RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 ANKRD46Q86W74 232 aa22.32■■□□□ 1.16
SIPA1-210ENST00000534406 ZNF227Q86WZ6 799 aa22.32■■□□□ 1.16
SIPA1-210ENST00000534406 TMEM178AQ8NBL3 297 aa22.32■■□□□ 1.16
SIPA1-210ENST00000534406 NUP43Q8NFH3 380 aa22.32■■□□□ 1.16
SIPA1-210ENST00000534406 OR56A1Q8NGH5 318 aa22.32■■□□□ 1.16
SIPA1-210ENST00000534406 OR4A15Q8NGL6 344 aa22.32■■□□□ 1.16
SIPA1-210ENST00000534406 MOAP1Q96BY2 351 aa22.32■■□□□ 1.16
SIPA1-210ENST00000534406 SCMH1Q96GD3 660 aa22.32■■□□□ 1.16
SIPA1-210ENST00000534406 OR52E6Q96RD3 313 aa22.32■■□□□ 1.16
SIPA1-210ENST00000534406 TIMMDC1Q9NPL8 285 aa22.32■■□□□ 1.16
SIPA1-210ENST00000534406 KLHL1Q9NR64 748 aa22.32■■□□□ 1.16
SIPA1-210ENST00000534406 PCDHGB4Q9UN71 923 aa22.32■■□□□ 1.16
SIPA1-210ENST00000534406 GPR55Q9Y2T6 319 aaPredicted RBP22.32■■□□□ 1.16
SIPA1-210ENST00000534406 FAM234BA2RU67 622 aa22.31■■□□□ 1.16
SIPA1-210ENST00000534406 SUV39H1O43463 412 aa22.31■■□□□ 1.16
SIPA1-210ENST00000534406 SCN2BO60939 215 aa22.31■■□□□ 1.16
SIPA1-210ENST00000534406 SP1P08047 785 aa22.31■■□□□ 1.16
SIPA1-210ENST00000534406 CT45A8P0DMV1 189 aa22.31■■□□□ 1.16
SIPA1-210ENST00000534406 CT45A9P0DMV2 189 aa22.31■■□□□ 1.16
SIPA1-210ENST00000534406 ABCD3P28288 659 aa22.31■■□□□ 1.16
SIPA1-210ENST00000534406 POLR2JP52435 117 aaKnown RBP22.31■■□□□ 1.16
SIPA1-210ENST00000534406 ARFIP2P53365 341 aa22.31■■□□□ 1.16
SIPA1-210ENST00000534406 GYS2P54840 703 aa22.31■■□□□ 1.16
SIPA1-210ENST00000534406 CORO7P57737 925 aa22.31■■□□□ 1.16
SIPA1-210ENST00000534406 PSPHP78330 225 aa22.31■■□□□ 1.16
SIPA1-210ENST00000534406 PLCXD2Q0VAA5 305 aa22.31■■□□□ 1.16
SIPA1-210ENST00000534406 MAPKAPK3Q16644 382 aa22.31■■□□□ 1.16
SIPA1-210ENST00000534406 ZNF791Q3KP31 576 aaPredicted RBP22.31■■□□□ 1.16
SIPA1-210ENST00000534406 CT45A2Q5DJT8 189 aa22.31■■□□□ 1.16
SIPA1-210ENST00000534406 NPSR1Q6W5P4 371 aa22.31■■□□□ 1.16
SIPA1-210ENST00000534406 GOLM1Q8NBJ4 401 aa22.31■■□□□ 1.16
SIPA1-210ENST00000534406 SGCZQ96LD1 299 aa22.31■■□□□ 1.16
SIPA1-210ENST00000534406 HES7Q9BYE0 225 aa22.31■■□□□ 1.16
SIPA1-210ENST00000534406 KLHL14Q9P2G3 628 aa22.31■■□□□ 1.16
SIPA1-210ENST00000534406 BTNL2Q9UIR0 455 aa22.31■■□□□ 1.16
SIPA1-210ENST00000534406 NPFFR2Q9Y5X5 522 aa22.31■■□□□ 1.16
SIPA1-210ENST00000534406 TTC36A6NLP5 189 aa22.3■■□□□ 1.16
SIPA1-210ENST00000534406 TO15178 435 aa22.3■■□□□ 1.16
SIPA1-210ENST00000534406 NME2P1O60361 137 aa22.3■■□□□ 1.16
SIPA1-210ENST00000534406 NCF2P19878 526 aaPredicted RBP22.3■■□□□ 1.16
SIPA1-210ENST00000534406 NME2P22392 152 aa22.3■■□□□ 1.16
SIPA1-210ENST00000534406 LSP1P33241 339 aa22.3■■□□□ 1.16
SIPA1-210ENST00000534406 CCT3P49368 545 aaKnown RBP22.3■■□□□ 1.16
SIPA1-210ENST00000534406 LRRC74AQ0VAA2 488 aa22.3■■□□□ 1.16
SIPA1-210ENST00000534406 C19orf57Q0VDD7 668 aa22.3■■□□□ 1.16
SIPA1-210ENST00000534406 SF3A3Q12874 501 aaKnown RBP eCLIP22.3■■□□□ 1.16
SIPA1-210ENST00000534406 TIGD2Q4W5G0 525 aa22.3■■□□□ 1.16
SIPA1-210ENST00000534406 SLC25A25Q6KCM7 469 aa22.3■■□□□ 1.16
SIPA1-210ENST00000534406 RPUSD3Q6P087 351 aaKnown RBP22.3■■□□□ 1.16
SIPA1-210ENST00000534406 MSANTD1Q6ZTZ1 278 aa22.3■■□□□ 1.16
SIPA1-210ENST00000534406 PRICKLE2Q7Z3G6 844 aa22.3■■□□□ 1.16
SIPA1-210ENST00000534406 SLC44A2Q8IWA5 706 aaPredicted RBP22.3■■□□□ 1.16
SIPA1-210ENST00000534406 PRR22Q8IZ63 422 aa22.3■■□□□ 1.16
SIPA1-210ENST00000534406 SLC34A3Q8N130 599 aa22.3■■□□□ 1.16
SIPA1-210ENST00000534406 PSD4Q8NDX1 1056 aa22.3■■□□□ 1.16
SIPA1-210ENST00000534406 FAM13CQ8NE31 585 aa22.3■■□□□ 1.16
SIPA1-210ENST00000534406 CCDC115Q96NT0 180 aa22.3■■□□□ 1.16
SIPA1-210ENST00000534406 LMF2Q9BU23 707 aaKnown RBP22.3■■□□□ 1.16
SIPA1-210ENST00000534406 KLF13Q9Y2Y9 288 aaPredicted RBP22.3■■□□□ 1.16
SIPA1-210ENST00000534406 OR10H1Q9Y4A9 318 aa22.3■■□□□ 1.16
SIPA1-210ENST00000534406 PRRC2CQ9Y520 2896 aaKnown RBP22.29■■□□□ 1.16
SIPA1-210ENST00000534406 GIMAP1-GIMAP5A0A087WTJ2 511 aa22.29■■□□□ 1.16
SIPA1-210ENST00000534406 TTLL8A6PVC2 850 aa22.29■■□□□ 1.16
SIPA1-210ENST00000534406 CPSF4O95639 269 aaKnown RBP22.29■■□□□ 1.16
SIPA1-210ENST00000534406 ZFP36L2P47974 494 aaKnown RBP22.29■■□□□ 1.16
SIPA1-210ENST00000534406 PRIM2P49643 509 aa22.29■■□□□ 1.16
SIPA1-210ENST00000534406 GNGT1P63211 74 aa22.29■■□□□ 1.16
SIPA1-210ENST00000534406 PSG6Q00889 435 aa22.29■■□□□ 1.16
SIPA1-210ENST00000534406 TP53BP2Q13625 1128 aa22.29■■□□□ 1.16
SIPA1-210ENST00000534406 NTRK2Q16620 822 aa22.29■■□□□ 1.16
SIPA1-210ENST00000534406 VPS26BQ4G0F5 336 aa22.29■■□□□ 1.16
SIPA1-210ENST00000534406 METTL21CQ5VZV1 264 aa22.29■■□□□ 1.16
SIPA1-210ENST00000534406 MFSD12Q6NUT3 480 aa22.29■■□□□ 1.16
SIPA1-210ENST00000534406 BHLHB9Q6PI77 547 aa22.29■■□□□ 1.16
SIPA1-210ENST00000534406 GALNTL5Q7Z4T8 443 aa22.29■■□□□ 1.16
SIPA1-210ENST00000534406 MDGA2Q7Z553 956 aa22.29■■□□□ 1.16
SIPA1-210ENST00000534406 WDR53Q7Z5U6 358 aaPredicted RBP22.29■■□□□ 1.16
SIPA1-210ENST00000534406 CDRT4Q8N9R6 151 aa22.29■■□□□ 1.16
SIPA1-210ENST00000534406 OMA1Q96E52 524 aa22.29■■□□□ 1.16
SIPA1-210ENST00000534406 GIMAP5Q96F15 307 aa22.29■■□□□ 1.16
SIPA1-210ENST00000534406 NSRP1Q9H0G5 558 aaKnown RBP22.29■■□□□ 1.16
SIPA1-210ENST00000534406 EPN3Q9H201 632 aa22.29■■□□□ 1.16
SIPA1-210ENST00000534406 RABEP2Q9H5N1 569 aa22.29■■□□□ 1.16
SIPA1-210ENST00000534406 Q9N2J8 555 aa22.29■■□□□ 1.16
SIPA1-210ENST00000534406 TMEM45AQ9NWC5 275 aa22.29■■□□□ 1.16
SIPA1-210ENST00000534406 RNF103-CHMP3A0A140T963 221 aa22.28■■□□□ 1.16
SIPA1-210ENST00000534406 KCNK10P57789 538 aa22.28■■□□□ 1.16
SIPA1-210ENST00000534406 RCAN2Q14206 197 aa22.28■■□□□ 1.16
SIPA1-210ENST00000534406 OR5AK3PQ8NH89 298 aa22.28■■□□□ 1.16
SIPA1-210ENST00000534406 HOXB13Q92826 284 aaPredicted RBP22.28■■□□□ 1.16
SIPA1-210ENST00000534406 TRIM4Q9C037 500 aa22.28■■□□□ 1.16
SIPA1-210ENST00000534406 ZNF385DQ9H6B1 395 aa22.28■■□□□ 1.16
SIPA1-210ENST00000534406 ZNF462Q96JM2 2506 aa22.28■■□□□ 1.16
SIPA1-210ENST00000534406 NR5A2O00482 541 aa22.27■■□□□ 1.16
SIPA1-210ENST00000534406 PPM1BO75688 479 aa22.27■■□□□ 1.16
SIPA1-210ENST00000534406 HMGN2P05204 90 aaKnown RBP22.27■■□□□ 1.16
SIPA1-210ENST00000534406 KRT16P08779 473 aa22.27■■□□□ 1.16
SIPA1-210ENST00000534406 NAGAP17050 411 aa22.27■■□□□ 1.16
SIPA1-210ENST00000534406 KRT20P35900 424 aa22.27■■□□□ 1.16
SIPA1-210ENST00000534406 FBXW4P57775 412 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms