RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 GLUD1P00367 558 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 HLA-DQB1P01920 261 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 SEMG1P04279 462 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 TPOP07202 933 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 OR56A5P0C7T3 313 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 CYP2A6P11509 494 aaPredicted RBP6.22□□□□□ -1.41
USP28-202ENST00000535607 ANXA3P12429 323 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 HLA-EP13747 358 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 CSF2RAP15509 400 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 HOXA5P20719 270 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 DGKAP23743 735 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 STOMP27105 288 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 HOXA9P31269 272 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 GSTM5P46439 218 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 IDH2P48735 452 aaKnown RBP6.22□□□□□ -1.41
USP28-202ENST00000535607 MAN2A2P49641 1150 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 NDUFV1P49821 464 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 LIMK1P53667 647 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 CLDN20P56880 219 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 SMIM11AP58511 58 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 LILRA4P59901 499 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 CTAG1AP78358 180 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 NKX6-1P78426 367 aaPredicted RBP6.22□□□□□ -1.41
USP28-202ENST00000535607 S100A12P80511 92 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 DSC1Q08554 894 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 MLLT11Q13015 90 aaPredicted RBP6.22□□□□□ -1.41
USP28-202ENST00000535607 SLAMF1Q13291 335 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 TP53BP2Q13625 1128 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 SPHARQ15513 63 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 GRK1Q15835 563 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 MICAQ29983 383 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 GLYR1Q49A26 553 aaPredicted RBP6.22□□□□□ -1.41
USP28-202ENST00000535607 RFTN2Q52LD8 501 aaPredicted RBP6.22□□□□□ -1.41
USP28-202ENST00000535607 IFI44LQ53G44 452 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 KLHL22Q53GT1 634 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 CARD16Q5EG05 197 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 NOMO2Q5JPE7 1267 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 SPANXN4Q5MJ08 99 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 ANXA8L1Q5VT79 327 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 TYW3Q6IPR3 259 aaKnown RBP6.22□□□□□ -1.41
USP28-202ENST00000535607 SCIMPQ6UWF3 145 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 TEX261Q6UWH6 196 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 MED25Q71SY5 747 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 GET4Q7L5D6 327 aaPredicted RBP6.22□□□□□ -1.41
USP28-202ENST00000535607 TAC4Q86UU9 113 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 ADGRG3Q86Y34 549 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 OR8H3Q8N146 312 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 SLC37A3Q8NCC5 494 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 B3GNT7Q8NFL0 401 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 UTP15Q8TED0 518 aaKnown RBP6.22□□□□□ -1.41
USP28-202ENST00000535607 UBTD2Q8WUN7 234 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 APH1BQ8WW43 257 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 OTULINQ96BN8 352 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 CMTM7Q96FZ5 175 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 CDKN2AIPNLQ96HQ2 116 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 METTL2AQ96IZ6 378 aaKnown RBP6.22□□□□□ -1.41
USP28-202ENST00000535607 MSLNLQ96KJ4 702 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 GPR137Q96N19 417 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 ERMAPQ96PL5 475 aaPredicted RBP6.22□□□□□ -1.41
USP28-202ENST00000535607 NEDD4LQ96PU5 975 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 FYTTD1Q96QD9 318 aaKnown RBP6.22□□□□□ -1.41
USP28-202ENST00000535607 MCCC1Q96RQ3 725 aaPredicted RBP6.22□□□□□ -1.41
USP28-202ENST00000535607 DMRTA2Q96SC8 542 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 ADOQ96SZ5 270 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 SDHCQ99643 169 aaPredicted RBP6.22□□□□□ -1.41
USP28-202ENST00000535607 GPR21Q99679 349 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 MARVELD1Q9BSK0 173 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 TTPALQ9BTX7 342 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 DOHHQ9BU89 302 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 NTMT1Q9BV86 223 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 C1QTNF7Q9BXJ2 289 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 ADGRE3Q9BY15 652 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 MMP28Q9H239 520 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 NARFLQ9H6Q4 476 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 LTB4R2Q9NPC1 389 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 TIGARQ9NQ88 270 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 TLR8Q9NR97 1041 aaKnown RBP6.22□□□□□ -1.41
USP28-202ENST00000535607 SNTG1Q9NSN8 517 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 RLIMQ9NVW2 624 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 MS4A12Q9NXJ0 267 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 GPR83Q9NYM4 423 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 ZNF224Q9NZL3 707 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 MAT2BQ9NZL9 334 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 JKAMPQ9P055 326 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 EMC3Q9P0I2 261 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 MARCH4Q9P2E8 410 aaPredicted RBP6.22□□□□□ -1.41
USP28-202ENST00000535607 ZMAT5Q9UDW3 170 aaKnown RBP6.22□□□□□ -1.41
USP28-202ENST00000535607 KIF25Q9UIL4 384 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 ACSL5Q9ULC5 683 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 ABCG2Q9UNQ0 655 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 NCKAP1Q9Y2A7 1128 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 MAB21L2Q9Y586 359 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 ALG5Q9Y673 324 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 U3KQ87 197 aa6.22□□□□□ -1.41
USP28-202ENST00000535607 TDRD15B5MCY1 1934 aaKnown RBP6.22□□□□□ -1.41
USP28-202ENST00000535607 SCN1AP35498 2009 aa6.21□□□□□ -1.41
USP28-202ENST00000535607 A0A0G2JMP0 313 aa6.21□□□□□ -1.42
USP28-202ENST00000535607 A0A1W2PQL4 384 aaPredicted RBP6.21□□□□□ -1.42
USP28-202ENST00000535607 CDHR4A6H8M9 788 aa6.21□□□□□ -1.42
USP28-202ENST00000535607 WASHC1A8K0Z3 465 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms