RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 SLC41A3Q96GZ6 507 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 BCL7BQ9BQE9 202 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 NXF5Q9H1B4 397 aaKnown RBP13.3□□□□□ -0.28
SPG11-210ENST00000558319 KLHL9Q9P2J3 617 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 PCDHGA7Q9Y5G6 932 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 RIMBP3CA6NJZ7 1639 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 RIMBP3BA6NNM3 1639 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 RIMBP3Q9UFD9 1639 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 HEPACAM2A8MVW5 462 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 DENRO43583 198 aaKnown RBP13.29□□□□□ -0.28
SPG11-210ENST00000558319 PRKCAP17252 672 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 UQCRC2P22695 453 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 CAV2P51636 162 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 HTD2P86397 168 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 SLC25A11Q02978 314 aaKnown RBP13.29□□□□□ -0.28
SPG11-210ENST00000558319 PLCXD2Q0VAA5 305 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 SERPINA12Q8IW75 414 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 SAMD10Q9BYL1 202 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 RNF32Q9H0A6 362 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 HRH4Q9H3N8 390 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 FZD8Q9H461 694 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 PTGES2Q9H7Z7 377 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 RNF215Q9Y6U7 377 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 ADRB3P13945 408 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 JUPP14923 745 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 DEFB133Q30KQ1 61 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 ST7LQ8TDW4 575 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 MYLIPQ8WY64 445 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 PNPLA2Q96AD5 504 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 C3orf49Q96BT1 292 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 MROQ9BYG7 248 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 REEP4Q9H6H4 257 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 ZNF442Q9H7R0 627 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 H3BML4 177 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 PCSK2P16519 638 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 CEACAM7Q14002 265 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 BEST4Q8NFU0 473 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 OR52E2Q8NGJ4 325 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 ARHGAP23Q9P227 1491 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 LOC105369274A0A096LPK9 316 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 NPIPA5A0A0B4J1W7 369 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 A0A1W2PQU0 124 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 NPIPA7E9PJI5 369 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 FAAHO00519 579 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 TYROBPO43914 113 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 CSTAP01040 98 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 NPIPA8P0DM63 369 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 CBR1P16152 277 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 CHATP28329 748 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 CA5AP35218 305 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 GCGRP47871 477 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 CRISP1P54107 249 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 CNIH2Q6PI25 160 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 OR4N4Q8N0Y3 316 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 WDSUB1Q8N9V3 476 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 C2orf15Q8WU43 125 aaKnown RBP13.29□□□□□ -0.28
SPG11-210ENST00000558319 ARMC1Q9NVT9 282 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 SCML2Q9UQR0 700 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 CERS1P27544 350 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 PLP2Q04941 152 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 LTC4SQ16873 150 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 C6orf136Q5SQH8 315 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 BRAT1Q6PJG6 821 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 IGSF8Q969P0 613 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 CIDECQ96AQ7 238 aaPredicted RBP13.29□□□□□ -0.28
SPG11-210ENST00000558319 FCRL3Q96P31 734 aaPredicted RBP13.29□□□□□ -0.28
SPG11-210ENST00000558319 PITX2Q99697 317 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 CDC6Q99741 560 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 GPR62Q9BZJ7 368 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 QRSL1Q9H0R6 528 aaKnown RBP13.29□□□□□ -0.28
SPG11-210ENST00000558319 FANCFQ9NPI8 374 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 RXFP3Q9NSD7 469 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 MICAL3Q7RTP6 2002 aa13.29□□□□□ -0.28
SPG11-210ENST00000558319 TRAV18A0A075B6X5 111 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 SDHDO14521 159 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 PROS1P07225 676 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 GGT2P36268 569 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 RAB11BQ15907 218 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 AWAT2Q6E213 333 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 ZER1Q7Z7L7 766 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 ZFP90Q8TF47 636 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 ARL5BQ96KC2 179 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 SUCNR1Q9BXA5 334 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 HPRP00739 348 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 DPP6P42658 865 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 AKR1C2P52895 323 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 ZNF763Q0D2J5 394 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 GPR33Q49SQ1 333 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 RNASE10Q5GAN6 216 aaKnown RBP13.28□□□□□ -0.28
SPG11-210ENST00000558319 PLBD1Q6P4A8 553 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 BAIAP2L2Q6UXY1 529 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 OR5H2Q8NGV7 314 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 CHPT1Q8WUD6 406 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 SMPDL3AQ92484 453 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 KIAA1191Q96A73 305 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 PGAM5Q96HS1 289 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 RBP7Q96R05 134 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 KCNK13Q9HB14 408 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 ACTR10Q9NZ32 417 aa13.28□□□□□ -0.28
SPG11-210ENST00000558319 BCAS1O75363 584 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms