RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 ETFDHQ16134 617 aa11.97□□□□□ -0.49
SMG8-202ENST00000543872 FAM27D1Q5T7N8 215 aa11.97□□□□□ -0.49
SMG8-202ENST00000543872 PGBD2Q6P3X8 592 aa11.97□□□□□ -0.49
SMG8-202ENST00000543872 KLBQ86Z14 1044 aa11.97□□□□□ -0.49
SMG8-202ENST00000543872 APOBEC3FQ8IUX4 373 aaKnown RBP11.97□□□□□ -0.49
SMG8-202ENST00000543872 YIPF5Q969M3 257 aa11.97□□□□□ -0.49
SMG8-202ENST00000543872 SLC38A2Q96QD8 506 aa11.97□□□□□ -0.49
SMG8-202ENST00000543872 MAGEH1Q9H213 219 aa11.97□□□□□ -0.49
SMG8-202ENST00000543872 OSGEPL1Q9H4B0 414 aa11.97□□□□□ -0.49
SMG8-202ENST00000543872 KLHL1Q9NR64 748 aa11.97□□□□□ -0.49
SMG8-202ENST00000543872 RASD1Q9Y272 281 aa11.97□□□□□ -0.49
SMG8-202ENST00000543872 ALPK3Q96L96 1907 aa11.97□□□□□ -0.49
SMG8-202ENST00000543872 KRBOX1C9JBD0 128 aa11.97□□□□□ -0.49
SMG8-202ENST00000543872 PRR23D1E9PI22 279 aaPredicted RBP11.97□□□□□ -0.49
SMG8-202ENST00000543872 INPPL1O15357 1258 aa11.97□□□□□ -0.49
SMG8-202ENST00000543872 SIX6O95475 246 aa11.97□□□□□ -0.49
SMG8-202ENST00000543872 SNAI1O95863 264 aaPredicted RBP11.97□□□□□ -0.49
SMG8-202ENST00000543872 EPHX1P07099 455 aa11.97□□□□□ -0.49
SMG8-202ENST00000543872 LIMS3P0CW19 117 aa11.97□□□□□ -0.49
SMG8-202ENST00000543872 LIMS4P0CW20 117 aa11.97□□□□□ -0.49
SMG8-202ENST00000543872 PRR23D2P0DMB1 279 aaPredicted RBP11.97□□□□□ -0.49
SMG8-202ENST00000543872 FGF9P31371 208 aaPredicted RBP11.97□□□□□ -0.49
SMG8-202ENST00000543872 ACSL1P33121 698 aa11.97□□□□□ -0.49
SMG8-202ENST00000543872 MTNR1AP48039 350 aa11.97□□□□□ -0.49
SMG8-202ENST00000543872 CRYBB1P53674 252 aaPredicted RBP11.97□□□□□ -0.49
SMG8-202ENST00000543872 FGL2Q14314 439 aa11.97□□□□□ -0.49
SMG8-202ENST00000543872 LRRC70Q7Z2Q7 622 aa11.97□□□□□ -0.49
SMG8-202ENST00000543872 SLC7A13Q8TCU3 470 aa11.97□□□□□ -0.49
SMG8-202ENST00000543872 WFDC6Q9BQY6 131 aa11.97□□□□□ -0.49
SMG8-202ENST00000543872 WRAP53Q9BUR4 548 aaKnown RBP11.97□□□□□ -0.49
SMG8-202ENST00000543872 ZFYVE1Q9HBF4 777 aa11.97□□□□□ -0.49
SMG8-202ENST00000543872 ZSCAN32Q9NX65 697 aa11.97□□□□□ -0.49
SMG8-202ENST00000543872 TESQ9UGI8 421 aaKnown RBP11.97□□□□□ -0.49
SMG8-202ENST00000543872 POMT2Q9UKY4 750 aa11.97□□□□□ -0.49
SMG8-202ENST00000543872 SCML2Q9UQR0 700 aa11.97□□□□□ -0.49
SMG8-202ENST00000543872 FCF1Q9Y324 198 aaKnown RBP11.97□□□□□ -0.49
SMG8-202ENST00000543872 MID1O15344 667 aa11.96□□□□□ -0.49
SMG8-202ENST00000543872 TFP02787 698 aa11.96□□□□□ -0.49
SMG8-202ENST00000543872 BCHEP06276 602 aa11.96□□□□□ -0.49
SMG8-202ENST00000543872 JUPP14923 745 aa11.96□□□□□ -0.49
SMG8-202ENST00000543872 DGKGP49619 791 aa11.96□□□□□ -0.49
SMG8-202ENST00000543872 HOXA1P49639 335 aaPredicted RBP11.96□□□□□ -0.49
SMG8-202ENST00000543872 FLI1Q01543 452 aaPredicted RBP11.96□□□□□ -0.49
SMG8-202ENST00000543872 GSG1Q2KHT4 349 aa11.96□□□□□ -0.49
SMG8-202ENST00000543872 ALG1LQ6GMV1 187 aa11.96□□□□□ -0.49
SMG8-202ENST00000543872 TCTN3Q6NUS6 607 aa11.96□□□□□ -0.49
SMG8-202ENST00000543872 NR2C2APQ86WQ0 139 aa11.96□□□□□ -0.49
SMG8-202ENST00000543872 VRK3Q8IV63 474 aa11.96□□□□□ -0.49
SMG8-202ENST00000543872 L3MBTL4Q8NA19 623 aa11.96□□□□□ -0.49
SMG8-202ENST00000543872 HMGB4Q8WW32 186 aa11.96□□□□□ -0.49
SMG8-202ENST00000543872 HGDQ93099 445 aa11.96□□□□□ -0.49
SMG8-202ENST00000543872 WBP1Q96G27 269 aa11.96□□□□□ -0.49
SMG8-202ENST00000543872 PDGFDQ9GZP0 370 aaPredicted RBP11.96□□□□□ -0.49
SMG8-202ENST00000543872 RDH14Q9HBH5 336 aa11.96□□□□□ -0.49
SMG8-202ENST00000543872 KIF25Q9UIL4 384 aa11.96□□□□□ -0.49
SMG8-202ENST00000543872 PDE4DIPQ5VU43 2346 aa11.96□□□□□ -0.49
SMG8-202ENST00000543872 ANKDD1BA6NHY2 528 aa11.96□□□□□ -0.49
SMG8-202ENST00000543872 FAM74A7A6NL05 159 aa11.96□□□□□ -0.49
SMG8-202ENST00000543872 H7C0S8 307 aa11.96□□□□□ -0.49
SMG8-202ENST00000543872 RECKO95980 971 aa11.96□□□□□ -0.49
SMG8-202ENST00000543872 URODP06132 367 aa11.96□□□□□ -0.49
SMG8-202ENST00000543872 SRPRAP08240 638 aaKnown RBP11.96□□□□□ -0.49
SMG8-202ENST00000543872 SULT1A3P0DMM9 295 aa11.96□□□□□ -0.49
SMG8-202ENST00000543872 SULT1A4P0DMN0 295 aa11.96□□□□□ -0.49
SMG8-202ENST00000543872 SHC1P29353 583 aa11.96□□□□□ -0.49
SMG8-202ENST00000543872 CCR7P32248 378 aa11.96□□□□□ -0.49
SMG8-202ENST00000543872 MMP12P39900 470 aa11.96□□□□□ -0.49
SMG8-202ENST00000543872 OR10A3P58181 314 aa11.96□□□□□ -0.49
SMG8-202ENST00000543872 ZP1P60852 638 aa11.96□□□□□ -0.49
SMG8-202ENST00000543872 DSG2Q14126 1118 aa11.96□□□□□ -0.49
SMG8-202ENST00000543872 FAM74A3Q4VXF1 159 aa11.96□□□□□ -0.49
SMG8-202ENST00000543872 RNF219Q5W0B1 726 aaPredicted RBP11.96□□□□□ -0.49
SMG8-202ENST00000543872 FAM198BQ6UWH4 519 aa11.96□□□□□ -0.49
SMG8-202ENST00000543872 FAM26EQ8N5C1 309 aa11.96□□□□□ -0.49
SMG8-202ENST00000543872 RPLP0P6Q8NHW5 317 aa11.96□□□□□ -0.49
SMG8-202ENST00000543872 EGLN3Q9H6Z9 239 aa11.96□□□□□ -0.49
SMG8-202ENST00000543872 ASB4Q9Y574 426 aa11.96□□□□□ -0.49
SMG8-202ENST00000543872 E7EQ34 232 aa11.96□□□□□ -0.5
SMG8-202ENST00000543872 SEMA7AO75326 666 aa11.96□□□□□ -0.5
SMG8-202ENST00000543872 APOC1P02654 83 aa11.96□□□□□ -0.5
SMG8-202ENST00000543872 NMBP08949 121 aa11.96□□□□□ -0.5
SMG8-202ENST00000543872 HSD3B1P14060 373 aa11.96□□□□□ -0.5
SMG8-202ENST00000543872 PRPH2P23942 346 aa11.96□□□□□ -0.5
SMG8-202ENST00000543872 BMP8BP34820 402 aa11.96□□□□□ -0.5
SMG8-202ENST00000543872 CSNK1DP48730 415 aa11.96□□□□□ -0.5
SMG8-202ENST00000543872 RHOAP61586 193 aa11.96□□□□□ -0.5
SMG8-202ENST00000543872 DGCR2P98153 550 aa11.96□□□□□ -0.5
SMG8-202ENST00000543872 MLLT1Q03111 559 aaPredicted RBP11.96□□□□□ -0.5
SMG8-202ENST00000543872 NHLRC3Q5JS37 347 aa11.96□□□□□ -0.5
SMG8-202ENST00000543872 RGS7BPQ6MZT1 257 aaPredicted RBP11.96□□□□□ -0.5
SMG8-202ENST00000543872 ESPNLQ6ZVH7 1005 aa11.96□□□□□ -0.5
SMG8-202ENST00000543872 SZRD1Q7Z422 152 aa11.96□□□□□ -0.5
SMG8-202ENST00000543872 BMP8AQ7Z5Y6 402 aa11.96□□□□□ -0.5
SMG8-202ENST00000543872 FUBP3Q96I24 572 aaKnown RBP eCLIP11.96□□□□□ -0.52e-10■■■■■ 65.8
SMG8-202ENST00000543872 TBX5Q99593 518 aa11.96□□□□□ -0.5
SMG8-202ENST00000543872 ARHGAP9Q9BRR9 750 aa11.96□□□□□ -0.5
SMG8-202ENST00000543872 ESRP2Q9H6T0 727 aaKnown RBP11.96□□□□□ -0.5
SMG8-202ENST00000543872 FBXW2Q9UKT8 454 aa11.96□□□□□ -0.5
SMG8-202ENST00000543872 LIPT1Q9Y234 373 aa11.96□□□□□ -0.5
SMG8-202ENST00000543872 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms