RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 STACQ99469 402 aa28.36■■■□□ 2.13
CCM2-219ENST00000544363 SEMA6AQ9H2E6 1030 aa28.36■■■□□ 2.13
CCM2-219ENST00000544363 RUBCNLQ9H714 662 aa28.36■■■□□ 2.13
CCM2-219ENST00000544363 PCDHGA8Q9Y5G5 932 aa28.36■■■□□ 2.13
CCM2-219ENST00000544363 VSTM2BA6NLU5 285 aa28.35■■■□□ 2.13
CCM2-219ENST00000544363 ALBP02768 609 aa28.35■■■□□ 2.13
CCM2-219ENST00000544363 SEMG1P04279 462 aa28.35■■■□□ 2.13
CCM2-219ENST00000544363 CHRM4P08173 479 aa28.35■■■□□ 2.13
CCM2-219ENST00000544363 CDK4P11802 303 aa28.35■■■□□ 2.13
CCM2-219ENST00000544363 EMDP50402 254 aa28.35■■■□□ 2.13
CCM2-219ENST00000544363 ELAVL1Q15717 326 aaKnown RBP28.35■■■□□ 2.13
CCM2-219ENST00000544363 DCAF12Q5T6F0 453 aa28.35■■■□□ 2.13
CCM2-219ENST00000544363 LPCAT4Q643R3 524 aa28.35■■■□□ 2.13
CCM2-219ENST00000544363 LCN10Q6JVE6 187 aa28.35■■■□□ 2.13
CCM2-219ENST00000544363 FKBP9P1Q75LS8 142 aa28.35■■■□□ 2.13
CCM2-219ENST00000544363 C16orf62Q7Z3J2 963 aa28.35■■■□□ 2.13
CCM2-219ENST00000544363 LZICQ8WZA0 190 aa28.35■■■□□ 2.13
CCM2-219ENST00000544363 HOXB13Q92826 284 aaPredicted RBP28.35■■■□□ 2.13
CCM2-219ENST00000544363 FKBP10Q96AY3 582 aa28.35■■■□□ 2.13
CCM2-219ENST00000544363 DEPDC7Q96QD5 511 aa28.35■■■□□ 2.13
CCM2-219ENST00000544363 ULBP3Q9BZM4 244 aa28.35■■■□□ 2.13
CCM2-219ENST00000544363 SLC26A1Q9H2B4 701 aa28.35■■■□□ 2.13
CCM2-219ENST00000544363 DUSP22Q9NRW4 184 aa28.35■■■□□ 2.13
CCM2-219ENST00000544363 CALML5Q9NZT1 146 aa28.35■■■□□ 2.13
CCM2-219ENST00000544363 A0A0G2JPF8 293 aa28.34■■■□□ 2.13
CCM2-219ENST00000544363 PCNX2A6NKB5 2137 aa28.34■■■□□ 2.13
CCM2-219ENST00000544363 HNRNPCL2B2RXH8 293 aa28.34■■■□□ 2.13
CCM2-219ENST00000544363 HNRNPCL3B7ZW38 293 aa28.34■■■□□ 2.13
CCM2-219ENST00000544363 PRAMEF2O60811 474 aa28.34■■■□□ 2.13
CCM2-219ENST00000544363 KLK3P07288 261 aaPredicted RBP28.34■■■□□ 2.13
CCM2-219ENST00000544363 HNRNPCL4P0DMR1 293 aa28.34■■■□□ 2.13
CCM2-219ENST00000544363 PEX2P28328 305 aa28.34■■■□□ 2.13
CCM2-219ENST00000544363 ETV5P41161 510 aa28.34■■■□□ 2.13
CCM2-219ENST00000544363 ZNF155Q12901 538 aaPredicted RBP28.34■■■□□ 2.13
CCM2-219ENST00000544363 ATP6AP1Q15904 470 aa28.34■■■□□ 2.13
CCM2-219ENST00000544363 OGFRL1Q5TC84 451 aaPredicted RBP28.34■■■□□ 2.13
CCM2-219ENST00000544363 SHISA6Q6ZSJ9 500 aa28.34■■■□□ 2.13
CCM2-219ENST00000544363 DEFB124Q8NES8 71 aa28.34■■■□□ 2.13
CCM2-219ENST00000544363 PCDHGB3Q9Y5G1 929 aa28.34■■■□□ 2.13
CCM2-219ENST00000544363 HEMK1Q9Y5R4 338 aaPredicted RBP28.34■■■□□ 2.13
CCM2-219ENST00000544363 DYRK3O43781 588 aa28.33■■■□□ 2.13
CCM2-219ENST00000544363 H6PDO95479 791 aa28.33■■■□□ 2.13
CCM2-219ENST00000544363 MAGEA2P43356 314 aa28.33■■■□□ 2.13
CCM2-219ENST00000544363 SLCO6A1Q86UG4 719 aa28.33■■■□□ 2.13
CCM2-219ENST00000544363 OR7G1Q8NGA0 311 aa28.33■■■□□ 2.13
CCM2-219ENST00000544363 CENPNQ96H22 339 aaPredicted RBP28.33■■■□□ 2.13
CCM2-219ENST00000544363 TACO1Q9BSH4 297 aaKnown RBP28.33■■■□□ 2.13
CCM2-219ENST00000544363 OR10A5Q9H207 317 aa28.33■■■□□ 2.13
CCM2-219ENST00000544363 FOLH1BQ9HBA9 442 aa28.33■■■□□ 2.13
CCM2-219ENST00000544363 B3GALT1Q9Y5Z6 326 aa28.33■■■□□ 2.13
CCM2-219ENST00000544363 CLCA3PQ9Y6N3 262 aa28.33■■■□□ 2.13
CCM2-219ENST00000544363 LOC105378220A0A1B0GUY1 285 aaPredicted RBP28.32■■■□□ 2.12
CCM2-219ENST00000544363 FAM149AA5PLN7 773 aa28.32■■■□□ 2.12
CCM2-219ENST00000544363 A8MUA0 341 aa28.32■■■□□ 2.12
CCM2-219ENST00000544363 A8MVJ9 347 aa28.32■■■□□ 2.12
CCM2-219ENST00000544363 SOX30O94993 753 aa28.32■■■□□ 2.12
CCM2-219ENST00000544363 MFN2O95140 757 aa28.32■■■□□ 2.12
CCM2-219ENST00000544363 LDLRP01130 860 aa28.32■■■□□ 2.12
CCM2-219ENST00000544363 CAPNS1P04632 268 aa28.32■■■□□ 2.12
CCM2-219ENST00000544363 ETS2P15036 469 aa28.32■■■□□ 2.12
CCM2-219ENST00000544363 KCNJ10P78508 379 aa28.32■■■□□ 2.12
CCM2-219ENST00000544363 ARHGAP11BQ3KRB8 267 aa28.32■■■□□ 2.12
CCM2-219ENST00000544363 MLIPQ5VWP3 458 aa28.32■■■□□ 2.12
CCM2-219ENST00000544363 OLIG3Q7RTU3 272 aa28.32■■■□□ 2.12
CCM2-219ENST00000544363 KRT73Q86Y46 540 aa28.32■■■□□ 2.12
CCM2-219ENST00000544363 ZNF615Q8N8J6 731 aa28.32■■■□□ 2.12
CCM2-219ENST00000544363 SENP5Q96HI0 755 aaPredicted RBP28.32■■■□□ 2.12
CCM2-219ENST00000544363 ZPBPQ9BS86 351 aa28.32■■■□□ 2.12
CCM2-219ENST00000544363 LMF2Q9BU23 707 aaKnown RBP28.32■■■□□ 2.12
CCM2-219ENST00000544363 BTBD2Q9BX70 525 aa28.32■■■□□ 2.12
CCM2-219ENST00000544363 VCX3BQ9H321 246 aa28.32■■■□□ 2.12
CCM2-219ENST00000544363 SOX17Q9H6I2 414 aaPredicted RBP28.32■■■□□ 2.12
CCM2-219ENST00000544363 AKIRIN1Q9H9L7 192 aaPredicted RBP28.32■■■□□ 2.12
CCM2-219ENST00000544363 IL1RAPQ9NPH3 570 aa28.32■■■□□ 2.12
CCM2-219ENST00000544363 GPC6Q9Y625 555 aaPredicted RBP28.32■■■□□ 2.12
CCM2-219ENST00000544363 PROB1E7EW31 1015 aa28.32■■■□□ 2.12
CCM2-219ENST00000544363 CLOCKO15516 846 aa28.32■■■□□ 2.12
CCM2-219ENST00000544363 SERPINB7O75635 380 aa28.32■■■□□ 2.12
CCM2-219ENST00000544363 NKX2-2O95096 273 aa28.32■■■□□ 2.12
CCM2-219ENST00000544363 HEXBP07686 556 aa28.32■■■□□ 2.12
CCM2-219ENST00000544363 LRRC36Q1X8D7 754 aa28.32■■■□□ 2.12
CCM2-219ENST00000544363 HES3Q5TGS1 186 aa28.32■■■□□ 2.12
CCM2-219ENST00000544363 MRPL14Q6P1L8 145 aaKnown RBP28.32■■■□□ 2.12
CCM2-219ENST00000544363 ZDHHC21Q8IVQ6 265 aa28.32■■■□□ 2.12
CCM2-219ENST00000544363 SMYD1Q8NB12 490 aa28.32■■■□□ 2.12
CCM2-219ENST00000544363 FBXL20Q96IG2 436 aa28.32■■■□□ 2.12
CCM2-219ENST00000544363 COL21A1Q96P44 957 aa28.32■■■□□ 2.12
CCM2-219ENST00000544363 SLC38A1Q9H2H9 487 aa28.32■■■□□ 2.12
CCM2-219ENST00000544363 IDSB3KWA1 339 aa28.31■■■□□ 2.12
CCM2-219ENST00000544363 CNOT3O75175 753 aaKnown RBP28.31■■■□□ 2.12
CCM2-219ENST00000544363 DEAF1O75398 565 aaPredicted RBP28.31■■■□□ 2.12
CCM2-219ENST00000544363 CLPSP04118 112 aa28.31■■■□□ 2.12
CCM2-219ENST00000544363 JMJD7P0C870 316 aa28.31■■■□□ 2.12
CCM2-219ENST00000544363 FOXL2P58012 376 aa28.31■■■□□ 2.12
CCM2-219ENST00000544363 ARMC8Q8IUR7 673 aa28.31■■■□□ 2.12
CCM2-219ENST00000544363 COX18Q8N8Q8 333 aa28.31■■■□□ 2.12
CCM2-219ENST00000544363 CHDHQ8NE62 594 aaPredicted RBP28.31■■■□□ 2.12
CCM2-219ENST00000544363 GPR151Q8TDV0 419 aa28.31■■■□□ 2.12
CCM2-219ENST00000544363 VSTM2LQ96N03 204 aa28.31■■■□□ 2.12
CCM2-219ENST00000544363 TAAR9Q96RI9 348 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms