RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 NAE1Q13564 534 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 RUNX2Q13950 521 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 SERTAD2Q14140 314 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 DOC2AQ14183 400 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 GBX1Q14549 363 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 RPS6KA2Q15349 733 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 TOR1AIP1Q5JTV8 583 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 TSTD2Q5T7W7 516 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 ALKBH5Q6P6C2 394 aaKnown RBP4.73□□□□□ -1.65
HERC1-213ENST00000561359 AAGABQ6PD74 315 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 ANGPTL8Q6UXH0 198 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 TMEM64Q6YI46 380 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 SLC29A4Q7RTT9 530 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 IFNEQ86WN2 208 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 C9orf40Q8IXQ3 194 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 TAGAPQ8N103 731 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 ZNF619Q8N2I2 560 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 ZNF721Q8TF20 911 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 KCTD4Q8WVF5 259 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 SENP5Q96HI0 755 aaPredicted RBP4.73□□□□□ -1.65
HERC1-213ENST00000561359 TMEM41AQ96HV5 264 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 KCNC2Q96PR1 638 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 PIMREGQ9BSJ6 248 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 P2RY12Q9H244 342 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 KLHL31Q9H511 634 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 ACTR8Q9H981 624 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 LRRC40Q9H9A6 602 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 SERHLQ9NQF3 203 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 MED29Q9NX70 200 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 DDX56Q9NY93 547 aaKnown RBP4.73□□□□□ -1.65
HERC1-213ENST00000561359 MARCH4Q9P2E8 410 aaPredicted RBP4.73□□□□□ -1.65
HERC1-213ENST00000561359 ZFP69BQ9UJL9 534 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 EMC9Q9Y3B6 208 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 SNX8Q9Y5X2 465 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 PTGDR2Q9Y5Y4 395 aa4.73□□□□□ -1.65
HERC1-213ENST00000561359 PLCE1Q9P212 2302 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 A0A087X0T9 212 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 IQANK1A0A1B0GTG1 560 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 C7orf72A4D263 438 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 C4orf51C9J302 202 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 E5RI56 91 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 H3BMM5 538 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 B3GALT2O43825 422 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 RAMP1O60894 148 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 LDB3O75112 727 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 LY6HO94772 140 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 H2AFZP0C0S5 128 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 FAM228BP0C875 321 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 SMIM10L1P0DMW3 83 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 ZNF708P17019 499 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 PCMT1P22061 227 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 TCEA1P23193 301 aaKnown RBP4.72□□□□□ -1.65
HERC1-213ENST00000561359 RPS3P23396 243 aaKnown RBP eCLIP4.72□□□□□ -1.65
HERC1-213ENST00000561359 RPL22P35268 128 aaKnown RBP4.72□□□□□ -1.65
HERC1-213ENST00000561359 AHRP35869 848 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 SKIV2L2P42285 1042 aaKnown RBP4.72□□□□□ -1.65
HERC1-213ENST00000561359 CASP3P42574 277 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 EFNA4P52798 201 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 CLDN18P56856 261 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 HILS1P60008 231 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 RPP38P78345 283 aaKnown RBP4.72□□□□□ -1.65
HERC1-213ENST00000561359 IRF9Q00978 393 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 ID2Q02363 134 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 BSPH1Q075Z2 132 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 RCN2Q14257 317 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 EFTUD2Q15029 972 aaKnown RBP eCLIP4.72□□□□□ -1.65
HERC1-213ENST00000561359 RBBP5Q15291 538 aaKnown RBP4.72□□□□□ -1.65
HERC1-213ENST00000561359 CTU2Q2VPK5 515 aaKnown RBP4.72□□□□□ -1.65
HERC1-213ENST00000561359 CTSL3PQ5NE16 218 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 LRRC38Q5VT99 294 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 GTF2IRD2BQ6EKJ0 949 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 SHQ1Q6PI26 577 aaKnown RBP4.72□□□□□ -1.65
HERC1-213ENST00000561359 DARS2Q6PI48 645 aaKnown RBP4.72□□□□□ -1.65
HERC1-213ENST00000561359 USP43Q70EL4 1123 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 UBE2R2Q712K3 238 aaPredicted RBP4.72□□□□□ -1.65
HERC1-213ENST00000561359 H2AFVQ71UI9 128 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 STRA8Q7Z7C7 330 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 GTF2IRD2Q86UP8 949 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 CDKL3Q8IVW4 592 aaPredicted RBP4.72□□□□□ -1.65
HERC1-213ENST00000561359 UBQLNLQ8IYU4 475 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 RCOR2Q8IZ40 523 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 GPATCH11Q8N954 259 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 LINC01356Q8N9X3 169 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 TRPV3Q8NET8 790 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 STEAP2Q8NFT2 490 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 ABHD11Q8NFV4 315 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 SPPL2AQ8TCT8 520 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 CTNNBL1Q8WYA6 563 aaPredicted RBP4.72□□□□□ -1.65
HERC1-213ENST00000561359 FIG4Q92562 907 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 S100PBPQ96BU1 408 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 SMIM10Q96HG1 83 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 ZNF778Q96MU6 729 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 SFXN2Q96NB2 322 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 CSF3RQ99062 836 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 HAUS8Q9BT25 410 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 SOX7Q9BT81 388 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 NPLQ9BXD5 320 aaPredicted RBP4.72□□□□□ -1.65
HERC1-213ENST00000561359 HEMGNQ9BXL5 484 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 PINK1Q9BXM7 581 aa4.72□□□□□ -1.65
HERC1-213ENST00000561359 METTL7AQ9H8H3 244 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms