RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 SF3B4Q15427 424 aaKnown RBP eCLIP15.42■□□□□ 0.062e-10■■□□□ 12.2
CLK3-210ENST00000563112 TIGD3Q6B0B8 471 aa15.42■□□□□ 0.06
CLK3-210ENST00000563112 TMEM81Q6P7N7 255 aa15.42■□□□□ 0.06
CLK3-210ENST00000563112 LURAP1LQ8IV03 231 aa15.42■□□□□ 0.06
CLK3-210ENST00000563112 OR1J4Q8NGS1 313 aa15.42■□□□□ 0.06
CLK3-210ENST00000563112 HGDQ93099 445 aa15.42■□□□□ 0.06
CLK3-210ENST00000563112 TMCO6Q96DC7 493 aa15.42■□□□□ 0.06
CLK3-210ENST00000563112 METTL2AQ96IZ6 378 aaKnown RBP15.42■□□□□ 0.06
CLK3-210ENST00000563112 GNRHR2Q96P88 292 aa15.42■□□□□ 0.06
CLK3-210ENST00000563112 OSBPL11Q9BXB4 747 aa15.42■□□□□ 0.06
CLK3-210ENST00000563112 STMN4Q9H169 189 aaPredicted RBP15.42■□□□□ 0.06
CLK3-210ENST00000563112 C12orf65Q9H3J6 166 aaKnown RBP15.42■□□□□ 0.06
CLK3-210ENST00000563112 MYNNQ9NPC7 610 aa15.42■□□□□ 0.06
CLK3-210ENST00000563112 TAS2R9Q9NYW1 312 aa15.42■□□□□ 0.06
CLK3-210ENST00000563112 KLRF1Q9NZS2 232 aa15.42■□□□□ 0.06
CLK3-210ENST00000563112 GPR55Q9Y2T6 319 aaPredicted RBP15.42■□□□□ 0.06
CLK3-210ENST00000563112 C15orf41Q9Y2V0 281 aa15.42■□□□□ 0.06
CLK3-210ENST00000563112 EXPH5Q8NEV8 1989 aa15.42■□□□□ 0.06
CLK3-210ENST00000563112 DCHS2Q6V1P9 2916 aa15.41■□□□□ 0.06
CLK3-210ENST00000563112 NCKAP5O14513 1909 aa15.41■□□□□ 0.06
CLK3-210ENST00000563112 NKX2-6A6NCS4 301 aa15.41■□□□□ 0.06
CLK3-210ENST00000563112 SLC28A1O00337 649 aa15.41■□□□□ 0.06
CLK3-210ENST00000563112 GNB5O14775 395 aa15.41■□□□□ 0.06
CLK3-210ENST00000563112 RGS14O43566 566 aa15.41■□□□□ 0.06
CLK3-210ENST00000563112 PLOD3O60568 738 aa15.41■□□□□ 0.06
CLK3-210ENST00000563112 TRIM13O60858 407 aa15.41■□□□□ 0.06
CLK3-210ENST00000563112 ABCB7O75027 752 aa15.41■□□□□ 0.06
CLK3-210ENST00000563112 SEC22BO75396 215 aa15.41■□□□□ 0.06
CLK3-210ENST00000563112 ERN1O75460 977 aaKnown RBP15.41■□□□□ 0.06
CLK3-210ENST00000563112 CHEK2O96017 543 aa15.41■□□□□ 0.06
CLK3-210ENST00000563112 GCKP35557 465 aa15.41■□□□□ 0.06
CLK3-210ENST00000563112 SOX18P35713 384 aa15.41■□□□□ 0.06
CLK3-210ENST00000563112 CDK9P50750 372 aaKnown RBP15.41■□□□□ 0.06
CLK3-210ENST00000563112 CEBPEQ15744 281 aa15.41■□□□□ 0.06
CLK3-210ENST00000563112 RTL6Q6ICC9 239 aa15.41■□□□□ 0.06
CLK3-210ENST00000563112 ANGPTL8Q6UXH0 198 aa15.41■□□□□ 0.06
CLK3-210ENST00000563112 C10orf107Q8IVU9 208 aa15.41■□□□□ 0.06
CLK3-210ENST00000563112 ULK2Q8IYT8 1036 aa15.41■□□□□ 0.06
CLK3-210ENST00000563112 TMBIM1Q969X1 311 aa15.41■□□□□ 0.06
CLK3-210ENST00000563112 DTNBP1Q96EV8 351 aa15.41■□□□□ 0.06
CLK3-210ENST00000563112 COL21A1Q96P44 957 aa15.41■□□□□ 0.06
CLK3-210ENST00000563112 NODALQ96S42 347 aa15.41■□□□□ 0.06
CLK3-210ENST00000563112 TRMOQ9BU70 441 aa15.41■□□□□ 0.06
CLK3-210ENST00000563112 TRIM8Q9BZR9 551 aa15.41■□□□□ 0.06
CLK3-210ENST00000563112 UCK2Q9BZX2 261 aa15.41■□□□□ 0.06
CLK3-210ENST00000563112 UBQLN3Q9H347 655 aa15.41■□□□□ 0.06
CLK3-210ENST00000563112 POLR3HQ9Y535 204 aaPredicted RBP15.41■□□□□ 0.06
CLK3-210ENST00000563112 INTS1Q8N201 2190 aaKnown RBP15.41■□□□□ 0.06
CLK3-210ENST00000563112 OR6C70A6NIJ9 312 aa15.4■□□□□ 0.06
CLK3-210ENST00000563112 AHRRA9YTQ3 701 aa15.4■□□□□ 0.06
CLK3-210ENST00000563112 MYO1GB0I1T2 1018 aa15.4■□□□□ 0.06
CLK3-210ENST00000563112 AZIN1O14977 448 aa15.4■□□□□ 0.06
CLK3-210ENST00000563112 ICOSLGO75144 302 aa15.4■□□□□ 0.06
CLK3-210ENST00000563112 COQ9O75208 318 aa15.4■□□□□ 0.06
CLK3-210ENST00000563112 UGT2B11O75310 529 aa15.4■□□□□ 0.06
CLK3-210ENST00000563112 TOXO94900 526 aa15.4■□□□□ 0.06
CLK3-210ENST00000563112 SLITRK5O94991 958 aa15.4■□□□□ 0.06
CLK3-210ENST00000563112 NUDT17P0C025 328 aa15.4■□□□□ 0.06
CLK3-210ENST00000563112 NTSP30990 170 aa15.4■□□□□ 0.06
CLK3-210ENST00000563112 NCBP2P52298 156 aaKnown RBP eCLIP15.4■□□□□ 0.06
CLK3-210ENST00000563112 MRPS22P82650 360 aaKnown RBP15.4■□□□□ 0.06
CLK3-210ENST00000563112 EFR3AQ14156 821 aa15.4■□□□□ 0.06
CLK3-210ENST00000563112 FNDC7Q5VTL7 733 aa15.4■□□□□ 0.06
CLK3-210ENST00000563112 FAM71E1Q6IPT2 247 aa15.4■□□□□ 0.06
CLK3-210ENST00000563112 NOXRED1Q6NXP6 359 aa15.4■□□□□ 0.06
CLK3-210ENST00000563112 IKBIPQ70UQ0 350 aa15.4■□□□□ 0.06
CLK3-210ENST00000563112 PM20D2Q8IYS1 436 aa15.4■□□□□ 0.06
CLK3-210ENST00000563112 ZNF295-AS1Q8N0V1 137 aa15.4■□□□□ 0.06
CLK3-210ENST00000563112 OR2W6PQ8NHA6 318 aa15.4■□□□□ 0.06
CLK3-210ENST00000563112 APOPT1Q96IL0 206 aa15.4■□□□□ 0.06
CLK3-210ENST00000563112 BTBD9Q96Q07 612 aa15.4■□□□□ 0.06
CLK3-210ENST00000563112 ROPN1BQ9BZX4 212 aaPredicted RBP15.4■□□□□ 0.06
CLK3-210ENST00000563112 ANKRA2Q9H9E1 313 aa15.4■□□□□ 0.06
CLK3-210ENST00000563112 ROPN1Q9HAT0 212 aaPredicted RBP15.4■□□□□ 0.06
CLK3-210ENST00000563112 FOLH1BQ9HBA9 442 aa15.4■□□□□ 0.06
CLK3-210ENST00000563112 MKS1Q9NXB0 559 aa15.4■□□□□ 0.06
CLK3-210ENST00000563112 TAS2R7Q9NYW3 318 aa15.4■□□□□ 0.06
CLK3-210ENST00000563112 A0A0G2JNJ9 132 aa15.39■□□□□ 0.05
CLK3-210ENST00000563112 PRAMEF25A6NGN4 478 aa15.39■□□□□ 0.05
CLK3-210ENST00000563112 SNPHO15079 494 aa15.39■□□□□ 0.05
CLK3-210ENST00000563112 CBR3O75828 277 aa15.39■□□□□ 0.05
CLK3-210ENST00000563112 JUNP05412 331 aaKnown RBP15.39■□□□□ 0.05
CLK3-210ENST00000563112 PRPH2P23942 346 aa15.39■□□□□ 0.05
CLK3-210ENST00000563112 PTPN6P29350 595 aa15.39■□□□□ 0.05
CLK3-210ENST00000563112 IL12BP29460 328 aa15.39■□□□□ 0.05
CLK3-210ENST00000563112 VSNL1P62760 191 aa15.39■□□□□ 0.05
CLK3-210ENST00000563112 PCLAFQ15004 111 aa15.39■□□□□ 0.05
CLK3-210ENST00000563112 RIPPLY2Q5TAB7 128 aa15.39■□□□□ 0.05
CLK3-210ENST00000563112 CLEC6AQ6EIG7 209 aa15.39■□□□□ 0.05
CLK3-210ENST00000563112 TRABD2AQ86V40 505 aa15.39■□□□□ 0.05
CLK3-210ENST00000563112 BANPQ8N9N5 519 aa15.39■□□□□ 0.05
CLK3-210ENST00000563112 OR7G2Q8NG99 324 aa15.39■□□□□ 0.05
CLK3-210ENST00000563112 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.39■□□□□ 0.05
CLK3-210ENST00000563112 VSTM2LQ96N03 204 aa15.39■□□□□ 0.05
CLK3-210ENST00000563112 TIMP4Q99727 224 aa15.39■□□□□ 0.05
CLK3-210ENST00000563112 GATA5Q9BWX5 397 aaPredicted RBP15.39■□□□□ 0.05
CLK3-210ENST00000563112 LRTM1Q9HBL6 345 aa15.39■□□□□ 0.05
CLK3-210ENST00000563112 C1orf109Q9NX04 203 aa15.39■□□□□ 0.05
CLK3-210ENST00000563112 Q9UFV3 132 aa15.39■□□□□ 0.05
CLK3-210ENST00000563112 FIS1Q9Y3D6 152 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms