RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 CCT5P48643 541 aa9.4□□□□□ -0.9
CLK3-205ENST00000561673 MASP1P48740 699 aa9.4□□□□□ -0.9
CLK3-205ENST00000561673 DNAJB13P59910 316 aa9.4□□□□□ -0.9
CLK3-205ENST00000561673 DCAF7P61962 342 aa9.4□□□□□ -0.9
CLK3-205ENST00000561673 CRYZQ08257 329 aaKnown RBP9.4□□□□□ -0.9
CLK3-205ENST00000561673 PLCXD2Q0VAA5 305 aa9.4□□□□□ -0.9
CLK3-205ENST00000561673 TOMM20Q15388 145 aa9.4□□□□□ -0.9
CLK3-205ENST00000561673 CEBPEQ15744 281 aa9.4□□□□□ -0.9
CLK3-205ENST00000561673 PRSS53Q2L4Q9 553 aa9.4□□□□□ -0.9
CLK3-205ENST00000561673 TUSC1Q2TAM9 212 aa9.4□□□□□ -0.9
CLK3-205ENST00000561673 CCDC153Q494R4 210 aa9.4□□□□□ -0.9
CLK3-205ENST00000561673 EIPR1Q53HC9 387 aa9.4□□□□□ -0.9
CLK3-205ENST00000561673 CT45A2Q5DJT8 189 aa9.4□□□□□ -0.9
CLK3-205ENST00000561673 SPDYAQ5MJ70 313 aa9.4□□□□□ -0.9
CLK3-205ENST00000561673 TIGD3Q6B0B8 471 aa9.4□□□□□ -0.9
CLK3-205ENST00000561673 VASNQ6EMK4 673 aa9.4□□□□□ -0.9
CLK3-205ENST00000561673 TMEM81Q6P7N7 255 aa9.4□□□□□ -0.9
CLK3-205ENST00000561673 FRMD7Q6ZUT3 714 aa9.4□□□□□ -0.9
CLK3-205ENST00000561673 SEM1Q6ZVN7 128 aa9.4□□□□□ -0.9
CLK3-205ENST00000561673 TRIM46Q7Z4K8 759 aa9.4□□□□□ -0.9
CLK3-205ENST00000561673 TDRPQ86YL5 185 aa9.4□□□□□ -0.9
CLK3-205ENST00000561673 DMRTC2Q8IXT2 367 aaPredicted RBP9.4□□□□□ -0.9
CLK3-205ENST00000561673 SAMD14Q8IZD0 417 aaPredicted RBP9.4□□□□□ -0.9
CLK3-205ENST00000561673 OR1J4Q8NGS1 313 aa9.4□□□□□ -0.9
CLK3-205ENST00000561673 ZNF675Q8TD23 568 aa9.4□□□□□ -0.9
CLK3-205ENST00000561673 TMBIM1Q969X1 311 aa9.4□□□□□ -0.9
CLK3-205ENST00000561673 ERP27Q96DN0 273 aa9.4□□□□□ -0.9
CLK3-205ENST00000561673 METTL7AQ9H8H3 244 aa9.4□□□□□ -0.9
CLK3-205ENST00000561673 MCCC2Q9HCC0 563 aa9.4□□□□□ -0.9
CLK3-205ENST00000561673 TNFRSF12AQ9NP84 129 aa9.4□□□□□ -0.9
CLK3-205ENST00000561673 SLC35C2Q9NQQ7 365 aa9.4□□□□□ -0.9
CLK3-205ENST00000561673 OXSMQ9NWU1 459 aa9.4□□□□□ -0.9
CLK3-205ENST00000561673 SIRT5Q9NXA8 310 aa9.4□□□□□ -0.9
CLK3-205ENST00000561673 GRID1Q9ULK0 1009 aa9.4□□□□□ -0.9
CLK3-205ENST00000561673 GPR55Q9Y2T6 319 aaPredicted RBP9.4□□□□□ -0.9
CLK3-205ENST00000561673 SLC6A5Q9Y345 797 aa9.4□□□□□ -0.9
CLK3-205ENST00000561673 DNAJC13O75165 2243 aa9.4□□□□□ -0.91
CLK3-205ENST00000561673 POLQO75417 2590 aa9.39□□□□□ -0.91
CLK3-205ENST00000561673 SMIM23A6NLE4 172 aa9.39□□□□□ -0.91
CLK3-205ENST00000561673 FAM47E-STBD1D6RA91 191 aa9.39□□□□□ -0.91
CLK3-205ENST00000561673 PLOD3O60568 738 aa9.39□□□□□ -0.91
CLK3-205ENST00000561673 CDH16O75309 829 aa9.39□□□□□ -0.91
CLK3-205ENST00000561673 CPA3P15088 417 aa9.39□□□□□ -0.91
CLK3-205ENST00000561673 BMP7P18075 431 aa9.39□□□□□ -0.91
CLK3-205ENST00000561673 KRT4P19013 534 aa9.39□□□□□ -0.91
CLK3-205ENST00000561673 DDCP20711 480 aa9.39□□□□□ -0.91
CLK3-205ENST00000561673 PTPN6P29350 595 aa9.39□□□□□ -0.91
CLK3-205ENST00000561673 MPIP34949 423 aa9.39□□□□□ -0.91
CLK3-205ENST00000561673 CORO7P57737 925 aa9.39□□□□□ -0.91
CLK3-205ENST00000561673 C2orf80Q0P641 193 aa9.39□□□□□ -0.91
CLK3-205ENST00000561673 SNTA1Q13424 505 aa9.39□□□□□ -0.91
CLK3-205ENST00000561673 ACSF3Q4G176 576 aaPredicted RBP9.39□□□□□ -0.91
CLK3-205ENST00000561673 NHSL2Q5HYW2 709 aa9.39□□□□□ -0.91
CLK3-205ENST00000561673 CFAP157Q5JU67 520 aa9.39□□□□□ -0.91
CLK3-205ENST00000561673 WIPI1Q5MNZ9 446 aaPredicted RBP9.39□□□□□ -0.91
CLK3-205ENST00000561673 RIPPLY2Q5TAB7 128 aa9.39□□□□□ -0.91
CLK3-205ENST00000561673 FAM71E1Q6IPT2 247 aa9.39□□□□□ -0.91
CLK3-205ENST00000561673 SLC30A6Q6NXT4 461 aa9.39□□□□□ -0.91
CLK3-205ENST00000561673 ANGPTL8Q6UXH0 198 aa9.39□□□□□ -0.91
CLK3-205ENST00000561673 FAM83FQ8NEG4 500 aaPredicted RBP9.39□□□□□ -0.91
CLK3-205ENST00000561673 OR7G2Q8NG99 324 aa9.39□□□□□ -0.91
CLK3-205ENST00000561673 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.39□□□□□ -0.91
CLK3-205ENST00000561673 EPS8L3Q8TE67 593 aaKnown RBP9.39□□□□□ -0.91
CLK3-205ENST00000561673 VSTM2LQ96N03 204 aa9.39□□□□□ -0.91
CLK3-205ENST00000561673 COL21A1Q96P44 957 aa9.39□□□□□ -0.91
CLK3-205ENST00000561673 BTBD9Q96Q07 612 aa9.39□□□□□ -0.91
CLK3-205ENST00000561673 SHCBP1LQ9BZQ2 653 aa9.39□□□□□ -0.91
CLK3-205ENST00000561673 L2HGDHQ9H9P8 463 aa9.39□□□□□ -0.91
CLK3-205ENST00000561673 PPCSQ9HAB8 311 aa9.39□□□□□ -0.91
CLK3-205ENST00000561673 GIMAP4Q9NUV9 329 aa9.39□□□□□ -0.91
CLK3-205ENST00000561673 KLRF1Q9NZS2 232 aa9.39□□□□□ -0.91
CLK3-205ENST00000561673 EXO1Q9UQ84 846 aaKnown RBP9.39□□□□□ -0.91
CLK3-205ENST00000561673 CACNA1CQ13936 2221 aa9.39□□□□□ -0.91
CLK3-205ENST00000561673 NCKAP5O14513 1909 aa9.39□□□□□ -0.91
CLK3-205ENST00000561673 NINQ8N4C6 2090 aa9.38□□□□□ -0.91
CLK3-205ENST00000561673 PRAMEF25A6NGN4 478 aa9.38□□□□□ -0.91
CLK3-205ENST00000561673 OR6C70A6NIJ9 312 aa9.38□□□□□ -0.91
CLK3-205ENST00000561673 HSPB2A8KAH6 182 aa9.38□□□□□ -0.91
CLK3-205ENST00000561673 MYO1GB0I1T2 1018 aa9.38□□□□□ -0.91
CLK3-205ENST00000561673 H3BQF6 201 aa9.38□□□□□ -0.91
CLK3-205ENST00000561673 COPEO14579 308 aa9.38□□□□□ -0.91
CLK3-205ENST00000561673 SNPHO15079 494 aa9.38□□□□□ -0.91
CLK3-205ENST00000561673 ERN1O75460 977 aaKnown RBP9.38□□□□□ -0.91
CLK3-205ENST00000561673 CRCPO75575 148 aa9.38□□□□□ -0.91
CLK3-205ENST00000561673 REM1O75628 298 aa9.38□□□□□ -0.91
CLK3-205ENST00000561673 EPPINO95925 133 aa9.38□□□□□ -0.91
CLK3-205ENST00000561673 CAPN3P20807 821 aa9.38□□□□□ -0.91
CLK3-205ENST00000561673 CEACAM8P31997 349 aaPredicted RBP9.38□□□□□ -0.91
CLK3-205ENST00000561673 GSTM5P46439 218 aa9.38□□□□□ -0.91
CLK3-205ENST00000561673 DLX5P56178 289 aa9.38□□□□□ -0.91
CLK3-205ENST00000561673 WNT3P56703 355 aa9.38□□□□□ -0.91
CLK3-205ENST00000561673 NAA20P61599 178 aa9.38□□□□□ -0.91
CLK3-205ENST00000561673 SLC18A2Q05940 514 aa9.38□□□□□ -0.91
CLK3-205ENST00000561673 ZNF763Q0D2J5 394 aa9.38□□□□□ -0.91
CLK3-205ENST00000561673 HSPB2Q16082 182 aa9.38□□□□□ -0.91
CLK3-205ENST00000561673 IMPG1Q17R60 797 aa9.38□□□□□ -0.91
CLK3-205ENST00000561673 ERCC6LQ2NKX8 1250 aa9.38□□□□□ -0.91
CLK3-205ENST00000561673 SLC25A35Q3KQZ1 300 aa9.38□□□□□ -0.91
CLK3-205ENST00000561673 DCST1Q5T197 706 aa9.38□□□□□ -0.91
CLK3-205ENST00000561673 LIPMQ5VYY2 423 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms