RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 TMEM229AB2RXF0 380 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 TMEM150CB9EJG8 249 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 FAM227AF5H4B4 570 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 H0YIG0 161 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 H0YJX3 145 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 PLOD2O00469 737 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 HMGN4O00479 90 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 CASC3O15234 703 aaKnown RBP7.03□□□□□ -1.28
TPM1-231ENST00000561395 CLOCKO15516 846 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 DEAF1O75398 565 aaPredicted RBP7.03□□□□□ -1.28
TPM1-231ENST00000561395 OR2B3O76000 313 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 PRSS23O95084 383 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 CPNE6O95741 557 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 GPR75O95800 540 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 LDLRP01130 860 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 ATP1B1P05026 303 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 ITGB2P05107 769 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 RPLP0P05388 317 aaKnown RBP7.03□□□□□ -1.28
TPM1-231ENST00000561395 GP1BAP07359 652 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 IFI6P09912 130 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 ANKRD34CP0C6C1 535 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 CKMT1AP12532 417 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 FOLR1P15328 257 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 ATP6V1C1P21283 382 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 AQP1P29972 269 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 PPP2R1BP30154 601 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 AVPR1BP47901 424 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 ANXA11P50995 505 aaKnown RBP7.03□□□□□ -1.28
TPM1-231ENST00000561395 ITGA1P56199 1179 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 CCL7P80098 99 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 ID2Q02363 134 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 GRM7Q14831 915 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 MYBPC3Q14896 1274 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 CYBRD1Q53TN4 286 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 ZNF628Q5EBL2 1059 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 TMTC4Q5T4D3 741 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 REEP3Q6NUK4 255 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 FKBP9P1Q75LS8 142 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 TMPRSS9Q7Z410 1059 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 ZC3H7AQ8IWR0 971 aaKnown RBP7.03□□□□□ -1.28
TPM1-231ENST00000561395 OR4N5Q8IXE1 308 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 ZNF595Q8IYB9 648 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 SHISA5Q8N114 240 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 LGI4Q8N135 537 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 FAM26EQ8N5C1 309 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 ICA1LQ8NDH6 482 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 NUP43Q8NFH3 380 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 OR4D9Q8NGE8 314 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 OR10Q1Q8NGQ4 319 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 OR1L3Q8NH93 324 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 IFI44Q8TCB0 444 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 KAT2AQ92830 837 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 RNF166Q96A37 237 aaPredicted RBP7.03□□□□□ -1.28
TPM1-231ENST00000561395 EME1Q96AY2 570 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 ANKRD9Q96BM1 317 aaPredicted RBP7.03□□□□□ -1.28
TPM1-231ENST00000561395 MVB12AQ96EY5 273 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 TMEM19Q96HH6 336 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 ZNF570Q96NI8 536 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 SLC46A1Q96NT5 459 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 DPYSL5Q9BPU6 564 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 VCXQ9H320 206 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 OR51I1Q9H343 314 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 FANCEQ9HB96 536 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 CUTCQ9NTM9 273 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 ADPRHL2Q9NX46 363 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 AKAP7Q9P0M2 348 aaPredicted RBP7.03□□□□□ -1.28
TPM1-231ENST00000561395 PTGFRNQ9P2B2 879 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 PDP2Q9P2J9 529 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 P2RX2Q9UBL9 471 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 ZNF639Q9UID6 485 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 ATXN7L1Q9ULK2 861 aaPredicted RBP7.03□□□□□ -1.28
TPM1-231ENST00000561395 MRPS33Q9Y291 106 aaKnown RBP7.03□□□□□ -1.28
TPM1-231ENST00000561395 ZNF451Q9Y4E5 1061 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 SPTBP11277 2137 aa7.03□□□□□ -1.28
TPM1-231ENST00000561395 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.02□□□□□ -1.29
TPM1-231ENST00000561395 A0A1W2PQM1 296 aa7.02□□□□□ -1.29
TPM1-231ENST00000561395 PMS2P1A4D2B8 440 aa7.02□□□□□ -1.29
TPM1-231ENST00000561395 SAC3D1A6NKF1 404 aa7.02□□□□□ -1.29
TPM1-231ENST00000561395 A8MU76 341 aa7.02□□□□□ -1.29
TPM1-231ENST00000561395 CDRT15L2A8MXV6 281 aa7.02□□□□□ -1.29
TPM1-231ENST00000561395 C5orf58C9J3I9 102 aa7.02□□□□□ -1.29
TPM1-231ENST00000561395 UPK1AO00322 258 aa7.02□□□□□ -1.29
TPM1-231ENST00000561395 SOCS2O14508 198 aa7.02□□□□□ -1.29
TPM1-231ENST00000561395 EFSO43281 561 aa7.02□□□□□ -1.29
TPM1-231ENST00000561395 ASNA1O43681 348 aa7.02□□□□□ -1.29
TPM1-231ENST00000561395 LDB3O75112 727 aa7.02□□□□□ -1.29
TPM1-231ENST00000561395 SLITRK5O94991 958 aa7.02□□□□□ -1.29
TPM1-231ENST00000561395 OPN1SWP03999 348 aa7.02□□□□□ -1.29
TPM1-231ENST00000561395 HMGN2P05204 90 aaKnown RBP7.02□□□□□ -1.29
TPM1-231ENST00000561395 BCHEP06276 602 aa7.02□□□□□ -1.29
TPM1-231ENST00000561395 TFPTP0C1Z6 253 aa7.02□□□□□ -1.29
TPM1-231ENST00000561395 OR12D1P0DN82 309 aa7.02□□□□□ -1.29
TPM1-231ENST00000561395 ZNF26P17031 533 aaPredicted RBP7.02□□□□□ -1.29
TPM1-231ENST00000561395 MATN1P21941 496 aa7.02□□□□□ -1.29
TPM1-231ENST00000561395 SOX18P35713 384 aa7.02□□□□□ -1.29
TPM1-231ENST00000561395 MAN2A2P49641 1150 aa7.02□□□□□ -1.29
TPM1-231ENST00000561395 CLCN2P51788 898 aa7.02□□□□□ -1.29
TPM1-231ENST00000561395 PRKAG1P54619 331 aa7.02□□□□□ -1.29
TPM1-231ENST00000561395 RIPPLY3P57055 190 aa7.02□□□□□ -1.29
TPM1-231ENST00000561395 MAT1AQ00266 395 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms