RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 BEST1O76090 585 aa9.03□□□□□ -0.96
SIX4-202ENST00000554079 UBXN7O94888 489 aa9.03□□□□□ -0.96
SIX4-202ENST00000554079 KCNK5O95279 499 aa9.03□□□□□ -0.96
SIX4-202ENST00000554079 ICAM1P05362 532 aa9.03□□□□□ -0.96
SIX4-202ENST00000554079 EIF4EP06730 217 aaKnown RBP9.03□□□□□ -0.96
SIX4-202ENST00000554079 NFICP08651 508 aa9.03□□□□□ -0.96
SIX4-202ENST00000554079 ZNF44P15621 663 aa9.03□□□□□ -0.96
SIX4-202ENST00000554079 TIMP2P16035 220 aa9.03□□□□□ -0.96
SIX4-202ENST00000554079 UQCRC2P22695 453 aa9.03□□□□□ -0.96
SIX4-202ENST00000554079 MPGP29372 298 aa9.03□□□□□ -0.96
SIX4-202ENST00000554079 ETV5P41161 510 aa9.03□□□□□ -0.96
SIX4-202ENST00000554079 ZNF33AQ06730 810 aa9.03□□□□□ -0.96
SIX4-202ENST00000554079 ELAVL2Q12926 359 aaKnown RBP9.03□□□□□ -0.96
SIX4-202ENST00000554079 GANABQ14697 944 aaKnown RBP9.03□□□□□ -0.96
SIX4-202ENST00000554079 SLC25A52Q3SY17 297 aa9.03□□□□□ -0.96
SIX4-202ENST00000554079 DEF8Q6ZN54 512 aa9.03□□□□□ -0.96
SIX4-202ENST00000554079 LAPTM4BQ86VI4 370 aa9.03□□□□□ -0.96
SIX4-202ENST00000554079 LRRC28Q86X40 367 aaPredicted RBP9.03□□□□□ -0.96
SIX4-202ENST00000554079 SLITRK4Q8IW52 837 aa9.03□□□□□ -0.96
SIX4-202ENST00000554079 PRR18Q8N4B5 295 aa9.03□□□□□ -0.96
SIX4-202ENST00000554079 DBF4BQ8NFT6 615 aa9.03□□□□□ -0.96
SIX4-202ENST00000554079 OR10H5Q8NGA6 315 aa9.03□□□□□ -0.96
SIX4-202ENST00000554079 STAG3L4Q8TBR4 150 aa9.03□□□□□ -0.96
SIX4-202ENST00000554079 NELL1Q92832 810 aa9.03□□□□□ -0.96
SIX4-202ENST00000554079 FBXO17Q96EF6 278 aa9.03□□□□□ -0.96
SIX4-202ENST00000554079 MARS2Q96GW9 593 aaKnown RBP9.03□□□□□ -0.96
SIX4-202ENST00000554079 DUSP26Q9BV47 211 aa9.03□□□□□ -0.96
SIX4-202ENST00000554079 C20orf85Q9H1P6 137 aa9.03□□□□□ -0.96
SIX4-202ENST00000554079 ISYNA1Q9NPH2 558 aa9.03□□□□□ -0.96
SIX4-202ENST00000554079 RBM22Q9NW64 420 aaKnown RBP eCLIP9.03□□□□□ -0.96
SIX4-202ENST00000554079 PPP4R1LQ9P1A2 415 aa9.03□□□□□ -0.96
SIX4-202ENST00000554079 PISDQ9UG56 409 aa9.03□□□□□ -0.96
SIX4-202ENST00000554079 NDOR1Q9UHB4 597 aa9.03□□□□□ -0.96
SIX4-202ENST00000554079 CA14Q9ULX7 337 aa9.03□□□□□ -0.96
SIX4-202ENST00000554079 FNDC3AQ9Y2H6 1198 aaKnown RBP9.03□□□□□ -0.96
SIX4-202ENST00000554079 ABHD14A-ACY1A0A1B0GW23 586 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 LRIT2A6NDA9 550 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 DDTLA6NHG4 134 aaPredicted RBP9.02□□□□□ -0.97
SIX4-202ENST00000554079 YDJCA8MPS7 323 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 C1orf196B1AJZ1 125 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 ARPC5O15511 151 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 SUV39H1O43463 412 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 SLC28A2O43868 658 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 EIF4E2O60573 245 aaKnown RBP9.02□□□□□ -0.97
SIX4-202ENST00000554079 PRAF2O60831 178 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 SC5DO75845 299 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 LATS1O95835 1130 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 GNSP15586 552 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 PAX6P26367 422 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 GABRA5P31644 462 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 CRISP1P54107 249 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 RAB8AP61006 207 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 UBE2IP63279 158 aaKnown RBP9.02□□□□□ -0.97
SIX4-202ENST00000554079 ABRAXAS2Q15018 415 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 FAM187BQ17R55 369 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 ZSWIM7Q19AV6 140 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 SLC10A6Q3KNW5 377 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 SWSAP1Q6NVH7 229 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 CEACAM20Q6UY09 585 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 WDR53Q7Z5U6 358 aaPredicted RBP9.02□□□□□ -0.97
SIX4-202ENST00000554079 NUDT13Q86X67 352 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 DEFB106AQ8N104 65 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 SYNPOQ8N3V7 929 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 ARIH2OSQ8N7S6 290 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 OR6K3Q8NGY3 331 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 TPD52L3Q96J77 140 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 LRR1Q96L50 414 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 IL4I1Q96RQ9 567 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 ABHD1Q96SE0 405 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 TSSK6Q9BXA6 273 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 NT5C1AQ9BXI3 368 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 DERL2Q9GZP9 239 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 TMPRSS5Q9H3S3 457 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 PIGMQ9H3S5 423 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 MFSD1Q9H3U5 465 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 MTG2Q9H4K7 406 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 ASIC5Q9NY37 505 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 UBQLN1Q9UMX0 589 aaKnown RBP9.02□□□□□ -0.97
SIX4-202ENST00000554079 PLEKHA6Q9Y2H5 1048 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 UBR3Q6ZT12 1888 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 A0A1B0GUH1 482 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 OR51F1A6NGY5 319 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 PRKYO43930 277 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 SCN2BO60939 215 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 GATBO75879 557 aaKnown RBP9.02□□□□□ -0.97
SIX4-202ENST00000554079 SPDEFO95238 335 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 APBB3O95704 486 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 NUDT7P0C024 238 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 EDN3P14138 238 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 CNR1P21554 472 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 PITPNBP48739 271 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 RPL34P49207 117 aaKnown RBP9.02□□□□□ -0.97
SIX4-202ENST00000554079 GEMP55040 296 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 PRR5P85299 388 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 TCP10Q12799 353 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 KRT33BQ14525 404 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 RPL13AP3Q6NVV1 102 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 OAFQ86UD1 273 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 NAGSQ8N159 534 aa9.02□□□□□ -0.97
SIX4-202ENST00000554079 TMEM185AQ8NFB2 350 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms