RNA–Protein interactions for RNA: ENST00000562038.1

LINC01963-201, Transcript of long intergenic non-protein coding RNA 1963, humanhuman

BASIC

Gene LINC01963, Length 3,148 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01963-201ENST00000562038 TMEM156Q8N614 296 aa5.23□□□□□ -1.57
LINC01963-201ENST00000562038 C1orf52Q8N6N3 182 aaKnown RBP5.23□□□□□ -1.57
LINC01963-201ENST00000562038 CDYL2Q8N8U2 506 aa5.23□□□□□ -1.57
LINC01963-201ENST00000562038 ZNF565Q8N9K5 539 aa5.23□□□□□ -1.57
LINC01963-201ENST00000562038 CCDC63Q8NA47 563 aa5.23□□□□□ -1.57
LINC01963-201ENST00000562038 APCDD1LQ8NCL9 501 aa5.23□□□□□ -1.57
LINC01963-201ENST00000562038 OR2T11Q8NH01 316 aa5.23□□□□□ -1.57
LINC01963-201ENST00000562038 C9orf43Q8TAL5 461 aaPredicted RBP5.23□□□□□ -1.57
LINC01963-201ENST00000562038 FAM136AQ96C01 138 aa5.23□□□□□ -1.57
LINC01963-201ENST00000562038 PPP1R14BQ96C90 147 aa5.23□□□□□ -1.57
LINC01963-201ENST00000562038 MS4A4EQ96PG1 132 aa5.23□□□□□ -1.57
LINC01963-201ENST00000562038 WDR12Q9GZL7 423 aaKnown RBP5.23□□□□□ -1.57
LINC01963-201ENST00000562038 NMUR2Q9GZQ4 415 aa5.23□□□□□ -1.57
LINC01963-201ENST00000562038 EPS8L2Q9H6S3 715 aa5.23□□□□□ -1.57
LINC01963-201ENST00000562038 GRHPRQ9UBQ7 328 aa5.23□□□□□ -1.57
LINC01963-201ENST00000562038 COPS7AQ9UBW8 275 aa5.23□□□□□ -1.57
LINC01963-201ENST00000562038 CTSFQ9UBX1 484 aa5.23□□□□□ -1.57
LINC01963-201ENST00000562038 ENTPD4Q9Y227 616 aa5.23□□□□□ -1.57
LINC01963-201ENST00000562038 ZNF780BQ9Y6R6 833 aa5.23□□□□□ -1.57
LINC01963-201ENST00000562038 HTR3EA5X5Y0 456 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 OR6C70A6NIJ9 312 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 SGK494L7N484 410 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 EEDO75530 441 aaKnown RBP5.22□□□□□ -1.57
LINC01963-201ENST00000562038 NKX2-2O95096 273 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 GLAP06280 429 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 F7P08709 466 aaPredicted RBP5.22□□□□□ -1.57
LINC01963-201ENST00000562038 BCKDHAP12694 445 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 F8A1P23610 371 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 MAP2K6P52564 334 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 PPP5CP53041 499 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 POLE2P56282 527 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 SLC37A1P57057 533 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 OR4D2P58180 307 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 RCAN2Q14206 197 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 GANABQ14697 944 aaKnown RBP5.22□□□□□ -1.57
LINC01963-201ENST00000562038 DEFB134Q4QY38 66 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 AGAP7PQ5VUJ5 663 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 CES4AQ5XG92 561 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 ZNF324BQ6AW86 544 aaPredicted RBP5.22□□□□□ -1.57
LINC01963-201ENST00000562038 HEPHL1Q6MZM0 1159 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 SLC30A6Q6NXT4 461 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 RTL4Q6ZR62 310 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 TAGAPQ8N103 731 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 OR52E4Q8NGH9 312 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 PSMF1Q92530 271 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 ADIPOR1Q96A54 375 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 AGAP4Q96P64 663 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 BCL7BQ9BQE9 202 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 SLC52A3Q9NQ40 469 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 NECTIN3Q9NQS3 549 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 EXOSC3Q9NQT5 275 aaKnown RBP5.22□□□□□ -1.57
LINC01963-201ENST00000562038 MAT2BQ9NZL9 334 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 SLC12A4Q9UP95 1085 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 EXO1Q9UQ84 846 aaKnown RBP5.22□□□□□ -1.57
LINC01963-201ENST00000562038 FRYQ5TBA9 3013 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 TRBV5-3A0A0A0MS03 114 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 C15orf38-AP3S2A0A0A6YYH1 394 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 CDC14CA4D256 554 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 GOLGA8RI6L899 631 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 CFLARO15519 480 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 NME2P1O60361 137 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 IGF2P01344 180 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 ANXA4P09525 319 aaPredicted RBP5.22□□□□□ -1.57
LINC01963-201ENST00000562038 POU2F1P14859 743 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 BGNP21810 368 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 NME2P22392 152 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 ITGA3P26006 1051 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 MSX1P28360 303 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 SOX6P35712 828 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 CASRP41180 1078 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 HTR6P50406 440 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 PNLIPRP2P54317 469 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 FADDQ13158 208 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 GNA13Q14344 377 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 STK11Q15831 433 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 CPSF6Q16630 551 aaKnown RBP eCLIP5.22□□□□□ -1.57
LINC01963-201ENST00000562038 DEFB110Q30KQ9 67 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 ZNF791Q3KP31 576 aaPredicted RBP5.22□□□□□ -1.57
LINC01963-201ENST00000562038 RFTN2Q52LD8 501 aaPredicted RBP5.22□□□□□ -1.57
LINC01963-201ENST00000562038 SFT2D3Q587I9 215 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 SAXO2Q658L1 398 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 Q6ZPB1 254 aaPredicted RBP5.22□□□□□ -1.57
LINC01963-201ENST00000562038 ARPINQ7Z6K5 226 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 GALNT16Q8N428 558 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 ZNF781Q8N8C0 355 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 SUN3Q8TAQ9 357 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 PHF10Q8WUB8 498 aaKnown RBP5.22□□□□□ -1.57
LINC01963-201ENST00000562038 APIPQ96GX9 242 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 DACH2Q96NX9 599 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 ADAM19Q9H013 955 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 ZNF395Q9H8N7 513 aaPredicted RBP5.22□□□□□ -1.57
LINC01963-201ENST00000562038 KLHL3Q9UH77 587 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 ATG4BQ9Y4P1 393 aa5.22□□□□□ -1.57
LINC01963-201ENST00000562038 PTPN13Q12923 2485 aa5.21□□□□□ -1.57
LINC01963-201ENST00000562038 A0A087WZY1 265 aa5.21□□□□□ -1.57
LINC01963-201ENST00000562038 A0A096LPI6 279 aa5.21□□□□□ -1.57
LINC01963-201ENST00000562038 TRAV17A0A0B4J275 112 aa5.21□□□□□ -1.57
LINC01963-201ENST00000562038 LRRC14BA6NHZ5 514 aa5.21□□□□□ -1.57
LINC01963-201ENST00000562038 DUXAA6NLW8 204 aa5.21□□□□□ -1.57
LINC01963-201ENST00000562038 EMC8O43402 210 aa5.21□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms