RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 ZFP28Q8NHY6 868 aa18.8■□□□□ 0.6
CCS-208ENST00000533244 SPPL2AQ8TCT8 520 aa18.8■□□□□ 0.6
CCS-208ENST00000533244 PPP1R36Q96LQ0 422 aa18.8■□□□□ 0.6
CCS-208ENST00000533244 TTTY12Q9BZ98 90 aa18.8■□□□□ 0.6
CCS-208ENST00000533244 PLSCR2Q9NRY7 297 aa18.8■□□□□ 0.6
CCS-208ENST00000533244 OSGIN2Q9Y236 505 aa18.8■□□□□ 0.6
CCS-208ENST00000533244 PTPN13Q12923 2485 aa18.8■□□□□ 0.6
CCS-208ENST00000533244 HMGB1P1B2RPK0 211 aaPredicted RBP18.79■□□□□ 0.6
CCS-208ENST00000533244 TP53I11O14683 189 aa18.79■□□□□ 0.6
CCS-208ENST00000533244 TFECO14948 347 aaPredicted RBP18.79■□□□□ 0.6
CCS-208ENST00000533244 HS6ST1O60243 411 aa18.79■□□□□ 0.6
CCS-208ENST00000533244 NME6O75414 186 aaPredicted RBP18.79■□□□□ 0.6
CCS-208ENST00000533244 ERN1O75460 977 aaKnown RBP18.79■□□□□ 0.6
CCS-208ENST00000533244 ABCB1P08183 1280 aaPredicted RBP18.79■□□□□ 0.6
CCS-208ENST00000533244 PRPS1L1P21108 318 aa18.79■□□□□ 0.6
CCS-208ENST00000533244 CORO7P57737 925 aa18.79■□□□□ 0.6
CCS-208ENST00000533244 PSPHP78330 225 aa18.79■□□□□ 0.6
CCS-208ENST00000533244 TBCELQ5QJ74 424 aa18.79■□□□□ 0.6
CCS-208ENST00000533244 PRAMEF20Q5VT98 475 aa18.79■□□□□ 0.6
CCS-208ENST00000533244 TMEM81Q6P7N7 255 aa18.79■□□□□ 0.6
CCS-208ENST00000533244 RGS9BPQ6ZS82 235 aa18.79■□□□□ 0.6
CCS-208ENST00000533244 LARP4Q71RC2 724 aaKnown RBP eCLIP18.79■□□□□ 0.62e-6■□□□□ 9.8
CCS-208ENST00000533244 SLC34A3Q8N130 599 aa18.79■□□□□ 0.6
CCS-208ENST00000533244 OR7A2PQ8NGA2 310 aa18.79■□□□□ 0.6
CCS-208ENST00000533244 HGDQ93099 445 aa18.79■□□□□ 0.6
CCS-208ENST00000533244 COQ8BQ96D53 544 aa18.79■□□□□ 0.6
CCS-208ENST00000533244 OMA1Q96E52 524 aa18.79■□□□□ 0.6
CCS-208ENST00000533244 ZDHHC11Q9H8X9 412 aa18.79■□□□□ 0.6
CCS-208ENST00000533244 IL1RL2Q9HB29 575 aa18.79■□□□□ 0.6
CCS-208ENST00000533244 ASH1LQ9NR48 2969 aaKnown RBP18.79■□□□□ 0.6
CCS-208ENST00000533244 DDX18Q9NVP1 670 aaKnown RBP18.79■□□□□ 0.6
CCS-208ENST00000533244 TUBA8Q9NY65 449 aaPredicted RBP18.79■□□□□ 0.6
CCS-208ENST00000533244 NTMQ9P121 344 aa18.79■□□□□ 0.6
CCS-208ENST00000533244 ZNF835Q9Y2P0 537 aa18.79■□□□□ 0.6
CCS-208ENST00000533244 SDHDO14521 159 aa18.78■□□□□ 0.6
CCS-208ENST00000533244 HDAC3O15379 428 aa18.78■□□□□ 0.6
CCS-208ENST00000533244 LAMP1P11279 417 aa18.78■□□□□ 0.6
CCS-208ENST00000533244 CDK9P50750 372 aaKnown RBP18.78■□□□□ 0.6
CCS-208ENST00000533244 DIO3P55073 304 aa18.78■□□□□ 0.6
CCS-208ENST00000533244 CLDN8P56748 225 aa18.78■□□□□ 0.6
CCS-208ENST00000533244 PSG6Q00889 435 aa18.78■□□□□ 0.6
CCS-208ENST00000533244 PLCXD2Q0VAA5 305 aa18.78■□□□□ 0.6
CCS-208ENST00000533244 HSPB3Q12988 150 aa18.78■□□□□ 0.6
CCS-208ENST00000533244 OGFOD2Q6N063 350 aa18.78■□□□□ 0.6
CCS-208ENST00000533244 CAMKMTQ7Z624 323 aa18.78■□□□□ 0.6
CCS-208ENST00000533244 GHDCQ8N2G8 530 aa18.78■□□□□ 0.6
CCS-208ENST00000533244 KRTCAP2Q8N6L1 136 aa18.78■□□□□ 0.6
CCS-208ENST00000533244 OR5M3Q8NGP4 307 aa18.78■□□□□ 0.6
CCS-208ENST00000533244 ZNF75CPQ92670 426 aaPredicted RBP18.78■□□□□ 0.6
CCS-208ENST00000533244 HOXB13Q92826 284 aaPredicted RBP18.78■□□□□ 0.6
CCS-208ENST00000533244 ERRFI1Q9UJM3 462 aaPredicted RBP18.78■□□□□ 0.6
CCS-208ENST00000533244 SLC5A6Q9Y289 635 aa18.78■□□□□ 0.6
CCS-208ENST00000533244 DOPEY1Q5JWR5 2465 aa18.77■□□□□ 0.6
CCS-208ENST00000533244 LRRC3CA6NJW4 275 aa18.77■□□□□ 0.6
CCS-208ENST00000533244 SLCO1B7G3V0H7 640 aa18.77■□□□□ 0.6
CCS-208ENST00000533244 ACOT7O00154 380 aa18.77■□□□□ 0.6
CCS-208ENST00000533244 LBPP18428 481 aa18.77■□□□□ 0.6
CCS-208ENST00000533244 MANFP55145 182 aaKnown RBP18.77■□□□□ 0.6
CCS-208ENST00000533244 PPIAP62937 165 aaKnown RBP18.77■□□□□ 0.6
CCS-208ENST00000533244 RBPJQ06330 500 aa18.77■□□□□ 0.6
CCS-208ENST00000533244 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.77■□□□□ 0.6
CCS-208ENST00000533244 C4orf17Q53FE4 359 aa18.77■□□□□ 0.6
CCS-208ENST00000533244 Q6ZPB1 254 aaPredicted RBP18.77■□□□□ 0.6
CCS-208ENST00000533244 NUP54Q7Z3B4 507 aa18.77■□□□□ 0.6
CCS-208ENST00000533244 FGD2Q7Z6J4 655 aa18.77■□□□□ 0.6
CCS-208ENST00000533244 SLC22A16Q86VW1 577 aa18.77■□□□□ 0.6
CCS-208ENST00000533244 NATD1Q8N6N6 113 aa18.77■□□□□ 0.6
CCS-208ENST00000533244 GOLGA6L1Q8N7Z2 621 aa18.77■□□□□ 0.6
CCS-208ENST00000533244 OR52N2Q8NGI0 321 aa18.77■□□□□ 0.6
CCS-208ENST00000533244 NUDT8Q8WV74 236 aa18.77■□□□□ 0.6
CCS-208ENST00000533244 DIO2Q92813 273 aa18.77■□□□□ 0.6
CCS-208ENST00000533244 SLC35A4Q96G79 324 aa18.77■□□□□ 0.6
CCS-208ENST00000533244 ANGPTL4Q9BY76 406 aa18.77■□□□□ 0.6
CCS-208ENST00000533244 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.77■□□□□ 0.6
CCS-208ENST00000533244 COL12A1Q99715 3063 aa18.77■□□□□ 0.6
CCS-208ENST00000533244 USP9YO00507 2555 aaPredicted RBP18.77■□□□□ 0.59
CCS-208ENST00000533244 DOPEY2Q9Y3R5 2298 aa18.76■□□□□ 0.59
CCS-208ENST00000533244 OR6C70A6NIJ9 312 aa18.76■□□□□ 0.59
CCS-208ENST00000533244 TSPAN2O60636 221 aa18.76■□□□□ 0.59
CCS-208ENST00000533244 UGT2B11O75310 529 aa18.76■□□□□ 0.59
CCS-208ENST00000533244 TRIM3O75382 744 aaPredicted RBP18.76■□□□□ 0.59
CCS-208ENST00000533244 AGFG2O95081 481 aa18.76■□□□□ 0.59
CCS-208ENST00000533244 MAP3K8P41279 467 aa18.76■□□□□ 0.59
CCS-208ENST00000533244 CASP3P42574 277 aa18.76■□□□□ 0.59
CCS-208ENST00000533244 KCNJ2P63252 427 aa18.76■□□□□ 0.59
CCS-208ENST00000533244 RPP38P78345 283 aaKnown RBP18.76■□□□□ 0.59
CCS-208ENST00000533244 PLGLB1Q02325 96 aa18.76■□□□□ 0.59
CCS-208ENST00000533244 ZNF155Q12901 538 aaPredicted RBP18.76■□□□□ 0.59
CCS-208ENST00000533244 CPTPQ5TA50 214 aa18.76■□□□□ 0.59
CCS-208ENST00000533244 WDR75Q8IWA0 830 aaKnown RBP18.76■□□□□ 0.59
CCS-208ENST00000533244 TMEM251Q8N6I4 163 aa18.76■□□□□ 0.59
CCS-208ENST00000533244 PSMA8Q8TAA3 256 aa18.76■□□□□ 0.59
CCS-208ENST00000533244 TMBIM1Q969X1 311 aa18.76■□□□□ 0.59
CCS-208ENST00000533244 RELTQ969Z4 430 aa18.76■□□□□ 0.59
CCS-208ENST00000533244 LMF2Q9BU23 707 aaKnown RBP18.76■□□□□ 0.59
CCS-208ENST00000533244 ZFP64Q9NPA5 681 aa18.76■□□□□ 0.59
CCS-208ENST00000533244 SIRT3Q9NTG7 399 aaPredicted RBP18.76■□□□□ 0.59
CCS-208ENST00000533244 ATAD3AQ9NVI7 634 aa18.76■□□□□ 0.59
CCS-208ENST00000533244 MARCOQ9UEW3 520 aaPredicted RBP18.76■□□□□ 0.59
CCS-208ENST00000533244 MAPRE3Q9UPY8 281 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms