RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 ALDOAP04075 364 aaKnown RBP6.95□□□□□ -1.3
NEK3-201ENST00000550331 ATP1B1P05026 303 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 KLK1P06870 262 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 RHOXF2BP0C7M4 288 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 CPN1P15169 458 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 PORP16435 677 aaPredicted RBP6.95□□□□□ -1.3
NEK3-201ENST00000550331 BMP7P18075 431 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 KRT15P19012 456 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 NT5EP21589 574 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 GPX3P22352 226 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 TACR1P25103 407 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 CTSSP25774 331 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 ABCD3P28288 659 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 PTPN6P29350 595 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 TYK2P29597 1187 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 ADSLP30566 484 aaPredicted RBP6.95□□□□□ -1.3
NEK3-201ENST00000550331 PHBP35232 272 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 OPRM1P35372 400 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 GCKP35557 465 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 CASP3P42574 277 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 XKP51811 444 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 WNT3P56703 355 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 MAP4K2Q12851 820 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 SNTA1Q13424 505 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 RCAN2Q14206 197 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 TECRLQ5HYJ1 363 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 CCNYL2Q5T2Q4 361 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 BICRALQ6AI39 1079 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 SLC30A6Q6NXT4 461 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 SLC48A1Q6P1K1 146 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 NUP54Q7Z3B4 507 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 METTL4Q8N3J2 472 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 PTGR2Q8N8N7 351 aaPredicted RBP6.95□□□□□ -1.3
NEK3-201ENST00000550331 OR52B6Q8NGF0 335 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 OR1J4Q8NGS1 313 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 ZPLD1Q8TCW7 415 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 ABTB1Q969K4 478 aaPredicted RBP6.95□□□□□ -1.3
NEK3-201ENST00000550331 ATP6V1E2Q96A05 226 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 ISL2Q96A47 359 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 WDYHV1Q96HA8 205 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 ZFP3Q96NJ6 502 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 TRIB1Q96RU8 372 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 UGT2B28Q9BY64 529 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 NOL11Q9H8H0 719 aaKnown RBP6.95□□□□□ -1.3
NEK3-201ENST00000550331 METTL7AQ9H8H3 244 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 CALHM2Q9HA72 323 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 JKAMPQ9P055 326 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 CPSF2Q9P2I0 782 aaKnown RBP6.95□□□□□ -1.3
NEK3-201ENST00000550331 PYCARDQ9ULZ3 195 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 CAMK2AQ9UQM7 478 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 SLC6A5Q9Y345 797 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 MPDZO75970 2070 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 TLN2Q9Y4G6 2542 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 STAB1Q9NY15 2570 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 EEF1E1-BLOC1S5C9J1V9 151 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 ACOX3O15254 700 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 EEF1E1O43324 174 aaKnown RBP6.94□□□□□ -1.3
NEK3-201ENST00000550331 ERN1O75460 977 aaKnown RBP6.94□□□□□ -1.3
NEK3-201ENST00000550331 OTCP00480 354 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 ABCB1P08183 1280 aaPredicted RBP6.94□□□□□ -1.3
NEK3-201ENST00000550331 RBP1P09455 135 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 CYP4B1P13584 511 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 CSNK2A2P19784 350 aaPredicted RBP6.94□□□□□ -1.3
NEK3-201ENST00000550331 S1PR1P21453 382 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 ARL1P40616 181 aaPredicted RBP6.94□□□□□ -1.3
NEK3-201ENST00000550331 MAGEA12P43365 314 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 CCNG1P51959 295 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 MAPK12P53778 367 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 NAGLUP54802 743 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 DCAF7P61962 342 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 EEF1A1P68104 462 aaKnown RBP6.94□□□□□ -1.3
NEK3-201ENST00000550331 PLCXD2Q0VAA5 305 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 MGAT2Q10469 447 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 IFT88Q13099 833 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 TRAF3Q13114 568 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 TOMM20Q15388 145 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 TRADDQ15628 312 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 UAP1Q16222 522 aaPredicted RBP6.94□□□□□ -1.3
NEK3-201ENST00000550331 TSNAXIP1Q2TAA8 658 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 PRICKLE4Q2TBC4 344 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 EIPR1Q53HC9 387 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 WIPI1Q5MNZ9 446 aaPredicted RBP6.94□□□□□ -1.3
NEK3-201ENST00000550331 DCST1Q5T197 706 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 EEF1A1P5Q5VTE0 462 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 TTC19Q6DKK2 380 aaPredicted RBP6.94□□□□□ -1.3
NEK3-201ENST00000550331 SCIMPQ6UWF3 145 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 ENPP6Q6UWR7 440 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 ANGPTL8Q6UXH0 198 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 CLEC9AQ6UXN8 241 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 ZNF572Q7Z3I7 529 aaPredicted RBP6.94□□□□□ -1.3
NEK3-201ENST00000550331 SYT9Q86SS6 491 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 PRIMA1Q86XR5 153 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 RELL1Q8IUW5 271 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 PRR22Q8IZ63 422 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 LRRN4CLQ8ND94 238 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 FAM83FQ8NEG4 500 aaPredicted RBP6.94□□□□□ -1.3
NEK3-201ENST00000550331 NUDT8Q8WV74 236 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 HGDQ93099 445 aa6.94□□□□□ -1.3
NEK3-201ENST00000550331 MRRFQ96E11 262 aaKnown RBP6.94□□□□□ -1.3
NEK3-201ENST00000550331 DTNBP1Q96EV8 351 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms