RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 TEX101Q9BY14 249 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 MED28Q9H204 178 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 C14orf119Q9NWQ9 140 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 NKIRAS2Q9NYR9 191 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 LCTP09848 1927 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 PLOD2O00469 737 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 CREG1O75629 220 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 SCRG1O75711 98 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 SDC1P18827 310 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 RNF144AP50876 292 aaPredicted RBP10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 HLA-BQ31612 363 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 FLYWCH1Q4VC44 716 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 HACD2Q6Y1H2 254 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 TMEM102Q8N9M5 508 aaPredicted RBP10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 ZNF671Q8TAW3 534 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 CHPT1Q8WUD6 406 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 FCRL4Q96PJ5 515 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 CTRCQ99895 268 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 SLC30A2Q9BRI3 323 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 TCEAL2Q9H3H9 227 aaPredicted RBP10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 FAM118AQ9NWS6 357 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 RNF215Q9Y6U7 377 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 ZSCAN5BA6NJL1 495 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 SCAMP2O15127 329 aaKnown RBP10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 ORC5O43913 435 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 MT-ND2P03891 347 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 CSF2P04141 144 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 HSD17B1P14061 328 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 ZNF24P17028 368 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 DNAJA1P31689 397 aaKnown RBP10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 SDC2P34741 201 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 LTBRP36941 435 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 ZNF45Q02386 682 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 LGALS3BPQ08380 585 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 FIGNL1Q6PIW4 674 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 SLC30A8Q8IWU4 369 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 RCBTB1Q8NDN9 531 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 CADM4Q8NFZ8 388 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 PIGXQ8TBF5 258 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 ZFP90Q8TF47 636 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 TTYH2Q9BSA4 534 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 EDEM2Q9BV94 578 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 BEX2Q9BXY8 128 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 OR2B2Q9GZK3 357 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 SERINC1Q9NRX5 453 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 CUTCQ9NTM9 273 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 HSPB11Q9Y547 144 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 SNX11Q9Y5W9 270 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 A0A096LPI6 279 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 TRBV5-4A0A0C4DH59 114 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 FAM172BPA6NC97 362 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 FAM86C2PA6NEL3 165 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 XKRYO14609 159 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 CHST10O43529 356 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 SCO2O43819 266 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 ADAM23O75077 832 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 STX11O75558 287 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 AHRP35869 848 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 RORCP51449 518 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 ATP12AP54707 1039 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 TAS2R38P59533 333 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 SPATS1Q496A3 300 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 MAVSQ7Z434 540 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 GOLM1Q8NBJ4 401 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 CCDC74AQ96AQ1 378 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 ZNF419Q96HQ0 510 aaPredicted RBP10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 C1QTNF1Q9BXJ1 281 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 ULBP3Q9BZM4 244 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 DSN1Q9H410 356 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 SPHK1Q9NYA1 384 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 COMMD3Q9UBI1 195 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 KLF15Q9UIH9 416 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 OR5K3A6NET4 321 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 TLCD2A6NGC4 264 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 SHISA7A6NL88 538 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 I3L521 148 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 SLC1A7O00341 560 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 HCRTR2O43614 444 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 FUCA1P04066 466 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 MPLP40238 635 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 PLCXD2Q0VAA5 305 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 SERTAD2Q14140 314 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 UBE2UQ5VVX9 321 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 CCDC28AQ8IWP9 274 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 ADAMTS18Q8TE60 1221 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 OSBPL10Q9BXB5 764 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 POLR2J2Q9GZM3 115 aaKnown RBP10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 SMOC1Q9H4F8 434 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 CPNE5Q9HCH3 593 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 TIGARQ9NQ88 270 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 SDHAF3Q9NRP4 125 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 UCKL1Q9NWZ5 548 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 CACNA1HO95180 2353 aa10.07□□□□□ -0.8
CARMIL3-202ENST00000559694 TCRBV3S1A0A5B6 114 aa10.06□□□□□ -0.8
CARMIL3-202ENST00000559694 ANTXRLA6NF34 631 aa10.06□□□□□ -0.8
CARMIL3-202ENST00000559694 TP53I11O14683 189 aa10.06□□□□□ -0.8
CARMIL3-202ENST00000559694 CD47Q08722 323 aa10.06□□□□□ -0.8
CARMIL3-202ENST00000559694 TARDBPQ13148 414 aaKnown RBP eCLIP10.06□□□□□ -0.8
CARMIL3-202ENST00000559694 SNAPC1Q16533 368 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms