RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 BCKDKO14874 412 aa11.45□□□□□ -0.58
SMAD3-208ENST00000558827 DDCP20711 480 aa11.45□□□□□ -0.58
SMAD3-208ENST00000558827 ADH7P40394 386 aa11.45□□□□□ -0.58
SMAD3-208ENST00000558827 MC3RP41968 323 aa11.45□□□□□ -0.58
SMAD3-208ENST00000558827 PPICP45877 212 aa11.45□□□□□ -0.58
SMAD3-208ENST00000558827 RFX3P48380 749 aa11.45□□□□□ -0.58
SMAD3-208ENST00000558827 ZNF763Q0D2J5 394 aa11.45□□□□□ -0.58
SMAD3-208ENST00000558827 ZNF155Q12901 538 aaPredicted RBP11.45□□□□□ -0.58
SMAD3-208ENST00000558827 SNTB1Q13884 538 aaKnown RBP11.45□□□□□ -0.58
SMAD3-208ENST00000558827 GALNTL6Q49A17 601 aa11.45□□□□□ -0.58
SMAD3-208ENST00000558827 OR5M10Q6IEU7 315 aa11.45□□□□□ -0.58
SMAD3-208ENST00000558827 TMEM107Q6UX40 140 aa11.45□□□□□ -0.58
SMAD3-208ENST00000558827 NPSR1Q6W5P4 371 aa11.45□□□□□ -0.58
SMAD3-208ENST00000558827 MEX3BQ6ZN04 569 aaKnown RBP11.45□□□□□ -0.58
SMAD3-208ENST00000558827 ZNF551Q7Z340 670 aaPredicted RBP11.45□□□□□ -0.58
SMAD3-208ENST00000558827 NUP54Q7Z3B4 507 aa11.45□□□□□ -0.58
SMAD3-208ENST00000558827 TRIM46Q7Z4K8 759 aa11.45□□□□□ -0.58
SMAD3-208ENST00000558827 PACS2Q86VP3 889 aa11.45□□□□□ -0.58
SMAD3-208ENST00000558827 LURAP1LQ8IV03 231 aa11.45□□□□□ -0.58
SMAD3-208ENST00000558827 LIX1LQ8IVB5 337 aa11.45□□□□□ -0.58
SMAD3-208ENST00000558827 SLC44A2Q8IWA5 706 aaPredicted RBP11.45□□□□□ -0.58
SMAD3-208ENST00000558827 DDIASQ8IXT1 998 aa11.45□□□□□ -0.58
SMAD3-208ENST00000558827 DND1Q8IYX4 353 aaKnown RBP11.45□□□□□ -0.58
SMAD3-208ENST00000558827 FAM9CQ8IZT9 166 aa11.45□□□□□ -0.58
SMAD3-208ENST00000558827 EID3Q8N140 333 aa11.45□□□□□ -0.58
SMAD3-208ENST00000558827 TCP10LQ8TDR4 215 aa11.45□□□□□ -0.58
SMAD3-208ENST00000558827 SARAFQ96BY9 339 aa11.45□□□□□ -0.58
SMAD3-208ENST00000558827 EFHD2Q96C19 240 aaPredicted RBP11.45□□□□□ -0.58
SMAD3-208ENST00000558827 C11orf24Q96F05 449 aaPredicted RBP11.45□□□□□ -0.58
SMAD3-208ENST00000558827 TSSK3Q96PN8 268 aa11.45□□□□□ -0.58
SMAD3-208ENST00000558827 ADOQ96SZ5 270 aa11.45□□□□□ -0.58
SMAD3-208ENST00000558827 TTYH2Q9BSA4 534 aa11.45□□□□□ -0.58
SMAD3-208ENST00000558827 PPCSQ9HAB8 311 aa11.45□□□□□ -0.58
SMAD3-208ENST00000558827 LRTM1Q9HBL6 345 aa11.45□□□□□ -0.58
SMAD3-208ENST00000558827 SERHLQ9NQF3 203 aa11.45□□□□□ -0.58
SMAD3-208ENST00000558827 KLRF1Q9NZS2 232 aa11.45□□□□□ -0.58
SMAD3-208ENST00000558827 B4GALT7Q9UBV7 327 aa11.45□□□□□ -0.58
SMAD3-208ENST00000558827 PRODH2Q9UF12 536 aa11.45□□□□□ -0.58
SMAD3-208ENST00000558827 CFL2Q9Y281 166 aa11.45□□□□□ -0.58
SMAD3-208ENST00000558827 GPR55Q9Y2T6 319 aaPredicted RBP11.45□□□□□ -0.58
SMAD3-208ENST00000558827 CCL27Q9Y4X3 112 aa11.45□□□□□ -0.58
SMAD3-208ENST00000558827 A0A0G2JNJ9 132 aa11.44□□□□□ -0.58
SMAD3-208ENST00000558827 SERTM1A2A2V5 107 aa11.44□□□□□ -0.58
SMAD3-208ENST00000558827 MYO1GB0I1T2 1018 aa11.44□□□□□ -0.58
SMAD3-208ENST00000558827 SLC28A1O00337 649 aa11.44□□□□□ -0.58
SMAD3-208ENST00000558827 SUSD5O60279 629 aa11.44□□□□□ -0.58
SMAD3-208ENST00000558827 HCN1O60741 890 aa11.44□□□□□ -0.58
SMAD3-208ENST00000558827 ICOSLGO75144 302 aa11.44□□□□□ -0.58
SMAD3-208ENST00000558827 ERN1O75460 977 aaKnown RBP11.44□□□□□ -0.58
SMAD3-208ENST00000558827 NUDT17P0C025 328 aa11.44□□□□□ -0.58
SMAD3-208ENST00000558827 AGAP20933 346 aa11.44□□□□□ -0.58
SMAD3-208ENST00000558827 DRD5P21918 477 aa11.44□□□□□ -0.58
SMAD3-208ENST00000558827 PTGDSP41222 190 aa11.44□□□□□ -0.58
SMAD3-208ENST00000558827 TMED10P49755 219 aaKnown RBP11.44□□□□□ -0.58
SMAD3-208ENST00000558827 ARL13AQ5H913 290 aaPredicted RBP11.44□□□□□ -0.58
SMAD3-208ENST00000558827 C1orf185Q5T7R7 199 aa11.44□□□□□ -0.58
SMAD3-208ENST00000558827 GALNT18Q6P9A2 607 aa11.44□□□□□ -0.58
SMAD3-208ENST00000558827 PLXDC2Q6UX71 529 aa11.44□□□□□ -0.58
SMAD3-208ENST00000558827 B3GNT6Q6ZMB0 384 aa11.44□□□□□ -0.58
SMAD3-208ENST00000558827 Q6ZSR9 355 aa11.44□□□□□ -0.58
SMAD3-208ENST00000558827 LARP4Q71RC2 724 aaKnown RBP eCLIP11.44□□□□□ -0.58
SMAD3-208ENST00000558827 ZNF295-AS1Q8N0V1 137 aa11.44□□□□□ -0.58
SMAD3-208ENST00000558827 OR1J4Q8NGS1 313 aa11.44□□□□□ -0.58
SMAD3-208ENST00000558827 NEIL3Q8TAT5 605 aa11.44□□□□□ -0.58
SMAD3-208ENST00000558827 ZNF675Q8TD23 568 aa11.44□□□□□ -0.58
SMAD3-208ENST00000558827 NUDT8Q8WV74 236 aa11.44□□□□□ -0.58
SMAD3-208ENST00000558827 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.44□□□□□ -0.58
SMAD3-208ENST00000558827 CIDECQ96AQ7 238 aaPredicted RBP11.44□□□□□ -0.58
SMAD3-208ENST00000558827 HSPBAP1Q96EW2 488 aa11.44□□□□□ -0.58
SMAD3-208ENST00000558827 PKNOX2Q96KN3 472 aa11.44□□□□□ -0.58
SMAD3-208ENST00000558827 OSBPL11Q9BXB4 747 aa11.44□□□□□ -0.58
SMAD3-208ENST00000558827 PARD6BQ9BYG5 372 aa11.44□□□□□ -0.58
SMAD3-208ENST00000558827 GLIPR2Q9H4G4 154 aa11.44□□□□□ -0.58
SMAD3-208ENST00000558827 MYNNQ9NPC7 610 aa11.44□□□□□ -0.58
SMAD3-208ENST00000558827 FLRT3Q9NZU0 649 aa11.44□□□□□ -0.58
SMAD3-208ENST00000558827 Q9UFV3 132 aa11.44□□□□□ -0.58
SMAD3-208ENST00000558827 MID2Q9UJV3 735 aa11.44□□□□□ -0.58
SMAD3-208ENST00000558827 CAMK2AQ9UQM7 478 aa11.44□□□□□ -0.58
SMAD3-208ENST00000558827 C15orf41Q9Y2V0 281 aa11.44□□□□□ -0.58
SMAD3-208ENST00000558827 DCHS2Q6V1P9 2916 aa11.44□□□□□ -0.58
SMAD3-208ENST00000558827 KIAA1549Q9HCM3 1950 aa11.43□□□□□ -0.58
SMAD3-208ENST00000558827 ANKRD33BA6NCL7 494 aa11.43□□□□□ -0.58
SMAD3-208ENST00000558827 OR14I1A6ND48 311 aa11.43□□□□□ -0.58
SMAD3-208ENST00000558827 PRAMEF25A6NGN4 478 aa11.43□□□□□ -0.58
SMAD3-208ENST00000558827 FRG2CA6NGY1 282 aa11.43□□□□□ -0.58
SMAD3-208ENST00000558827 FIGNL2A6NMB9 653 aa11.43□□□□□ -0.58
SMAD3-208ENST00000558827 RGS14O43566 566 aa11.43□□□□□ -0.58
SMAD3-208ENST00000558827 RSL1D1O76021 490 aaKnown RBP11.43□□□□□ -0.58
SMAD3-208ENST00000558827 SNX4O95219 450 aa11.43□□□□□ -0.58
SMAD3-208ENST00000558827 CT45A8P0DMV1 189 aa11.43□□□□□ -0.58
SMAD3-208ENST00000558827 CT45A9P0DMV2 189 aa11.43□□□□□ -0.58
SMAD3-208ENST00000558827 CHRNB4P30926 498 aa11.43□□□□□ -0.58
SMAD3-208ENST00000558827 ARRB2P32121 409 aa11.43□□□□□ -0.58
SMAD3-208ENST00000558827 MPIP34949 423 aa11.43□□□□□ -0.58
SMAD3-208ENST00000558827 CDK9P50750 372 aaKnown RBP11.43□□□□□ -0.58
SMAD3-208ENST00000558827 AGFG1P52594 562 aaKnown RBP11.43□□□□□ -0.58
SMAD3-208ENST00000558827 KRTAP10-9P60411 292 aa11.43□□□□□ -0.58
SMAD3-208ENST00000558827 RPL38P63173 70 aaKnown RBP11.43□□□□□ -0.58
SMAD3-208ENST00000558827 RPP38P78345 283 aaKnown RBP11.43□□□□□ -0.58
SMAD3-208ENST00000558827 HSPB3Q12988 150 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms