RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 GSTM3P21266 225 aa15.22■□□□□ 0.03
VARS2-212ENST00000542001 MAOBP27338 520 aa15.22■□□□□ 0.03
VARS2-212ENST00000542001 CD300CQ08708 224 aa15.22■□□□□ 0.03
VARS2-212ENST00000542001 CCSAPQ6IQ19 270 aaPredicted RBP15.22■□□□□ 0.03
VARS2-212ENST00000542001 PNCKQ6P2M8 343 aa15.22■□□□□ 0.03
VARS2-212ENST00000542001 MEIOBQ8N635 442 aa15.22■□□□□ 0.03
VARS2-212ENST00000542001 ADAMTS16Q8TE57 1224 aa15.22■□□□□ 0.03
VARS2-212ENST00000542001 SETD7Q8WTS6 366 aaKnown RBP15.22■□□□□ 0.03
VARS2-212ENST00000542001 SRA1Q9HD15 236 aaKnown RBP15.22■□□□□ 0.03
VARS2-212ENST00000542001 TAS2R7Q9NYW3 318 aa15.22■□□□□ 0.03
VARS2-212ENST00000542001 CCDC88CQ9P219 2028 aa15.22■□□□□ 0.03
VARS2-212ENST00000542001 LOC100509620A0A075B734 347 aa15.22■□□□□ 0.03
VARS2-212ENST00000542001 C11orf98E9PRG8 122 aa15.22■□□□□ 0.03
VARS2-212ENST00000542001 ARHGAP33O14559 1287 aa15.22■□□□□ 0.03
VARS2-212ENST00000542001 EMC8O43402 210 aa15.22■□□□□ 0.03
VARS2-212ENST00000542001 SDC3O75056 442 aa15.22■□□□□ 0.03
VARS2-212ENST00000542001 EDNRAP25101 427 aa15.22■□□□□ 0.03
VARS2-212ENST00000542001 GUCA1AP43080 201 aaPredicted RBP15.22■□□□□ 0.03
VARS2-212ENST00000542001 AP2S1P53680 142 aaPredicted RBP15.22■□□□□ 0.03
VARS2-212ENST00000542001 CRYZQ08257 329 aaKnown RBP15.22■□□□□ 0.03
VARS2-212ENST00000542001 SFTPA1Q8IWL2 248 aa15.22■□□□□ 0.03
VARS2-212ENST00000542001 ZNF354BQ96LW1 612 aa15.22■□□□□ 0.03
VARS2-212ENST00000542001 NECTIN4Q96NY8 510 aa15.22■□□□□ 0.03
VARS2-212ENST00000542001 NTNG1Q9Y2I2 539 aa15.22■□□□□ 0.03
VARS2-212ENST00000542001 PRKNO60260 465 aaPredicted RBP15.21■□□□□ 0.03
VARS2-212ENST00000542001 RAD1O60671 282 aa15.21■□□□□ 0.03
VARS2-212ENST00000542001 ITGB7P26010 798 aa15.21■□□□□ 0.03
VARS2-212ENST00000542001 HOXC8P31273 242 aa15.21■□□□□ 0.03
VARS2-212ENST00000542001 RPS21P63220 83 aaKnown RBP15.21■□□□□ 0.03
VARS2-212ENST00000542001 BCL7AQ4VC05 210 aa15.21■□□□□ 0.03
VARS2-212ENST00000542001 PDZD3Q86UT5 571 aa15.21■□□□□ 0.03
VARS2-212ENST00000542001 PTOV1Q86YD1 416 aa15.21■□□□□ 0.03
VARS2-212ENST00000542001 CAMKVQ8NCB2 501 aa15.21■□□□□ 0.03
VARS2-212ENST00000542001 ANKK1Q8NFD2 765 aa15.21■□□□□ 0.03
VARS2-212ENST00000542001 MMABQ96EY8 250 aaPredicted RBP15.21■□□□□ 0.03
VARS2-212ENST00000542001 KCNN2Q9H2S1 579 aa15.21■□□□□ 0.03
VARS2-212ENST00000542001 MBNL1Q9NR56 388 aaKnown RBP15.21■□□□□ 0.03
VARS2-212ENST00000542001 TBCCD1Q9NVR7 557 aa15.21■□□□□ 0.03
VARS2-212ENST00000542001 MAU2Q9Y6X3 613 aa15.21■□□□□ 0.03
VARS2-212ENST00000542001 PLPP1O14494 284 aa15.21■□□□□ 0.03
VARS2-212ENST00000542001 EEF1E1O43324 174 aaKnown RBP15.21■□□□□ 0.03
VARS2-212ENST00000542001 UGDHO60701 494 aa15.21■□□□□ 0.03
VARS2-212ENST00000542001 SLCO2B1O94956 709 aa15.21■□□□□ 0.03
VARS2-212ENST00000542001 ADAP00813 363 aa15.21■□□□□ 0.03
VARS2-212ENST00000542001 ITGB8P26012 769 aa15.21■□□□□ 0.03
VARS2-212ENST00000542001 AKT2P31751 481 aa15.21■□□□□ 0.03
VARS2-212ENST00000542001 TNFSF8P32971 234 aa15.21■□□□□ 0.03
VARS2-212ENST00000542001 EIF1AXP47813 144 aaKnown RBP15.21■□□□□ 0.03
VARS2-212ENST00000542001 HDDC2Q7Z4H3 204 aa15.21■□□□□ 0.03
VARS2-212ENST00000542001 LSRQ86X29 649 aaPredicted RBP15.21■□□□□ 0.03
VARS2-212ENST00000542001 NRROSQ86YC3 692 aa15.21■□□□□ 0.03
VARS2-212ENST00000542001 PARP16Q8N5Y8 322 aa15.21■□□□□ 0.03
VARS2-212ENST00000542001 C1orf216Q8TAB5 229 aa15.21■□□□□ 0.03
VARS2-212ENST00000542001 PEX11GQ96HA9 241 aa15.21■□□□□ 0.03
VARS2-212ENST00000542001 ZBP1Q9H171 429 aa15.21■□□□□ 0.03
VARS2-212ENST00000542001 ENAMQ9NRM1 1142 aa15.21■□□□□ 0.03
VARS2-212ENST00000542001 YARS2Q9Y2Z4 477 aaKnown RBP15.21■□□□□ 0.03
VARS2-212ENST00000542001 PCDHGA6Q9Y5G7 932 aa15.21■□□□□ 0.03
VARS2-212ENST00000542001 ELOA3DA6NLF2 546 aaPredicted RBP15.21■□□□□ 0.02
VARS2-212ENST00000542001 C12orf71A8MTZ7 269 aa15.21■□□□□ 0.02
VARS2-212ENST00000542001 H3BQ06 376 aaPredicted RBP15.21■□□□□ 0.02
VARS2-212ENST00000542001 GRK6P43250 576 aa15.21■□□□□ 0.02
VARS2-212ENST00000542001 ENPP2Q13822 863 aa15.21■□□□□ 0.02
VARS2-212ENST00000542001 DSG2Q14126 1118 aa15.21■□□□□ 0.02
VARS2-212ENST00000542001 IRF4Q15306 451 aa15.21■□□□□ 0.02
VARS2-212ENST00000542001 ELOA3BQ3SY89 546 aa15.21■□□□□ 0.02
VARS2-212ENST00000542001 CEACAM19Q7Z692 300 aa15.21■□□□□ 0.02
VARS2-212ENST00000542001 SLC37A3Q8NCC5 494 aa15.21■□□□□ 0.02
VARS2-212ENST00000542001 ELOA3Q8NG57 546 aa15.21■□□□□ 0.02
VARS2-212ENST00000542001 OR6T1Q8NGN1 323 aa15.21■□□□□ 0.02
VARS2-212ENST00000542001 OR2L2Q8NH16 312 aa15.21■□□□□ 0.02
VARS2-212ENST00000542001 FANK1Q8TC84 345 aa15.21■□□□□ 0.02
VARS2-212ENST00000542001 CDS1Q92903 461 aa15.21■□□□□ 0.02
VARS2-212ENST00000542001 FRMD6Q96NE9 622 aa15.21■□□□□ 0.02
VARS2-212ENST00000542001 EPYCQ99645 322 aa15.21■□□□□ 0.02
VARS2-212ENST00000542001 TMEM246Q9BRR3 403 aa15.21■□□□□ 0.02
VARS2-212ENST00000542001 RAB11FIP5Q9BXF6 653 aa15.21■□□□□ 0.02
VARS2-212ENST00000542001 MARK1Q9P0L2 795 aa15.21■□□□□ 0.02
VARS2-212ENST00000542001 ATXN7L1Q9ULK2 861 aaPredicted RBP15.21■□□□□ 0.02
VARS2-212ENST00000542001 H0Y8X5 98 aa15.2■□□□□ 0.02
VARS2-212ENST00000542001 PCSK2P16519 638 aa15.2■□□□□ 0.02
VARS2-212ENST00000542001 GIPRP48546 466 aa15.2■□□□□ 0.02
VARS2-212ENST00000542001 ZNF45Q02386 682 aa15.2■□□□□ 0.02
VARS2-212ENST00000542001 TUBA3EQ6PEY2 450 aa15.2■□□□□ 0.02
VARS2-212ENST00000542001 CELF2-AS1Q8N7Q2 184 aa15.2■□□□□ 0.02
VARS2-212ENST00000542001 OR2T33Q8NG76 320 aa15.2■□□□□ 0.02
VARS2-212ENST00000542001 WDR20Q8TBZ3 569 aa15.2■□□□□ 0.02
VARS2-212ENST00000542001 C1QTNF3Q9BXJ4 246 aa15.2■□□□□ 0.02
VARS2-212ENST00000542001 SLC7A7Q9UM01 511 aa15.2■□□□□ 0.02
VARS2-212ENST00000542001 ING4Q9UNL4 249 aa15.2■□□□□ 0.02
VARS2-212ENST00000542001 ATG4BQ9Y4P1 393 aa15.2■□□□□ 0.02
VARS2-212ENST00000542001 AGAP5A6NIR3 686 aa15.2■□□□□ 0.02
VARS2-212ENST00000542001 ZNF701M0R085 212 aaPredicted RBP15.2■□□□□ 0.02
VARS2-212ENST00000542001 PRR35P0CG20 571 aa15.2■□□□□ 0.02
VARS2-212ENST00000542001 SLC35A2P78381 396 aa15.2■□□□□ 0.02
VARS2-212ENST00000542001 RHAGQ02094 409 aa15.2■□□□□ 0.02
VARS2-212ENST00000542001 HENMT1Q5T8I9 393 aaKnown RBP15.2■□□□□ 0.02
VARS2-212ENST00000542001 STEAP3Q658P3 488 aa15.2■□□□□ 0.02
VARS2-212ENST00000542001 KDM4DQ6B0I6 523 aa15.2■□□□□ 0.02
VARS2-212ENST00000542001 THEM6Q8WUY1 208 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms