RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 LRATO95237 230 aa11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 TSPAN8P19075 237 aa11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 CTSSP25774 331 aa11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 GCAP28676 217 aa11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 HMOX2P30519 316 aa11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 ALDH9A1P49189 494 aa11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 ACSM2AQ08AH3 577 aa11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 EFR3AQ14156 821 aa11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 RCAN2Q14206 197 aa11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 DAZAP2Q15038 168 aaPredicted RBP11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 CEBPEQ15744 281 aa11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 ERCC6LQ2NKX8 1250 aa11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 TRMT12Q53H54 448 aaKnown RBP11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 ACSM2BQ68CK6 577 aa11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 BICRALQ6AI39 1079 aa11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 ENPP6Q6UWR7 440 aa11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 ANGPTL8Q6UXH0 198 aa11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 RPS27LQ71UM5 84 aaKnown RBP11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 CCDC116Q8IYX3 515 aa11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 PRR22Q8IZ63 422 aa11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 ADCY4Q8NFM4 1077 aa11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 TNIP2Q8NFZ5 429 aa11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 KIF18AQ8NI77 898 aa11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 UHMK1Q8TAS1 419 aaKnown RBP11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 SLC35A4Q96G79 324 aa11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 WDYHV1Q96HA8 205 aa11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 METTL2AQ96IZ6 378 aaKnown RBP11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 ZFP3Q96NJ6 502 aa11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 COL21A1Q96P44 957 aa11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 BTBD9Q96Q07 612 aa11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 UCN2Q96RP3 112 aa11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 OSBPL11Q9BXB4 747 aa11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 ITPAQ9BY32 194 aa11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 UGT2B28Q9BY64 529 aa11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 DNAJB12Q9NXW2 375 aaKnown RBP11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 KLRF1Q9NZS2 232 aa11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 CAMK2AQ9UQM7 478 aa11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 DLGAP4Q9Y2H0 992 aa11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 AKAP9Q99996 3911 aa11.12□□□□□ -0.63
GTF3C1-204ENST00000564664 NCKAP5O14513 1909 aa11.11□□□□□ -0.63
GTF3C1-204ENST00000564664 MED13LQ71F56 2210 aa11.11□□□□□ -0.63
GTF3C1-204ENST00000564664 CELSR1Q9NYQ6 3014 aa11.11□□□□□ -0.63
GTF3C1-204ENST00000564664 GNG14A0A1W2PPG7 69 aa11.11□□□□□ -0.63
GTF3C1-204ENST00000564664 MBD3L4A6NDZ8 208 aaPredicted RBP11.11□□□□□ -0.63
GTF3C1-204ENST00000564664 MBD3L3A6NE82 208 aaPredicted RBP11.11□□□□□ -0.63
GTF3C1-204ENST00000564664 MBD3L5A6NJ08 208 aaPredicted RBP11.11□□□□□ -0.63
GTF3C1-204ENST00000564664 GNB5O14775 395 aa11.11□□□□□ -0.63
GTF3C1-204ENST00000564664 PCDH7O60245 1069 aa11.11□□□□□ -0.63
GTF3C1-204ENST00000564664 PLOD3O60568 738 aa11.11□□□□□ -0.63
GTF3C1-204ENST00000564664 UGT2B11O75310 529 aa11.11□□□□□ -0.63
GTF3C1-204ENST00000564664 GOSR1O95249 250 aa11.11□□□□□ -0.63
GTF3C1-204ENST00000564664 CYP4B1P13584 511 aa11.11□□□□□ -0.63
GTF3C1-204ENST00000564664 PCSK2P16519 638 aa11.11□□□□□ -0.63
GTF3C1-204ENST00000564664 BMP5P22003 454 aa11.11□□□□□ -0.63
GTF3C1-204ENST00000564664 UQCRC1P31930 480 aa11.11□□□□□ -0.63
GTF3C1-204ENST00000564664 SOX18P35713 384 aa11.11□□□□□ -0.63
GTF3C1-204ENST00000564664 PNLIPRP2P54317 469 aa11.11□□□□□ -0.63
GTF3C1-204ENST00000564664 NAGLUP54802 743 aa11.11□□□□□ -0.63
GTF3C1-204ENST00000564664 EXOSC7Q15024 291 aaKnown RBP11.11□□□□□ -0.63
GTF3C1-204ENST00000564664 EIPR1Q53HC9 387 aa11.11□□□□□ -0.63
GTF3C1-204ENST00000564664 ZNF628Q5EBL2 1059 aa11.11□□□□□ -0.63
GTF3C1-204ENST00000564664 AAGABQ6PD74 315 aa11.11□□□□□ -0.63
GTF3C1-204ENST00000564664 POMZP3Q6PJE2 187 aa11.11□□□□□ -0.63
GTF3C1-204ENST00000564664 FAM83FQ8NEG4 500 aaPredicted RBP11.11□□□□□ -0.63
GTF3C1-204ENST00000564664 MBD3L2Q8NHZ7 208 aaPredicted RBP11.11□□□□□ -0.63
GTF3C1-204ENST00000564664 FAM76AQ8TAV0 307 aa11.11□□□□□ -0.63
GTF3C1-204ENST00000564664 C11orf24Q96F05 449 aaPredicted RBP11.11□□□□□ -0.63
GTF3C1-204ENST00000564664 TMEM237Q96Q45 408 aa11.11□□□□□ -0.63
GTF3C1-204ENST00000564664 NODALQ96S42 347 aa11.11□□□□□ -0.63
GTF3C1-204ENST00000564664 TM9SF2Q99805 663 aa11.11□□□□□ -0.63
GTF3C1-204ENST00000564664 SH3GL2Q99962 352 aa11.11□□□□□ -0.63
GTF3C1-204ENST00000564664 OR2B2Q9GZK3 357 aa11.11□□□□□ -0.63
GTF3C1-204ENST00000564664 PFDN4Q9NQP4 134 aa11.11□□□□□ -0.63
GTF3C1-204ENST00000564664 SLC35C2Q9NQQ7 365 aa11.11□□□□□ -0.63
GTF3C1-204ENST00000564664 TAS2R9Q9NYW1 312 aa11.11□□□□□ -0.63
GTF3C1-204ENST00000564664 TAS2R7Q9NYW3 318 aa11.11□□□□□ -0.63
GTF3C1-204ENST00000564664 HEY2Q9UBP5 337 aa11.11□□□□□ -0.63
GTF3C1-204ENST00000564664 GRID1Q9ULK0 1009 aa11.11□□□□□ -0.63
GTF3C1-204ENST00000564664 DTX4Q9Y2E6 619 aa11.11□□□□□ -0.63
GTF3C1-204ENST00000564664 SLC6A5Q9Y345 797 aa11.11□□□□□ -0.63
GTF3C1-204ENST00000564664 PRAMEF25A6NGN4 478 aa11.1□□□□□ -0.63
GTF3C1-204ENST00000564664 REM1O75628 298 aa11.1□□□□□ -0.63
GTF3C1-204ENST00000564664 IL3P08700 152 aa11.1□□□□□ -0.63
GTF3C1-204ENST00000564664 CT45A8P0DMV1 189 aa11.1□□□□□ -0.63
GTF3C1-204ENST00000564664 CT45A9P0DMV2 189 aa11.1□□□□□ -0.63
GTF3C1-204ENST00000564664 CHMP24386 653 aa11.1□□□□□ -0.63
GTF3C1-204ENST00000564664 DNAJA1P31689 397 aaKnown RBP11.1□□□□□ -0.63
GTF3C1-204ENST00000564664 KRT20P35900 424 aa11.1□□□□□ -0.63
GTF3C1-204ENST00000564664 PTGDSP41222 190 aa11.1□□□□□ -0.63
GTF3C1-204ENST00000564664 RAE1P78406 368 aaKnown RBP11.1□□□□□ -0.63
GTF3C1-204ENST00000564664 SORDQ00796 357 aa11.1□□□□□ -0.63
GTF3C1-204ENST00000564664 HMGCS1Q01581 520 aa11.1□□□□□ -0.63
GTF3C1-204ENST00000564664 GAB1Q13480 694 aa11.1□□□□□ -0.63
GTF3C1-204ENST00000564664 BCL2A1Q16548 175 aa11.1□□□□□ -0.63
GTF3C1-204ENST00000564664 FLYWCH1Q4VC44 716 aa11.1□□□□□ -0.63
GTF3C1-204ENST00000564664 CT45A2Q5DJT8 189 aa11.1□□□□□ -0.63
GTF3C1-204ENST00000564664 WIPI1Q5MNZ9 446 aaPredicted RBP11.1□□□□□ -0.63
GTF3C1-204ENST00000564664 PLCZ1Q86YW0 608 aa11.1□□□□□ -0.63
GTF3C1-204ENST00000564664 MMP21Q8N119 569 aa11.1□□□□□ -0.63
GTF3C1-204ENST00000564664 EIF1ADQ8N9N8 165 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms