RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 UBTD2Q8WUN7 234 aa16.34■□□□□ 0.21
PHRF1-206ENST00000534320 SH3YL1Q96HL8 342 aaPredicted RBP16.34■□□□□ 0.21
PHRF1-206ENST00000534320 FAIMQ9NVQ4 179 aa16.34■□□□□ 0.21
PHRF1-206ENST00000534320 ADAP00813 363 aa16.33■□□□□ 0.21
PHRF1-206ENST00000534320 RNF144AP50876 292 aaPredicted RBP16.33■□□□□ 0.21
PHRF1-206ENST00000534320 GXYLT1Q4G148 440 aa16.33■□□□□ 0.21
PHRF1-206ENST00000534320 GID4Q8IVV7 300 aa16.33■□□□□ 0.21
PHRF1-206ENST00000534320 OR51G2Q8NGK0 314 aa16.33■□□□□ 0.21
PHRF1-206ENST00000534320 OR5M3Q8NGP4 307 aa16.33■□□□□ 0.21
PHRF1-206ENST00000534320 ZFYVE21Q9BQ24 234 aa16.33■□□□□ 0.21
PHRF1-206ENST00000534320 TPSD1Q9BZJ3 242 aa16.33■□□□□ 0.21
PHRF1-206ENST00000534320 CA14Q9ULX7 337 aa16.33■□□□□ 0.21
PHRF1-206ENST00000534320 PAPPA2Q9BXP8 1791 aa16.33■□□□□ 0.21
PHRF1-206ENST00000534320 FAM221BA6H8Z2 402 aa16.33■□□□□ 0.21
PHRF1-206ENST00000534320 RPP14O95059 124 aaKnown RBP16.33■□□□□ 0.21
PHRF1-206ENST00000534320 STSP08842 583 aa16.33■□□□□ 0.21
PHRF1-206ENST00000534320 CKMT1AP12532 417 aa16.33■□□□□ 0.21
PHRF1-206ENST00000534320 CERS1P27544 350 aa16.33■□□□□ 0.21
PHRF1-206ENST00000534320 GSTM2P28161 218 aa16.33■□□□□ 0.21
PHRF1-206ENST00000534320 P2RY2P41231 377 aa16.33■□□□□ 0.21
PHRF1-206ENST00000534320 VAMP2P63027 116 aa16.33■□□□□ 0.21
PHRF1-206ENST00000534320 SHC2P98077 582 aa16.33■□□□□ 0.21
PHRF1-206ENST00000534320 RPS26P11Q5JNZ5 115 aaPredicted RBP16.33■□□□□ 0.21
PHRF1-206ENST00000534320 ZNF852Q6ZMS4 543 aa16.33■□□□□ 0.21
PHRF1-206ENST00000534320 PIAS4Q8N2W9 510 aaPredicted RBP16.33■□□□□ 0.21
PHRF1-206ENST00000534320 PITHD1Q9GZP4 211 aaPredicted RBP16.33■□□□□ 0.21
PHRF1-206ENST00000534320 ZNF670-ZNF695F2Z2N8 137 aa16.33■□□□□ 0.2
PHRF1-206ENST00000534320 ARL6IP5O75915 188 aa16.33■□□□□ 0.2
PHRF1-206ENST00000534320 SOX30O94993 753 aa16.33■□□□□ 0.2
PHRF1-206ENST00000534320 HTR2BP41595 481 aa16.33■□□□□ 0.2
PHRF1-206ENST00000534320 CLDN2P57739 230 aa16.33■□□□□ 0.2
PHRF1-206ENST00000534320 LHX8Q68G74 356 aa16.33■□□□□ 0.2
PHRF1-206ENST00000534320 TLDC1Q6P9B6 456 aa16.33■□□□□ 0.2
PHRF1-206ENST00000534320 OR52E1Q8NGJ3 308 aa16.33■□□□□ 0.2
PHRF1-206ENST00000534320 RPLP0P6Q8NHW5 317 aa16.33■□□□□ 0.2
PHRF1-206ENST00000534320 BCL7CQ8WUZ0 217 aaPredicted RBP16.33■□□□□ 0.2
PHRF1-206ENST00000534320 BARD1Q99728 777 aaKnown RBP16.33■□□□□ 0.2
PHRF1-206ENST00000534320 WACQ9BTA9 647 aa16.33■□□□□ 0.2
PHRF1-206ENST00000534320 CMAHPQ9Y471 501 aa16.33■□□□□ 0.2
PHRF1-206ENST00000534320 ANKRD12Q6UB98 2062 aa16.33■□□□□ 0.2
PHRF1-206ENST00000534320 UNC119BA6NIH7 251 aa16.33■□□□□ 0.2
PHRF1-206ENST00000534320 KLK3P07288 261 aaPredicted RBP16.33■□□□□ 0.2
PHRF1-206ENST00000534320 ANXA3P12429 323 aa16.33■□□□□ 0.2
PHRF1-206ENST00000534320 ACVR1Q04771 509 aa16.33■□□□□ 0.2
PHRF1-206ENST00000534320 CD47Q08722 323 aa16.33■□□□□ 0.2
PHRF1-206ENST00000534320 NNATQ16517 81 aa16.33■□□□□ 0.2
PHRF1-206ENST00000534320 UBQLNLQ8IYU4 475 aa16.33■□□□□ 0.2
PHRF1-206ENST00000534320 HCAR2Q8TDS4 363 aa16.33■□□□□ 0.2
PHRF1-206ENST00000534320 MAELQ96JY0 434 aaKnown RBP16.33■□□□□ 0.2
PHRF1-206ENST00000534320 PDFQ9HBH1 243 aa16.33■□□□□ 0.2
PHRF1-206ENST00000534320 HTR3EA5X5Y0 456 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 CACNG3O60359 315 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 Q6ZSR9 355 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 YIPF7Q8N8F6 280 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 TCTEX1D2Q8WW35 142 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 SDHAF3Q9NRP4 125 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 ABI3Q9P2A4 366 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 AHSA1O95433 338 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 PLATP00750 562 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 MT-ND5P03915 603 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 NUDT7P0C024 238 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 RGS19P49795 217 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 CTBP2P56545 445 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 CLCA4Q14CN2 919 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 SSX6Q7RTT6 188 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 TIGD4Q8IY51 512 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 ZDHHC1Q8WTX9 485 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 TFAP2CQ92754 450 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 ARRDC3Q96B67 414 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 ACTRT3Q9BYD9 372 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 GRHPRQ9UBQ7 328 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 SOBPA7XYQ1 873 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 SOX9P48436 509 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 FNTBP49356 437 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 COL9A2Q14055 689 aaPredicted RBP16.32■□□□□ 0.2
PHRF1-206ENST00000534320 FIGNL1Q6PIW4 674 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 C17orf113A0A1B0GUU1 675 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 A8MV72 311 aaPredicted RBP16.32■□□□□ 0.2
PHRF1-206ENST00000534320 ZNF217O75362 1048 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 HOXD12P35452 270 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 SELPLGQ14242 412 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.32■□□□□ 0.27e-12■■□□□ 12.7
PHRF1-206ENST00000534320 TMEM236Q5W0B7 351 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 GATSQ8NAP1 163 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 PSD4Q8NDX1 1056 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 ASB15Q8WXK1 588 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 PHB2Q99623 299 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 PELOQ9BRX2 385 aaKnown RBP16.32■□□□□ 0.2
PHRF1-206ENST00000534320 EBF1Q9UH73 591 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 ZNF831Q5JPB2 1677 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 TFPTP0C1Z6 253 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 GCGRP47871 477 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 DNM1P34Q6PK57 102 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 UGT2A3Q6UWM9 527 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 ZNF761Q86XN6 746 aaPredicted RBP16.32■□□□□ 0.2
PHRF1-206ENST00000534320 HS3ST5Q8IZT8 346 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 OR4K5Q8NGD3 323 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 OR5T3Q8NGG3 340 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 OR51A7Q8NH64 312 aa16.32■□□□□ 0.2
PHRF1-206ENST00000534320 LOC100509620A0A075B734 347 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms