RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 OMA1Q96E52 524 aa8.49□□□□□ -1.05
SNHG1-215ENST00000540904 HSPBAP1Q96EW2 488 aa8.49□□□□□ -1.05
SNHG1-215ENST00000540904 JSRP1Q96MG2 331 aaPredicted RBP8.49□□□□□ -1.05
SNHG1-215ENST00000540904 VSTM2LQ96N03 204 aa8.49□□□□□ -1.05
SNHG1-215ENST00000540904 BTBD9Q96Q07 612 aa8.49□□□□□ -1.05
SNHG1-215ENST00000540904 PRPF18Q99633 342 aaKnown RBP8.49□□□□□ -1.05
SNHG1-215ENST00000540904 TTTY12Q9BZ98 90 aa8.49□□□□□ -1.05
SNHG1-215ENST00000540904 MEAF6Q9HAF1 191 aa8.49□□□□□ -1.05
SNHG1-215ENST00000540904 FOLH1BQ9HBA9 442 aa8.49□□□□□ -1.05
SNHG1-215ENST00000540904 EQTNQ9NQ60 294 aa8.49□□□□□ -1.05
SNHG1-215ENST00000540904 RYDENQ9NUL5 291 aaKnown RBP8.49□□□□□ -1.05
SNHG1-215ENST00000540904 CNIH4Q9P003 139 aa8.49□□□□□ -1.05
SNHG1-215ENST00000540904 ATP6V1HQ9UI12 483 aa8.49□□□□□ -1.05
SNHG1-215ENST00000540904 C19orf53Q9UNZ5 99 aaPredicted RBP8.49□□□□□ -1.05
SNHG1-215ENST00000540904 GPR55Q9Y2T6 319 aaPredicted RBP8.49□□□□□ -1.05
SNHG1-215ENST00000540904 OR10H1Q9Y4A9 318 aa8.49□□□□□ -1.05
SNHG1-215ENST00000540904 SHANK1Q9Y566 2161 aa8.49□□□□□ -1.05
SNHG1-215ENST00000540904 GCN1Q92616 2671 aaKnown RBP8.48□□□□□ -1.05
SNHG1-215ENST00000540904 HDAC3O15379 428 aa8.48□□□□□ -1.05
SNHG1-215ENST00000540904 ZNHIT1O43257 154 aa8.48□□□□□ -1.05
SNHG1-215ENST00000540904 REM1O75628 298 aa8.48□□□□□ -1.05
SNHG1-215ENST00000540904 PPM1BO75688 479 aa8.48□□□□□ -1.05
SNHG1-215ENST00000540904 ABCB1P08183 1280 aaPredicted RBP8.48□□□□□ -1.05
SNHG1-215ENST00000540904 CT45A8P0DMV1 189 aa8.48□□□□□ -1.05
SNHG1-215ENST00000540904 CT45A9P0DMV2 189 aa8.48□□□□□ -1.05
SNHG1-215ENST00000540904 LBPP18428 481 aa8.48□□□□□ -1.05
SNHG1-215ENST00000540904 KRT20P35900 424 aa8.48□□□□□ -1.05
SNHG1-215ENST00000540904 FRKP42685 505 aaPredicted RBP8.48□□□□□ -1.05
SNHG1-215ENST00000540904 CDK9P50750 372 aaKnown RBP8.48□□□□□ -1.05
SNHG1-215ENST00000540904 PRKAG1P54619 331 aa8.48□□□□□ -1.05
SNHG1-215ENST00000540904 DIO3P55073 304 aa8.48□□□□□ -1.05
SNHG1-215ENST00000540904 HSF1Q00613 529 aa8.48□□□□□ -1.05
SNHG1-215ENST00000540904 OCRLQ01968 901 aa8.48□□□□□ -1.05
SNHG1-215ENST00000540904 RBPJQ06330 500 aa8.48□□□□□ -1.05
SNHG1-215ENST00000540904 FOXO1Q12778 655 aa8.48□□□□□ -1.05
SNHG1-215ENST00000540904 SMU1Q2TAY7 513 aa8.48□□□□□ -1.05
SNHG1-215ENST00000540904 CT45A2Q5DJT8 189 aa8.48□□□□□ -1.05
SNHG1-215ENST00000540904 CMPK2Q5EBM0 449 aa8.48□□□□□ -1.05
SNHG1-215ENST00000540904 C1QL3Q5VWW1 255 aa8.48□□□□□ -1.05
SNHG1-215ENST00000540904 BICRALQ6AI39 1079 aa8.48□□□□□ -1.05
SNHG1-215ENST00000540904 DESI1Q6ICB0 168 aa8.48□□□□□ -1.05
SNHG1-215ENST00000540904 NPSR1Q6W5P4 371 aa8.48□□□□□ -1.05
SNHG1-215ENST00000540904 WDR53Q7Z5U6 358 aaPredicted RBP8.48□□□□□ -1.05
SNHG1-215ENST00000540904 SLC22A16Q86VW1 577 aa8.48□□□□□ -1.05
SNHG1-215ENST00000540904 WDR75Q8IWA0 830 aaKnown RBP8.48□□□□□ -1.05
SNHG1-215ENST00000540904 GHDCQ8N2G8 530 aa8.48□□□□□ -1.05
SNHG1-215ENST00000540904 FBXW8Q8N3Y1 598 aa8.48□□□□□ -1.05
SNHG1-215ENST00000540904 OR52N2Q8NGI0 321 aa8.48□□□□□ -1.05
SNHG1-215ENST00000540904 SPPL2AQ8TCT8 520 aa8.48□□□□□ -1.05
SNHG1-215ENST00000540904 DYDC1Q8WWB3 177 aa8.48□□□□□ -1.05
SNHG1-215ENST00000540904 DOHHQ9BU89 302 aa8.48□□□□□ -1.05
SNHG1-215ENST00000540904 DEFB127Q9H1M4 99 aa8.48□□□□□ -1.05
SNHG1-215ENST00000540904 WDR55Q9H6Y2 383 aaPredicted RBP8.48□□□□□ -1.05
SNHG1-215ENST00000540904 IL1RL2Q9HB29 575 aa8.48□□□□□ -1.05
SNHG1-215ENST00000540904 PROK2Q9HC23 129 aa8.48□□□□□ -1.05
SNHG1-215ENST00000540904 ACSS1Q9NUB1 689 aaPredicted RBP8.48□□□□□ -1.05
SNHG1-215ENST00000540904 ATAD3AQ9NVI7 634 aa8.48□□□□□ -1.05
SNHG1-215ENST00000540904 ASIC5Q9NY37 505 aa8.48□□□□□ -1.05
SNHG1-215ENST00000540904 TUBA8Q9NY65 449 aaPredicted RBP8.48□□□□□ -1.05
SNHG1-215ENST00000540904 SH3BGRL2Q9UJC5 107 aa8.48□□□□□ -1.05
SNHG1-215ENST00000540904 CNOT11Q9UKZ1 510 aaKnown RBP8.48□□□□□ -1.05
SNHG1-215ENST00000540904 BOKQ9UMX3 212 aaPredicted RBP8.48□□□□□ -1.05
SNHG1-215ENST00000540904 SLC5A6Q9Y289 635 aa8.48□□□□□ -1.05
SNHG1-215ENST00000540904 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.48□□□□□ -1.05
SNHG1-215ENST00000540904 TRGV8A0A0C4DH27 118 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 GOLGA8QA0A0J9YX86 632 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 A0A1W2PRB8 838 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 CLEC18AA5D8T8 446 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 GOLGA8OA6NCC3 632 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 TRPC5OSA6NMA1 111 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 GOLGA8NF8WBI6 632 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 SLCO1B7G3V0H7 640 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 SDHDO14521 159 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 KLF11O14901 512 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 TO15178 435 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 LRRTM2O43300 516 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 SLC19A2O60779 497 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 UGT2B11O75310 529 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 GLSO94925 669 aaPredicted RBP8.47□□□□□ -1.05
SNHG1-215ENST00000540904 PSMG1O95456 288 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 STSP08842 583 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 NAGAP17050 411 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 EPHA3P29320 983 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 IL12BP29460 328 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 CASP3P42574 277 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 MAGEA5P43359 124 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 CLDN8P56748 225 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 PPP2R2AP63151 447 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 RPP38P78345 283 aaKnown RBP8.47□□□□□ -1.05
SNHG1-215ENST00000540904 PSG6Q00889 435 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 ZNHIT3Q15649 155 aaPredicted RBP8.47□□□□□ -1.05
SNHG1-215ENST00000540904 PGS1Q32NB8 556 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 TBCELQ5QJ74 424 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 TMEM198Q66K66 360 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 NXNQ6DKJ4 435 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 CLEC18BQ6UXF7 455 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 BNC2Q6ZN30 1099 aaPredicted RBP8.47□□□□□ -1.05
SNHG1-215ENST00000540904 RGS9BPQ6ZS82 235 aa8.47□□□□□ -1.05
SNHG1-215ENST00000540904 LARP4Q71RC2 724 aaKnown RBP eCLIP8.47□□□□□ -1.05
SNHG1-215ENST00000540904 NUP54Q7Z3B4 507 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms