RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 FRKP42685 505 aaPredicted RBP7.83□□□□□ -1.16
CHD4-208ENST00000540960 CRATP43155 626 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 GPR3P46089 330 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 ALDH9A1P49189 494 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 KHKP50053 298 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 PLA2G16P53816 162 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 RAD23AP54725 363 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 MAZP56270 477 aaKnown RBP7.83□□□□□ -1.16
CHD4-208ENST00000540960 SMIM11AP58511 58 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 RAB15P59190 212 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 MEF2AQ02078 507 aaPredicted RBP7.83□□□□□ -1.16
CHD4-208ENST00000540960 FOLH1Q04609 750 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 Q0VFX4 171 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 RAPSNQ13702 412 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 TCTE1Q5JU00 501 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 NDUFAF5Q5TEU4 345 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 GARNL3Q5VVW2 1013 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 OR52E8Q6IFG1 317 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 ANGPTL8Q6UXH0 198 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 FAM92BQ6ZTR7 304 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 CCDC80Q76M96 950 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 EIF3MQ7L2H7 374 aaKnown RBP7.83□□□□□ -1.16
CHD4-208ENST00000540960 PIWIL3Q7Z3Z3 882 aaKnown RBP7.83□□□□□ -1.16
CHD4-208ENST00000540960 BIVMQ86UB2 503 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 ANKRD46Q86W74 232 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 MSRB3Q8IXL7 192 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 MARVELD2Q8N4S9 558 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 ESX1Q8N693 406 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 ACOT4Q8N9L9 421 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 CHDHQ8NE62 594 aaPredicted RBP7.83□□□□□ -1.16
CHD4-208ENST00000540960 OR10G6Q8NH81 332 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 SLC37A2Q8TED4 501 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 LRTOMTQ8WZ04 291 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 NR4A3Q92570 626 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 PMM1Q92871 262 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 SLCO4A1Q96BD0 722 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 TM4SF19Q96DZ7 209 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 ZNF597Q96LX8 424 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 TEFMQ96QE5 360 aaKnown RBP7.83□□□□□ -1.16
CHD4-208ENST00000540960 OR2A14Q96R47 310 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 ZNF607Q96SK3 696 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 SLC38A3Q99624 504 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 FOXC2Q99958 501 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 RBM4BQ9BQ04 359 aaKnown RBP7.83□□□□□ -1.16
CHD4-208ENST00000540960 C17orf62Q9BQA9 187 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 RBM4Q9BWF3 364 aaKnown RBP7.83□□□□□ -1.16
CHD4-208ENST00000540960 YTHDF1Q9BYJ9 559 aaKnown RBP7.83□□□□□ -1.16
CHD4-208ENST00000540960 RPF2Q9H7B2 306 aaKnown RBP7.83□□□□□ -1.16
CHD4-208ENST00000540960 EVA1AQ9H8M9 152 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 SLC6A20Q9NP91 592 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 IL1RAPQ9NPH3 570 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 C1GALT1Q9NS00 363 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 NDUFA13Q9P0J0 144 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 SCHIP1Q9P0W5 487 aaPredicted RBP7.83□□□□□ -1.16
CHD4-208ENST00000540960 SH2B3Q9UQQ2 575 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 LIPT1Q9Y234 373 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 MRPS33Q9Y291 106 aaKnown RBP7.83□□□□□ -1.16
CHD4-208ENST00000540960 FAM32AQ9Y421 112 aaKnown RBP7.83□□□□□ -1.16
CHD4-208ENST00000540960 PCDHGB7Q9Y5F8 929 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 PCDHGB3Q9Y5G1 929 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 PKD1L1Q8TDX9 2849 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 IGKV1-8A0A0C4DH67 115 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 A0A1B0GUH1 482 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 FEZF1A0PJY2 475 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 TTC36A6NLP5 189 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 G3V2T6 193 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 SAP18O00422 153 aaKnown RBP7.82□□□□□ -1.16
CHD4-208ENST00000540960 BTN3A3O00478 584 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 HAT1O14929 419 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 ADAMDEC1O15204 470 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 KCNAB3O43448 404 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 ASNA1O43681 348 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 LCMT2O60294 686 aaKnown RBP7.82□□□□□ -1.16
CHD4-208ENST00000540960 E2F6O75461 281 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 TIPRLO75663 272 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 UBXN7O94888 489 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 PRSS23O95084 383 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 TNFAIP8O95379 198 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 C6orf47O95873 294 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 SERPINA1P01009 418 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 CST1P01037 141 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 TGP01266 2768 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 GSNP06396 782 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 FHP07954 510 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 RPSAP08865 295 aaKnown RBP7.82□□□□□ -1.16
CHD4-208ENST00000540960 NR2F6P10588 404 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 NCK1P16333 377 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 ALOX12P18054 663 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 POLR2CP19387 275 aaPredicted RBP7.82□□□□□ -1.16
CHD4-208ENST00000540960 PSMB5P28074 263 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 PCSK6P29122 969 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 IFNA8P32881 189 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 SOAT1P35610 550 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 GZMMP51124 257 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 SH3BGRP55822 239 aaPredicted RBP7.82□□□□□ -1.16
CHD4-208ENST00000540960 DSTNP60981 165 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 RPS18P62269 152 aaKnown RBP7.82□□□□□ -1.16
CHD4-208ENST00000540960 HBA1P69905 142 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 CDK6Q00534 326 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 PLIN5Q00G26 463 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms