RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 CCL7P80098 99 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 SPIBQ01892 262 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 STX4Q12846 297 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 KCNAB2Q13303 367 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 ERV3-1Q14264 604 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 TRIM61Q5EBN2 209 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 TCTN3Q6NUS6 607 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 TTLL10Q6ZVT0 673 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 TMPRSS9Q7Z410 1059 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 ARHGAP22Q7Z5H3 698 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 WDR53Q7Z5U6 358 aaPredicted RBP11.84□□□□□ -0.51
USP3-213ENST00000559711 GALNT12Q8IXK2 581 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 GPR135Q8IZ08 494 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 VWA5B2Q8N398 1253 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 PIK3C3Q8NEB9 887 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 OR4D11Q8NGI4 311 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 GIPC3Q8TF64 312 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 SLC9A6Q92581 669 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 CDS1Q92903 461 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 ZNF501Q96CX3 271 aaPredicted RBP11.84□□□□□ -0.51
USP3-213ENST00000559711 RBM18Q96H35 190 aaKnown RBP11.84□□□□□ -0.51
USP3-213ENST00000559711 MUS81Q96NY9 551 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 PINK1Q9BXM7 581 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 RBCK1Q9BYM8 510 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 MTHFD2LQ9H903 347 aaPredicted RBP11.84□□□□□ -0.51
USP3-213ENST00000559711 ACAD8Q9UKU7 415 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 CDC14AQ9UNH5 594 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 SATB2Q9UPW6 733 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 NCOR1O75376 2440 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 DPPA5A6NC42 116 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 H3BNH8 94 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 FCMRO60667 390 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 COQ9O75208 318 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 SEMA7AO75326 666 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 EPPINO95925 133 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 SYPP08247 313 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 ALOX5P09917 674 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 PABPC4LP0CB38 370 aaKnown RBP11.84□□□□□ -0.51
USP3-213ENST00000559711 SMIM18P0DKX4 95 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 PIGAP37287 484 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 STT3AP46977 705 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 PDX1P52945 283 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 CDH12P55289 794 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 BTG2P78543 158 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 MICAQ29983 383 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 MLIPQ5VWP3 458 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 FRRS1Q6ZNA5 592 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 COMTD1Q86VU5 262 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 METTL27Q8N6F8 245 aaPredicted RBP11.84□□□□□ -0.51
USP3-213ENST00000559711 EID2Q8N6I1 236 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 ZNF555Q8NEP9 628 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 OR4D9Q8NGE8 314 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 DOK4Q8TEW6 326 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 RIT1Q92963 219 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 ZG16BQ96DA0 208 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 DHRS1Q96LJ7 313 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 OR1F2PQ96R84 312 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 SDF2Q99470 211 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 DPYSL5Q9BPU6 564 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 PSD2Q9BQI7 771 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 WFDC6Q9BQY6 131 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 SAP130Q9H0E3 1048 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 LRRN3Q9H3W5 708 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 LANCL2Q9NS86 450 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 FGF21Q9NSA1 209 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 ATXN7L1Q9ULK2 861 aaPredicted RBP11.84□□□□□ -0.51
USP3-213ENST00000559711 MYRFQ9Y2G1 1151 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 LOC100130705A0A1B0GUX0 176 aa11.83□□□□□ -0.52
USP3-213ENST00000559711 ARRDC5A6NEK1 342 aa11.83□□□□□ -0.52
USP3-213ENST00000559711 TRIM64A6NGJ6 449 aa11.83□□□□□ -0.52
USP3-213ENST00000559711 E9PQ18 207 aa11.83□□□□□ -0.52
USP3-213ENST00000559711 DSCR3O14972 297 aa11.83□□□□□ -0.52
USP3-213ENST00000559711 HYAL3O43820 417 aaPredicted RBP11.83□□□□□ -0.52
USP3-213ENST00000559711 MITFO75030 526 aaPredicted RBP11.83□□□□□ -0.52
USP3-213ENST00000559711 CDC123O75794 336 aaPredicted RBP11.83□□□□□ -0.52
USP3-213ENST00000559711 NKX2-2O95096 273 aa11.83□□□□□ -0.52
USP3-213ENST00000559711 GADD45GO95257 159 aa11.83□□□□□ -0.52
USP3-213ENST00000559711 AK1P00568 194 aa11.83□□□□□ -0.52
USP3-213ENST00000559711 ALPPP05187 535 aa11.83□□□□□ -0.52
USP3-213ENST00000559711 CKMT1AP12532 417 aa11.83□□□□□ -0.52
USP3-213ENST00000559711 ANXA8P13928 327 aa11.83□□□□□ -0.52
USP3-213ENST00000559711 ALAS2P22557 587 aa11.83□□□□□ -0.52
USP3-213ENST00000559711 PRKAR1BP31321 381 aa11.83□□□□□ -0.52
USP3-213ENST00000559711 HPCAP84074 193 aa11.83□□□□□ -0.52
USP3-213ENST00000559711 DUSP8Q13202 625 aa11.83□□□□□ -0.52
USP3-213ENST00000559711 DSG2Q14126 1118 aa11.83□□□□□ -0.52
USP3-213ENST00000559711 SERTAD2Q14140 314 aa11.83□□□□□ -0.52
USP3-213ENST00000559711 EXOSC7Q15024 291 aaKnown RBP11.83□□□□□ -0.52
USP3-213ENST00000559711 EXOC3L2Q2M3D2 409 aa11.83□□□□□ -0.52
USP3-213ENST00000559711 PROX2Q3B8N5 592 aa11.83□□□□□ -0.52
USP3-213ENST00000559711 TYW3Q6IPR3 259 aaKnown RBP11.83□□□□□ -0.52
USP3-213ENST00000559711 DHRS4L2Q6PKH6 230 aa11.83□□□□□ -0.52
USP3-213ENST00000559711 BMP8AQ7Z5Y6 402 aa11.83□□□□□ -0.52
USP3-213ENST00000559711 RBM45Q8IUH3 476 aaKnown RBP11.83□□□□□ -0.52
USP3-213ENST00000559711 LACC1Q8IV20 430 aa11.83□□□□□ -0.52
USP3-213ENST00000559711 OFCC1Q8IZS5 231 aa11.83□□□□□ -0.52
USP3-213ENST00000559711 ATG16L2Q8NAA4 619 aa11.83□□□□□ -0.52
USP3-213ENST00000559711 OR52R1Q8NGF1 315 aa11.83□□□□□ -0.52
USP3-213ENST00000559711 OR2I1PQ8NGU4 316 aa11.83□□□□□ -0.52
USP3-213ENST00000559711 PMM1Q92871 262 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms