RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 ZNF628Q5EBL2 1059 aa14.12□□□□□ -0.15
CPSF1-211ENST00000533492 FNDC7Q5VTL7 733 aa14.12□□□□□ -0.15
CPSF1-211ENST00000533492 DESI1Q6ICB0 168 aa14.12□□□□□ -0.15
CPSF1-211ENST00000533492 GALNT18Q6P9A2 607 aa14.12□□□□□ -0.15
CPSF1-211ENST00000533492 ANGPTL8Q6UXH0 198 aa14.12□□□□□ -0.15
CPSF1-211ENST00000533492 WDR53Q7Z5U6 358 aaPredicted RBP14.12□□□□□ -0.15
CPSF1-211ENST00000533492 DMRTC2Q8IXT2 367 aaPredicted RBP14.12□□□□□ -0.15
CPSF1-211ENST00000533492 PM20D2Q8IYS1 436 aa14.12□□□□□ -0.15
CPSF1-211ENST00000533492 OR9A2Q8NGT5 310 aa14.12□□□□□ -0.15
CPSF1-211ENST00000533492 HGDQ93099 445 aa14.12□□□□□ -0.15
CPSF1-211ENST00000533492 TMCO6Q96DC7 493 aa14.12□□□□□ -0.15
CPSF1-211ENST00000533492 ERP27Q96DN0 273 aa14.12□□□□□ -0.15
CPSF1-211ENST00000533492 NODALQ96S42 347 aa14.12□□□□□ -0.15
CPSF1-211ENST00000533492 TIMP4Q99727 224 aa14.12□□□□□ -0.15
CPSF1-211ENST00000533492 OSBPL11Q9BXB4 747 aa14.12□□□□□ -0.15
CPSF1-211ENST00000533492 SLC24A3Q9HC58 644 aa14.12□□□□□ -0.15
CPSF1-211ENST00000533492 ITGB1BP2Q9UKP3 347 aa14.12□□□□□ -0.15
CPSF1-211ENST00000533492 CAMK2AQ9UQM7 478 aa14.12□□□□□ -0.15
CPSF1-211ENST00000533492 GPR55Q9Y2T6 319 aaPredicted RBP14.12□□□□□ -0.15
CPSF1-211ENST00000533492 SLC6A5Q9Y345 797 aa14.12□□□□□ -0.15
CPSF1-211ENST00000533492 ARHGAP21Q5T5U3 1957 aa14.11□□□□□ -0.15
CPSF1-211ENST00000533492 EXPH5Q8NEV8 1989 aa14.11□□□□□ -0.15
CPSF1-211ENST00000533492 C2orf72A6NCS6 295 aa14.11□□□□□ -0.15
CPSF1-211ENST00000533492 TO15178 435 aa14.11□□□□□ -0.15
CPSF1-211ENST00000533492 PLIN3O60664 434 aa14.11□□□□□ -0.15
CPSF1-211ENST00000533492 ICOSLGO75144 302 aa14.11□□□□□ -0.15
CPSF1-211ENST00000533492 UGT2B11O75310 529 aa14.11□□□□□ -0.15
CPSF1-211ENST00000533492 CPA3P15088 417 aa14.11□□□□□ -0.15
CPSF1-211ENST00000533492 SOX18P35713 384 aa14.11□□□□□ -0.15
CPSF1-211ENST00000533492 DNAJB13P59910 316 aa14.11□□□□□ -0.15
CPSF1-211ENST00000533492 CRYZQ08257 329 aaKnown RBP14.11□□□□□ -0.15
CPSF1-211ENST00000533492 ZNF763Q0D2J5 394 aa14.11□□□□□ -0.15
CPSF1-211ENST00000533492 SNTA1Q13424 505 aa14.11□□□□□ -0.15
CPSF1-211ENST00000533492 SLC25A35Q3KQZ1 300 aa14.11□□□□□ -0.15
CPSF1-211ENST00000533492 EIPR1Q53HC9 387 aa14.11□□□□□ -0.15
CPSF1-211ENST00000533492 WIPI1Q5MNZ9 446 aaPredicted RBP14.11□□□□□ -0.15
CPSF1-211ENST00000533492 TMEM81Q6P7N7 255 aa14.11□□□□□ -0.15
CPSF1-211ENST00000533492 SH2D5Q6ZV89 423 aa14.11□□□□□ -0.15
CPSF1-211ENST00000533492 TDRPQ86YL5 185 aa14.11□□□□□ -0.15
CPSF1-211ENST00000533492 LIX1LQ8IVB5 337 aa14.11□□□□□ -0.15
CPSF1-211ENST00000533492 FAM9CQ8IZT9 166 aa14.11□□□□□ -0.15
CPSF1-211ENST00000533492 RDH11Q8TC12 318 aa14.11□□□□□ -0.15
CPSF1-211ENST00000533492 TMBIM1Q969X1 311 aa14.11□□□□□ -0.15
CPSF1-211ENST00000533492 COL21A1Q96P44 957 aa14.11□□□□□ -0.15
CPSF1-211ENST00000533492 ZNF559Q9BR84 538 aa14.11□□□□□ -0.15
CPSF1-211ENST00000533492 SHCBP1LQ9BZQ2 653 aa14.11□□□□□ -0.15
CPSF1-211ENST00000533492 ANKRA2Q9H9E1 313 aa14.11□□□□□ -0.15
CPSF1-211ENST00000533492 MIEF1Q9NQG6 463 aa14.11□□□□□ -0.15
CPSF1-211ENST00000533492 RRAGDQ9NQL2 400 aaPredicted RBP14.11□□□□□ -0.15
CPSF1-211ENST00000533492 SIRT5Q9NXA8 310 aa14.11□□□□□ -0.15
CPSF1-211ENST00000533492 TACC2O95359 2948 aa14.1□□□□□ -0.15
CPSF1-211ENST00000533492 PRAMEF25A6NGN4 478 aa14.1□□□□□ -0.15
CPSF1-211ENST00000533492 OR6C70A6NIJ9 312 aa14.1□□□□□ -0.15
CPSF1-211ENST00000533492 SNPHO15079 494 aa14.1□□□□□ -0.15
CPSF1-211ENST00000533492 ABCB7O75027 752 aa14.1□□□□□ -0.15
CPSF1-211ENST00000533492 ERN1O75460 977 aaKnown RBP14.1□□□□□ -0.15
CPSF1-211ENST00000533492 CBR3O75828 277 aa14.1□□□□□ -0.15
CPSF1-211ENST00000533492 EPPINO95925 133 aa14.1□□□□□ -0.15
CPSF1-211ENST00000533492 IL2RAP01589 272 aa14.1□□□□□ -0.15
CPSF1-211ENST00000533492 BMP7P18075 431 aa14.1□□□□□ -0.15
CPSF1-211ENST00000533492 KRT4P19013 534 aa14.1□□□□□ -0.15
CPSF1-211ENST00000533492 DDCP20711 480 aa14.1□□□□□ -0.15
CPSF1-211ENST00000533492 PTPN6P29350 595 aa14.1□□□□□ -0.15
CPSF1-211ENST00000533492 IL12BP29460 328 aa14.1□□□□□ -0.15
CPSF1-211ENST00000533492 KRTAP10-9P60411 292 aa14.1□□□□□ -0.15
CPSF1-211ENST00000533492 MYBPHQ13203 477 aa14.1□□□□□ -0.15
CPSF1-211ENST00000533492 CES4AQ5XG92 561 aa14.1□□□□□ -0.15
CPSF1-211ENST00000533492 VASNQ6EMK4 673 aa14.1□□□□□ -0.15
CPSF1-211ENST00000533492 FRMD7Q6ZUT3 714 aa14.1□□□□□ -0.15
CPSF1-211ENST00000533492 YRDCQ86U90 279 aaKnown RBP14.1□□□□□ -0.15
CPSF1-211ENST00000533492 FAM83FQ8NEG4 500 aaPredicted RBP14.1□□□□□ -0.15
CPSF1-211ENST00000533492 EPS8L3Q8TE67 593 aaKnown RBP14.1□□□□□ -0.15
CPSF1-211ENST00000533492 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.1□□□□□ -0.15
CPSF1-211ENST00000533492 ABTB1Q969K4 478 aaPredicted RBP14.1□□□□□ -0.15
CPSF1-211ENST00000533492 C11orf24Q96F05 449 aaPredicted RBP14.1□□□□□ -0.15
CPSF1-211ENST00000533492 ADOQ96SZ5 270 aa14.1□□□□□ -0.15
CPSF1-211ENST00000533492 STMN4Q9H169 189 aaPredicted RBP14.1□□□□□ -0.15
CPSF1-211ENST00000533492 GALNT9Q9HCQ5 603 aa14.1□□□□□ -0.15
CPSF1-211ENST00000533492 OXSMQ9NWU1 459 aa14.1□□□□□ -0.15
CPSF1-211ENST00000533492 TAS2R9Q9NYW1 312 aa14.1□□□□□ -0.15
CPSF1-211ENST00000533492 KCNN3Q9UGI6 736 aa14.1□□□□□ -0.15
CPSF1-211ENST00000533492 MID2Q9UJV3 735 aa14.1□□□□□ -0.15
CPSF1-211ENST00000533492 MAPRE3Q9UPY8 281 aa14.1□□□□□ -0.15
CPSF1-211ENST00000533492 EXO1Q9UQ84 846 aaKnown RBP14.1□□□□□ -0.15
CPSF1-211ENST00000533492 PDZD2O15018 2839 aa14.1□□□□□ -0.15
CPSF1-211ENST00000533492 CSMD1Q96PZ7 3565 aa14.1□□□□□ -0.15
CPSF1-211ENST00000533492 TLDC2A0PJX2 215 aa14.09□□□□□ -0.15
CPSF1-211ENST00000533492 DVL2O14641 736 aa14.09□□□□□ -0.15
CPSF1-211ENST00000533492 PLOD3O60568 738 aa14.09□□□□□ -0.15
CPSF1-211ENST00000533492 NME6O75414 186 aaPredicted RBP14.09□□□□□ -0.15
CPSF1-211ENST00000533492 CT45A8P0DMV1 189 aa14.09□□□□□ -0.15
CPSF1-211ENST00000533492 CT45A9P0DMV2 189 aa14.09□□□□□ -0.15
CPSF1-211ENST00000533492 UROSP10746 265 aa14.09□□□□□ -0.15
CPSF1-211ENST00000533492 PTGDSP41222 190 aa14.09□□□□□ -0.15
CPSF1-211ENST00000533492 NCBP2P52298 156 aaKnown RBP eCLIP14.09□□□□□ -0.15
CPSF1-211ENST00000533492 CORO7P57737 925 aa14.09□□□□□ -0.15
CPSF1-211ENST00000533492 PSPHP78330 225 aa14.09□□□□□ -0.15
CPSF1-211ENST00000533492 EFR3AQ14156 821 aa14.09□□□□□ -0.15
CPSF1-211ENST00000533492 CEBPEQ15744 281 aa14.09□□□□□ -0.15
CPSF1-211ENST00000533492 ACSF3Q4G176 576 aaPredicted RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms