RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 CPSF2Q9P2I0 782 aaKnown RBP7.97□□□□□ -1.13
TMEM116-217ENST00000552801 CFL2Q9Y281 166 aa7.97□□□□□ -1.13
TMEM116-217ENST00000552801 TNPO3Q9Y5L0 923 aaKnown RBP7.97□□□□□ -1.13
TMEM116-217ENST00000552801 NPFFR2Q9Y5X5 522 aa7.97□□□□□ -1.13
TMEM116-217ENST00000552801 CHCHD2Q9Y6H1 151 aaPredicted RBP7.97□□□□□ -1.13
TMEM116-217ENST00000552801 CELSR1Q9NYQ6 3014 aa7.97□□□□□ -1.13
TMEM116-217ENST00000552801 FREM3P0C091 2139 aa7.97□□□□□ -1.13
TMEM116-217ENST00000552801 HIVEP1P15822 2718 aa7.97□□□□□ -1.13
TMEM116-217ENST00000552801 EXOC1LA0A1B0GW35 172 aa7.97□□□□□ -1.13
TMEM116-217ENST00000552801 ANKRD33BA6NCL7 494 aa7.97□□□□□ -1.13
TMEM116-217ENST00000552801 CXorf49A8MYA2 514 aaPredicted RBP7.97□□□□□ -1.13
TMEM116-217ENST00000552801 H0Y3Z8 333 aa7.97□□□□□ -1.13
TMEM116-217ENST00000552801 HRKO00198 91 aa7.97□□□□□ -1.13
TMEM116-217ENST00000552801 PLPP1O14494 284 aa7.97□□□□□ -1.13
TMEM116-217ENST00000552801 GNB5O14775 395 aa7.97□□□□□ -1.13
TMEM116-217ENST00000552801 PROM1O43490 865 aa7.97□□□□□ -1.13
TMEM116-217ENST00000552801 TYROBPO43914 113 aa7.97□□□□□ -1.13
TMEM116-217ENST00000552801 ZNF354AO60765 605 aaPredicted RBP7.97□□□□□ -1.13
TMEM116-217ENST00000552801 PRAMEF4O60810 478 aa7.97□□□□□ -1.13
TMEM116-217ENST00000552801 PRKRAO75569 313 aaKnown RBP7.97□□□□□ -1.13
TMEM116-217ENST00000552801 TBX6O95947 436 aaPredicted RBP7.97□□□□□ -1.13
TMEM116-217ENST00000552801 EPXP11678 715 aa7.97□□□□□ -1.13
TMEM116-217ENST00000552801 FOSL1P15407 271 aa7.97□□□□□ -1.13
TMEM116-217ENST00000552801 ENDOUP21128 410 aaKnown RBP7.97□□□□□ -1.13
TMEM116-217ENST00000552801 CTSSP25774 331 aa7.97□□□□□ -1.13
TMEM116-217ENST00000552801 CCNG1P51959 295 aa7.97□□□□□ -1.13
TMEM116-217ENST00000552801 DIO3P55073 304 aa7.97□□□□□ -1.13
TMEM116-217ENST00000552801 SLC37A1P57057 533 aa7.97□□□□□ -1.13
TMEM116-217ENST00000552801 FBXW4P57775 412 aa7.97□□□□□ -1.13
TMEM116-217ENST00000552801 NAB1Q13506 487 aa7.97□□□□□ -1.13
TMEM116-217ENST00000552801 EBPQ15125 230 aaKnown RBP7.97□□□□□ -1.13
TMEM116-217ENST00000552801 PRAMEF9Q5VWM5 478 aa7.97□□□□□ -1.13
TMEM116-217ENST00000552801 ENPP6Q6UWR7 440 aa7.97□□□□□ -1.13
TMEM116-217ENST00000552801 PAMR1Q6UXH9 720 aa7.97□□□□□ -1.13
TMEM116-217ENST00000552801 CMC1Q7Z7K0 106 aa7.97□□□□□ -1.13
TMEM116-217ENST00000552801 OR14L1PQ8NHC6 308 aa7.97□□□□□ -1.13
TMEM116-217ENST00000552801 MZB1Q8WU39 189 aa7.97□□□□□ -1.13
TMEM116-217ENST00000552801 UBTD2Q8WUN7 234 aa7.97□□□□□ -1.13
TMEM116-217ENST00000552801 ABTB1Q969K4 478 aaPredicted RBP7.97□□□□□ -1.13
TMEM116-217ENST00000552801 TP53INP1Q96A56 240 aa7.97□□□□□ -1.13
TMEM116-217ENST00000552801 MRRFQ96E11 262 aaKnown RBP7.97□□□□□ -1.13
TMEM116-217ENST00000552801 UBXN10Q96LJ8 280 aa7.97□□□□□ -1.13
TMEM116-217ENST00000552801 ANKRD27Q96NW4 1050 aa7.97□□□□□ -1.13
TMEM116-217ENST00000552801 TMEM237Q96Q45 408 aa7.97□□□□□ -1.13
TMEM116-217ENST00000552801 SECISBP2Q96T21 854 aaKnown RBP7.97□□□□□ -1.13
TMEM116-217ENST00000552801 MYCBPQ99417 103 aaPredicted RBP7.97□□□□□ -1.13
TMEM116-217ENST00000552801 BRINP2Q9C0B6 783 aa7.97□□□□□ -1.13
TMEM116-217ENST00000552801 IPPKQ9H8X2 491 aa7.97□□□□□ -1.13
TMEM116-217ENST00000552801 PFDN4Q9NQP4 134 aa7.97□□□□□ -1.13
TMEM116-217ENST00000552801 PSMC3IPQ9P2W1 217 aaPredicted RBP7.97□□□□□ -1.13
TMEM116-217ENST00000552801 NDRG3Q9UGV2 375 aa7.97□□□□□ -1.13
TMEM116-217ENST00000552801 BCAP29Q9UHQ4 241 aa7.97□□□□□ -1.13
TMEM116-217ENST00000552801 CNOT11Q9UKZ1 510 aaKnown RBP7.97□□□□□ -1.13
TMEM116-217ENST00000552801 PSME2Q9UL46 239 aa7.97□□□□□ -1.13
TMEM116-217ENST00000552801 ZNF232Q9UNY5 417 aa7.97□□□□□ -1.13
TMEM116-217ENST00000552801 EIF3LQ9Y262 564 aaKnown RBP7.97□□□□□ -1.13
TMEM116-217ENST00000552801 SLC6A5Q9Y345 797 aa7.97□□□□□ -1.13
TMEM116-217ENST00000552801 NCKAP5O14513 1909 aa7.96□□□□□ -1.14
TMEM116-217ENST00000552801 CCDC189A1A4V9 331 aa7.96□□□□□ -1.14
TMEM116-217ENST00000552801 LRRC3CA6NJW4 275 aa7.96□□□□□ -1.14
TMEM116-217ENST00000552801 FAM159BA6NKW6 160 aa7.96□□□□□ -1.14
TMEM116-217ENST00000552801 H0YIV9 168 aa7.96□□□□□ -1.14
TMEM116-217ENST00000552801 ARHGEF9O43307 516 aa7.96□□□□□ -1.14
TMEM116-217ENST00000552801 UGDHO60701 494 aa7.96□□□□□ -1.14
TMEM116-217ENST00000552801 ATP5HO75947 161 aa7.96□□□□□ -1.14
TMEM116-217ENST00000552801 GOSR1O95249 250 aa7.96□□□□□ -1.14
TMEM116-217ENST00000552801 CLDN9O95484 217 aa7.96□□□□□ -1.14
TMEM116-217ENST00000552801 ESRRBO95718 433 aa7.96□□□□□ -1.14
TMEM116-217ENST00000552801 AIFM1O95831 613 aa7.96□□□□□ -1.14
TMEM116-217ENST00000552801 ACTL6AO96019 429 aa7.96□□□□□ -1.14
TMEM116-217ENST00000552801 TMIGD3P0DMS9 266 aaPredicted RBP7.96□□□□□ -1.14
TMEM116-217ENST00000552801 TYK2P29597 1187 aa7.96□□□□□ -1.14
TMEM116-217ENST00000552801 SSTR4P31391 388 aa7.96□□□□□ -1.14
TMEM116-217ENST00000552801 GALNSP34059 522 aa7.96□□□□□ -1.14
TMEM116-217ENST00000552801 PHBP35232 272 aa7.96□□□□□ -1.14
TMEM116-217ENST00000552801 KRT20P35900 424 aa7.96□□□□□ -1.14
TMEM116-217ENST00000552801 CDK9P50750 372 aaKnown RBP7.96□□□□□ -1.14
TMEM116-217ENST00000552801 XKP51811 444 aa7.96□□□□□ -1.14
TMEM116-217ENST00000552801 AGFG1P52594 562 aaKnown RBP7.96□□□□□ -1.14
TMEM116-217ENST00000552801 ALDH18A1P54886 795 aaKnown RBP7.96□□□□□ -1.14
TMEM116-217ENST00000552801 WNT3P56703 355 aa7.96□□□□□ -1.14
TMEM116-217ENST00000552801 EEF1A1P68104 462 aaKnown RBP7.96□□□□□ -1.14
TMEM116-217ENST00000552801 SRYQ05066 204 aa7.96□□□□□ -1.14
TMEM116-217ENST00000552801 CRYZQ08257 329 aaKnown RBP7.96□□□□□ -1.14
TMEM116-217ENST00000552801 FOXD4Q12950 439 aaPredicted RBP7.96□□□□□ -1.14
TMEM116-217ENST00000552801 CUL3Q13618 768 aa7.96□□□□□ -1.14
TMEM116-217ENST00000552801 GTF2H2Q13888 395 aa7.96□□□□□ -1.14
TMEM116-217ENST00000552801 PCBP2Q15366 365 aaKnown RBP eCLIP7.96□□□□□ -1.14
TMEM116-217ENST00000552801 ZKSCAN8Q15776 578 aaPredicted RBP7.96□□□□□ -1.14
TMEM116-217ENST00000552801 ARSJQ5FYB0 599 aaPredicted RBP7.96□□□□□ -1.14
TMEM116-217ENST00000552801 CCNYL2Q5T2Q4 361 aa7.96□□□□□ -1.14
TMEM116-217ENST00000552801 EEF1A1P5Q5VTE0 462 aa7.96□□□□□ -1.14
TMEM116-217ENST00000552801 NSUN5P2Q63ZY6 315 aa7.96□□□□□ -1.14
TMEM116-217ENST00000552801 GTF2H2CQ6P1K8 395 aa7.96□□□□□ -1.14
TMEM116-217ENST00000552801 ANGPTL8Q6UXH0 198 aa7.96□□□□□ -1.14
TMEM116-217ENST00000552801 TMEM64Q6YI46 380 aa7.96□□□□□ -1.14
TMEM116-217ENST00000552801 CYS1Q717R9 158 aa7.96□□□□□ -1.14
TMEM116-217ENST00000552801 P4HA3Q7Z4N8 544 aa7.96□□□□□ -1.14
TMEM116-217ENST00000552801 ISCA2Q86U28 154 aa7.96□□□□□ -1.14
TMEM116-217ENST00000552801 PRR22Q8IZ63 422 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms