RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 RDH16O75452 317 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 THBS1P07996 1170 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 GUSBP08236 651 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 ALOX5P09917 674 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 GLB1P16278 677 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 ELAVL4P26378 380 aaKnown RBP12.53□□□□□ -0.4
BEST1-208ENST00000534553 GABRA4P48169 554 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 PPM1FP49593 454 aaPredicted RBP12.53□□□□□ -0.4
BEST1-208ENST00000534553 UGT2B15P54855 530 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 SNRPNP63162 240 aaKnown RBP12.53□□□□□ -0.4
BEST1-208ENST00000534553 COX10Q12887 443 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 GRM7Q14831 915 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 NR1D2Q14995 579 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 FGD3Q5JSP0 725 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 MLIPQ5VWP3 458 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 P3H2Q8IVL5 708 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 OR4N5Q8IXE1 308 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 AQP11Q8NBQ7 271 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 OR9A4Q8NGU2 314 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 VANGL1Q8TAA9 524 aaPredicted RBP12.53□□□□□ -0.4
BEST1-208ENST00000534553 SLC9A6Q92581 669 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 MVB12AQ96EY5 273 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 SLC35A4Q96G79 324 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 DGCR6LQ9BY27 220 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 MAT2BQ9NZL9 334 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 LRIT1Q9P2V4 623 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 SUSD2Q9UGT4 822 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 A4GNTQ9UNA3 340 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 WDR45Q9Y484 360 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 PCDHGA6Q9Y5G7 932 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 TMEM131Q92545 1883 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 TTC36A6NLP5 189 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 OR10H2O60403 315 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 CTNSO60931 367 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 LDB3O75112 727 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 DCNP07585 359 aaKnown RBP12.53□□□□□ -0.4
BEST1-208ENST00000534553 PAX7P23759 505 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 IFNGR2P38484 337 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 CDC42P60953 191 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 MVKQ03426 396 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 CHRNEQ04844 493 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 MAP4K2Q12851 820 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 DEFB110Q30KQ9 67 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 AP1ARQ63HQ0 302 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 KMT5CQ86Y97 462 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 SVOPQ8N4V2 548 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 SLC16A11Q8NCK7 471 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 BPIFB6Q8NFQ5 453 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 OR9Q2Q8NGE9 314 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 OR5T3Q8NGG3 340 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 TGM7Q96PF1 710 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 ARHGDIGQ99819 225 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 NIPSNAP1Q9BPW8 284 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 ZNF350Q9GZX5 532 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 DUSP21Q9H596 190 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 ARMC7Q9H6L4 198 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 CXorf21Q9HAI6 301 aa12.53□□□□□ -0.4
BEST1-208ENST00000534553 GOLGA4Q13439 2230 aaKnown RBP12.52□□□□□ -0.4
BEST1-208ENST00000534553 ZNF749O43361 778 aa12.52□□□□□ -0.41
BEST1-208ENST00000534553 OR10H3O60404 316 aa12.52□□□□□ -0.41
BEST1-208ENST00000534553 NOL3O60936 208 aaKnown RBP12.52□□□□□ -0.41
BEST1-208ENST00000534553 MSL3P1P0C860 447 aa12.52□□□□□ -0.41
BEST1-208ENST00000534553 ITIH1P19827 911 aa12.52□□□□□ -0.41
BEST1-208ENST00000534553 GALNSP34059 522 aa12.52□□□□□ -0.41
BEST1-208ENST00000534553 PTGER1P34995 402 aa12.52□□□□□ -0.41
BEST1-208ENST00000534553 CTSKP43235 329 aa12.52□□□□□ -0.41
BEST1-208ENST00000534553 HSD17B7P56937 341 aa12.52□□□□□ -0.41
BEST1-208ENST00000534553 IGLV3-21P80748 117 aaPredicted RBP12.52□□□□□ -0.41
BEST1-208ENST00000534553 STX4Q12846 297 aa12.52□□□□□ -0.41
BEST1-208ENST00000534553 DUSP8Q13202 625 aa12.52□□□□□ -0.41
BEST1-208ENST00000534553 ZNHIT3Q15649 155 aaPredicted RBP12.52□□□□□ -0.41
BEST1-208ENST00000534553 LYSMD4Q5XG99 296 aa12.52□□□□□ -0.41
BEST1-208ENST00000534553 LAIR2Q6ISS4 152 aa12.52□□□□□ -0.41
BEST1-208ENST00000534553 CD300LDQ6UXZ3 194 aa12.52□□□□□ -0.41
BEST1-208ENST00000534553 FRRS1Q6ZNA5 592 aa12.52□□□□□ -0.41
BEST1-208ENST00000534553 B3GNT8Q7Z7M8 397 aa12.52□□□□□ -0.41
BEST1-208ENST00000534553 GALNT12Q8IXK2 581 aa12.52□□□□□ -0.41
BEST1-208ENST00000534553 SPARTQ8N0X7 666 aa12.52□□□□□ -0.41
BEST1-208ENST00000534553 VWA5B2Q8N398 1253 aa12.52□□□□□ -0.41
BEST1-208ENST00000534553 OR52P1PQ8NH57 321 aa12.52□□□□□ -0.41
BEST1-208ENST00000534553 CNIH3Q8TBE1 160 aa12.52□□□□□ -0.41
BEST1-208ENST00000534553 HOXB13Q92826 284 aaPredicted RBP12.52□□□□□ -0.41
BEST1-208ENST00000534553 CDS1Q92903 461 aa12.52□□□□□ -0.41
BEST1-208ENST00000534553 ANKRD9Q96BM1 317 aaPredicted RBP12.52□□□□□ -0.41
BEST1-208ENST00000534553 ELF4Q99607 663 aaPredicted RBP12.52□□□□□ -0.41
BEST1-208ENST00000534553 FUZQ9BT04 418 aa12.52□□□□□ -0.41
BEST1-208ENST00000534553 UCK2Q9BZX2 261 aa12.52□□□□□ -0.41
BEST1-208ENST00000534553 SAP130Q9H0E3 1048 aa12.52□□□□□ -0.41
BEST1-208ENST00000534553 STARD5Q9NSY2 213 aa12.52□□□□□ -0.41
BEST1-208ENST00000534553 PLCXD1Q9NUJ7 323 aa12.52□□□□□ -0.41
BEST1-208ENST00000534553 RLIMQ9NVW2 624 aa12.52□□□□□ -0.41
BEST1-208ENST00000534553 IMPAD1Q9NX62 359 aa12.52□□□□□ -0.41
BEST1-208ENST00000534553 KCNE3Q9Y6H6 103 aa12.52□□□□□ -0.41
BEST1-208ENST00000534553 RNF215Q9Y6U7 377 aa12.52□□□□□ -0.41
BEST1-208ENST00000534553 A0A0A6YYC8 382 aaPredicted RBP12.51□□□□□ -0.41
BEST1-208ENST00000534553 TRBV4-1A0A0J9YWV2 114 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 SH3PXD2BA1X283 911 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 H3BSA7 217 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 I3L1I5 382 aaPredicted RBP12.51□□□□□ -0.41
BEST1-208ENST00000534553 AP3D1O14617 1153 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms