD1Q9BXT4 1180 aaKnown RBP4.18□□□□□ -1.74
CHD9-220ENST00000569794 DNTTIP1Q9H147 329 aa4.18□□□□□ -1.74
CHD9-220ENST00000569794 MTIF3Q9H2K0 278 aaKnown RBP4.18□□□□□ -1.74
CHD9-220ENST00000569794 RGCCQ9H4X1 137 aa4.18□□□□□ -1.74
CHD9-220ENST00000569794 FKRPQ9H9S5 495 aa4.18□□□□□ -1.74
CHD9-220ENST00000569794 PARVGQ9HBI0 331 aa4.18□□□□□ -1.74
CHD9-220ENST00000569794 ZNF160Q9HCG1 818 aa4.18□□□□□ -1.74
CHD9-220ENST00000569794 CHMP5Q9NZZ3 219 aa4.18□□□□□ -1.74
CHD9-220ENST00000569794 SLC12A6Q9UHW9 1150 aa4.18□□□□□ -1.74
CHD9-220ENST00000569794 A0A1B0GVL5 298 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 TTC26A0AVF1 554 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 RRP8O43159 456 aaKnown RBP4.17□□□□□ -1.74
CHD9-220ENST00000569794 SCGNO76038 276 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 S100A6P06703 90 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 TPM3P06753 285 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 CRYGCP07315 174 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 APRTP07741 180 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 STAG3L2P0CL84 134 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 ANPEPP15144 967 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 CYP11B1P15538 503 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 PSMA2P25787 234 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 MAGEA8P43361 318 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 HOXA1P49639 335 aaPredicted RBP4.17□□□□□ -1.74
CHD9-220ENST00000569794 CSRP3P50461 194 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 TPMTP51580 245 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 PDX1P52945 283 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 C21orf59P57076 290 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 RGS8P57771 180 aaPredicted RBP4.17□□□□□ -1.74
CHD9-220ENST00000569794 ASPHQ12797 758 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 ELAVL3Q14576 367 aaKnown RBP4.17□□□□□ -1.74
CHD9-220ENST00000569794 EXOSC7Q15024 291 aaKnown RBP4.17□□□□□ -1.74
CHD9-220ENST00000569794 SPHARQ15513 63 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 PHKG1Q16816 387 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 ALKBH6Q3KRA9 238 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 NKAIN1Q4KMZ8 207 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 PHLDA2Q53GA4 152 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 XKR7Q5GH72 579 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 SPDYCQ5MJ68 293 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 CTSL3PQ5NE16 218 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 C20orf194Q5TEA3 1177 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 PLCXD3Q63HM9 321 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 RTL6Q6ICC9 239 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 SPINK14Q6IE38 97 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 OR4A47Q6IF82 309 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 CAPN13Q6MZZ7 669 aaPredicted RBP4.17□□□□□ -1.74
CHD9-220ENST00000569794 DEGS2Q6QHC5 323 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 SLC22A16Q86VW1 577 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 EFCAB13Q8IY85 973 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 MYOCDQ8IZQ8 938 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 TMEM123Q8N131 208 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 LINC00469Q8N7U9 141 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 COLGALT1Q8NBJ5 622 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 RNF149Q8NC42 400 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 DDHD1Q8NEL9 900 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 OR6M1Q8NGM8 313 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 DDI1Q8WTU0 396 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 MITD1Q8WV92 249 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 ASZ1Q8WWH4 475 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 RPL3LQ92901 407 aaKnown RBP4.17□□□□□ -1.74
CHD9-220ENST00000569794 SENP5Q96HI0 755 aaPredicted RBP4.17□□□□□ -1.74
CHD9-220ENST00000569794 PRRC1Q96M27 445 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 FAM20AQ96MK3 541 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 NDNQ99608 321 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 RTP3Q9BQQ7 232 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 RBM24Q9BX46 236 aaKnown RBP4.17□□□□□ -1.74
CHD9-220ENST00000569794 PINK1Q9BXM7 581 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 UBXN6Q9BZV1 441 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 TRIM9Q9C026 710 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 ZMYND12Q9H0C1 365 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 SDCBP2Q9H190 292 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 TDRD3Q9H7E2 651 aaKnown RBP4.17□□□□□ -1.74
CHD9-220ENST00000569794 KAT8Q9H7Z6 458 aaKnown RBP4.17□□□□□ -1.74
CHD9-220ENST00000569794 SPACA1Q9HBV2 294 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 TREM1Q9NP99 234 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 ACKR4Q9NPB9 350 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.17□□□□□ -1.74
CHD9-220ENST00000569794 PEF1Q9UBV8 284 aaKnown RBP4.17□□□□□ -1.74
CHD9-220ENST00000569794 EPHA6Q9UF33 1036 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 PISDQ9UG56 409 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 DAPK2Q9UIK4 370 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 AMDHD2Q9Y303 409 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 YIPF1Q9Y548 306 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 ETV7Q9Y603 341 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 BZW2Q9Y6E2 419 aaKnown RBP4.17□□□□□ -1.74
CHD9-220ENST00000569794 COLEC10Q9Y6Z7 277 aa4.17□□□□□ -1.74
CHD9-220ENST00000569794 BICRAQ9NZM4 1560 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 KIF27Q86VH2 1401 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 PRAG1Q86YV5 1406 aa4.16□□□□□ -1.74
CHD9-220ENST00000569794 LOC105371242A0A075B767 164 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms