RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 PNPT1Q8TCS8 783 aaKnown RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 TAS1R2Q8TE23 839 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 FIG4Q92562 907 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 ESAMQ96AP7 390 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 TMEM159Q96B96 161 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 TAMM41Q96BW9 452 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 MISP3Q96FF7 219 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 CERS2Q96G23 380 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 BSCL2Q96G97 398 aaPredicted RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 HSFY1Q96LI6 401 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 PWWP2AQ96N64 755 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 PANX3Q96QZ0 392 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 RANBP9Q96S59 729 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 CCT8L2Q96SF2 557 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 PRMT1Q99873 361 aaKnown RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 FAM110AQ9BQ89 295 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 APOL2Q9BQE5 337 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 TRIM51Q9BSJ1 452 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 MED10Q9BTT4 135 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 NEUROG2Q9H2A3 272 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 TMEM185BQ9H7F4 350 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 CALHM2Q9HA72 323 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 ZNF160Q9HCG1 818 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 VCX3AQ9NNX9 186 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 ACP6Q9NPH0 428 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 SLAMF7Q9NQ25 335 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 GDF3Q9NR23 364 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 ABCB10Q9NRK6 738 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 C19orf12Q9NSK7 152 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 HAO2Q9NYQ3 351 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 MARCH2Q9P0N8 246 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 UVRAGQ9P2Y5 699 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 UPB1Q9UBR1 384 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 PEF1Q9UBV8 284 aaKnown RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 ERRFI1Q9UJM3 462 aaPredicted RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 MID2Q9UJV3 735 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 WIF1Q9Y5W5 379 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 A0A0B4J293 547 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 A0A0J9YVX5 310 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 PRSS38A1L453 326 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 DPPA5A6NC42 116 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 OR2AT4A6NND4 320 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 TCP11X1B4DZS4 312 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 ANKRD66B4E2M5 251 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 E5RJQ4 531 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 TMX2-CTNND1H3BSU7 103 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 J3KTA2 159 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 RAB27BO00194 218 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 SLC22A2O15244 555 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 TOX3O15405 576 aaPredicted RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 PJA2O43164 708 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 RAD51CO43502 376 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 USP12O75317 370 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 SH3BGRLO75368 114 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 MED6O75586 246 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 RASSF9O75901 435 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 NXPH2O95156 264 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 UNC5CO95185 931 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 ZWINTO95229 277 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 LUC7L3O95232 432 aaKnown RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 ACSL3O95573 720 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 B3GALT4O96024 378 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 MT-CO3P00414 261 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 NR3C1P04150 777 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 PIM1P11309 404 aaPredicted RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 SRCP12931 536 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 CCNB1P14635 433 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 CREB1P16220 341 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 EGR1P18146 543 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 TPSB2P20231 275 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 MSH3P20585 1137 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 EFNA1P20827 205 aaPredicted RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 CD247P20963 164 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 UGT1A4P22310 534 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 TCEA1P23193 301 aaKnown RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 CD82P27701 267 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 PSMB6P28072 239 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 HSD11B1P28845 292 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 SSTR4P31391 388 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 HNRNPH3P31942 346 aaKnown RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 HTR7P34969 479 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 PTGER4P35408 488 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 UGT1A3P35503 534 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 UGT1A5P35504 534 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 TGFBR2P37173 567 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 CAPZBP47756 277 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 CCT3P49368 545 aaKnown RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 RGS4P49798 205 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 CSRP3P50461 194 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 DUSP3P51452 185 aaPredicted RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 VAMP7P51809 220 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 ZNF143P52747 638 aaPredicted RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 ADPRHP54922 357 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 CDH15P55291 814 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 C21orf59P57076 290 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 DAOAP59103 153 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 AP3S2P59780 193 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 MAGOHP61326 146 aaKnown RBP2.55□□□□□ -2
PRPF39-206ENST00000554429 RAB11AP62491 216 aa2.55□□□□□ -2
PRPF39-206ENST00000554429 CSNK2A1P68400 391 aaPredicted RBP2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms