RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 KCNK9Q9NPC2 374 aa10.85□□□□□ -0.67
CKAP4-202ENST00000552828 NMRK1Q9NWW6 199 aa10.85□□□□□ -0.67
CKAP4-202ENST00000552828 AHSPQ9NZD4 102 aa10.85□□□□□ -0.67
CKAP4-202ENST00000552828 ERVK-19Q9WJR5 959 aa10.85□□□□□ -0.67
CKAP4-202ENST00000552828 ASB4Q9Y574 426 aa10.85□□□□□ -0.67
CKAP4-202ENST00000552828 CD8B2A6NJW9 211 aa10.84□□□□□ -0.67
CKAP4-202ENST00000552828 MANBAO00462 879 aa10.84□□□□□ -0.67
CKAP4-202ENST00000552828 UBFD1O14562 309 aaKnown RBP10.84□□□□□ -0.67
CKAP4-202ENST00000552828 TP53I11O14683 189 aa10.84□□□□□ -0.67
CKAP4-202ENST00000552828 TM9SF1O15321 606 aa10.84□□□□□ -0.67
CKAP4-202ENST00000552828 CRCPO75575 148 aa10.84□□□□□ -0.67
CKAP4-202ENST00000552828 SEMA3DO95025 777 aa10.84□□□□□ -0.67
CKAP4-202ENST00000552828 SNX4O95219 450 aa10.84□□□□□ -0.67
CKAP4-202ENST00000552828 ATE1O95260 518 aa10.84□□□□□ -0.67
CKAP4-202ENST00000552828 PDYNP01213 254 aa10.84□□□□□ -0.67
CKAP4-202ENST00000552828 BPGMP07738 259 aa10.84□□□□□ -0.67
CKAP4-202ENST00000552828 SLC35E2P0CK97 266 aa10.84□□□□□ -0.67
CKAP4-202ENST00000552828 EPXP11678 715 aa10.84□□□□□ -0.67
CKAP4-202ENST00000552828 BUD31P41223 144 aaPredicted RBP10.84□□□□□ -0.67
CKAP4-202ENST00000552828 ETV4P43268 484 aa10.84□□□□□ -0.67
CKAP4-202ENST00000552828 TRPC1P48995 793 aa10.84□□□□□ -0.67
CKAP4-202ENST00000552828 CDK9P50750 372 aaKnown RBP10.84□□□□□ -0.67
CKAP4-202ENST00000552828 ZNF136P52737 540 aa10.84□□□□□ -0.67
CKAP4-202ENST00000552828 DGKQP52824 942 aa10.84□□□□□ -0.67
CKAP4-202ENST00000552828 HNRNPH2P55795 449 aaKnown RBP10.84□□□□□ -0.67
CKAP4-202ENST00000552828 ZNF267Q14586 743 aaPredicted RBP10.84□□□□□ -0.67
CKAP4-202ENST00000552828 SF3B4Q15427 424 aaKnown RBP eCLIP10.84□□□□□ -0.67
CKAP4-202ENST00000552828 FNDC7Q5VTL7 733 aa10.84□□□□□ -0.67
CKAP4-202ENST00000552828 NSUN5P2Q63ZY6 315 aa10.84□□□□□ -0.67
CKAP4-202ENST00000552828 TMEM198Q66K66 360 aa10.84□□□□□ -0.67
CKAP4-202ENST00000552828 VASNQ6EMK4 673 aa10.84□□□□□ -0.67
CKAP4-202ENST00000552828 HDXQ7Z353 690 aa10.84□□□□□ -0.67
CKAP4-202ENST00000552828 PM20D2Q8IYS1 436 aa10.84□□□□□ -0.67
CKAP4-202ENST00000552828 TAGAPQ8N103 731 aa10.84□□□□□ -0.67
CKAP4-202ENST00000552828 ZNF597Q96LX8 424 aa10.84□□□□□ -0.67
CKAP4-202ENST00000552828 JSRP1Q96MG2 331 aaPredicted RBP10.84□□□□□ -0.67
CKAP4-202ENST00000552828 GAL3ST4Q96RP7 486 aa10.84□□□□□ -0.67
CKAP4-202ENST00000552828 ANGPTL4Q9BY76 406 aa10.84□□□□□ -0.67
CKAP4-202ENST00000552828 GSX1Q9H4S2 264 aaPredicted RBP10.84□□□□□ -0.67
CKAP4-202ENST00000552828 DDX31Q9H8H2 851 aaKnown RBP10.84□□□□□ -0.67
CKAP4-202ENST00000552828 TMBIM4Q9HC24 238 aa10.84□□□□□ -0.67
CKAP4-202ENST00000552828 FARSBQ9NSD9 589 aaKnown RBP10.84□□□□□ -0.67
CKAP4-202ENST00000552828 JKAMPQ9P055 326 aa10.84□□□□□ -0.67
CKAP4-202ENST00000552828 SLC12A4Q9UP95 1085 aa10.84□□□□□ -0.67
CKAP4-202ENST00000552828 A0A0A6YYD5 115 aa10.83□□□□□ -0.68
CKAP4-202ENST00000552828 C15orf38-AP3S2A0A0A6YYH1 394 aa10.83□□□□□ -0.68
CKAP4-202ENST00000552828 A0A1W2PR48 441 aa10.83□□□□□ -0.68
CKAP4-202ENST00000552828 WASHC1A8K0Z3 465 aa10.83□□□□□ -0.68
CKAP4-202ENST00000552828 CAPN14A8MX76 684 aa10.83□□□□□ -0.68
CKAP4-202ENST00000552828 OR10H2O60403 315 aa10.83□□□□□ -0.68
CKAP4-202ENST00000552828 NPHS1O60500 1241 aa10.83□□□□□ -0.68
CKAP4-202ENST00000552828 PRKRAO75569 313 aaKnown RBP10.83□□□□□ -0.68
CKAP4-202ENST00000552828 GOSR1O95249 250 aa10.83□□□□□ -0.68
CKAP4-202ENST00000552828 IL2RAP01589 272 aa10.83□□□□□ -0.68
CKAP4-202ENST00000552828 RAF1P04049 648 aa10.83□□□□□ -0.68
CKAP4-202ENST00000552828 HSD3B1P14060 373 aa10.83□□□□□ -0.68
CKAP4-202ENST00000552828 HSD3B2P26439 372 aa10.83□□□□□ -0.68
CKAP4-202ENST00000552828 GDF1P27539 372 aa10.83□□□□□ -0.68
CKAP4-202ENST00000552828 BSGP35613 385 aa10.83□□□□□ -0.68
CKAP4-202ENST00000552828 SERPINB4P48594 390 aa10.83□□□□□ -0.68
CKAP4-202ENST00000552828 SORDQ00796 357 aa10.83□□□□□ -0.68
CKAP4-202ENST00000552828 RPS6KA2Q15349 733 aa10.83□□□□□ -0.68
CKAP4-202ENST00000552828 TCHHL1Q5QJ38 904 aaPredicted RBP10.83□□□□□ -0.68
CKAP4-202ENST00000552828 CYP20A1Q6UW02 462 aa10.83□□□□□ -0.68
CKAP4-202ENST00000552828 PAGE2Q7Z2X7 111 aa10.83□□□□□ -0.68
CKAP4-202ENST00000552828 NUDT13Q86X67 352 aa10.83□□□□□ -0.68
CKAP4-202ENST00000552828 KIF18BQ86Y91 864 aa10.83□□□□□ -0.68
CKAP4-202ENST00000552828 NUDCD3Q8IVD9 361 aa10.83□□□□□ -0.68
CKAP4-202ENST00000552828 HOMEZQ8IX15 550 aa10.83□□□□□ -0.68
CKAP4-202ENST00000552828 MMP21Q8N119 569 aa10.83□□□□□ -0.68
CKAP4-202ENST00000552828 GBP7Q8N8V2 638 aaPredicted RBP10.83□□□□□ -0.68
CKAP4-202ENST00000552828 SPPL2AQ8TCT8 520 aa10.83□□□□□ -0.68
CKAP4-202ENST00000552828 DIO2Q92813 273 aa10.83□□□□□ -0.68
CKAP4-202ENST00000552828 MECRQ9BV79 373 aa10.83□□□□□ -0.68
CKAP4-202ENST00000552828 PLEKHF2Q9H8W4 249 aa10.83□□□□□ -0.68
CKAP4-202ENST00000552828 CALHM2Q9HA72 323 aa10.83□□□□□ -0.68
CKAP4-202ENST00000552828 CXorf21Q9HAI6 301 aa10.83□□□□□ -0.68
CKAP4-202ENST00000552828 EML4Q9HC35 981 aaKnown RBP10.83□□□□□ -0.68
CKAP4-202ENST00000552828 LYARQ9NX58 379 aaKnown RBP10.83□□□□□ -0.68
CKAP4-202ENST00000552828 VPS29Q9UBQ0 182 aa10.83□□□□□ -0.68
CKAP4-202ENST00000552828 C15orf41Q9Y2V0 281 aa10.83□□□□□ -0.68
CKAP4-202ENST00000552828 TIMM22Q9Y584 194 aa10.83□□□□□ -0.68
CKAP4-202ENST00000552828 EML6Q6ZMW3 1958 aa10.83□□□□□ -0.68
CKAP4-202ENST00000552828 C2orf92A0A1B0GVN3 265 aa10.82□□□□□ -0.68
CKAP4-202ENST00000552828 MBD3L4A6NDZ8 208 aaPredicted RBP10.82□□□□□ -0.68
CKAP4-202ENST00000552828 MBD3L3A6NE82 208 aaPredicted RBP10.82□□□□□ -0.68
CKAP4-202ENST00000552828 TUBAL3A6NHL2 446 aa10.82□□□□□ -0.68
CKAP4-202ENST00000552828 MBD3L5A6NJ08 208 aaPredicted RBP10.82□□□□□ -0.68
CKAP4-202ENST00000552828 BIRC5O15392 142 aa10.82□□□□□ -0.68
CKAP4-202ENST00000552828 TMPRSS11DO60235 418 aa10.82□□□□□ -0.68
CKAP4-202ENST00000552828 EEDO75530 441 aaKnown RBP10.82□□□□□ -0.68
CKAP4-202ENST00000552828 LRATO95237 230 aa10.82□□□□□ -0.68
CKAP4-202ENST00000552828 IL18BPO95998 194 aa10.82□□□□□ -0.68
CKAP4-202ENST00000552828 FAM58BPP0C7Q3 252 aa10.82□□□□□ -0.68
CKAP4-202ENST00000552828 NR2F6P10588 404 aa10.82□□□□□ -0.68
CKAP4-202ENST00000552828 TACR1P25103 407 aa10.82□□□□□ -0.68
CKAP4-202ENST00000552828 HOXC12P31275 282 aa10.82□□□□□ -0.68
CKAP4-202ENST00000552828 SERPINB5P36952 375 aa10.82□□□□□ -0.68
CKAP4-202ENST00000552828 WNT3P56703 355 aa10.82□□□□□ -0.68
CKAP4-202ENST00000552828 FBXW4P57775 412 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms