RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 DNAAF1Q8NEP3 725 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 CD200R1Q8TD46 325 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 SRA1Q9HD15 236 aaKnown RBP14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 RXFP3Q9NSD7 469 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 IL17CQ9P0M4 197 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 ALG5Q9Y673 324 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 MELKQ14680 651 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 ZNF367Q7RTV3 350 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 IRF2BPLQ9H1B7 796 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 MTMR10Q9NXD2 777 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 ACTR10Q9NZ32 417 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 GRXCR2A6NFK2 248 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 H0YAE9 185 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 SLC19A2O60779 497 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 SNAPC5O75971 98 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 CELP19835 753 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 EXOC3L2Q2M3D2 409 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 ZNF829Q3KNS6 432 aaPredicted RBP14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 NDUFAF5Q5TEU4 345 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 LRFN4Q6PJG9 635 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 CITED4Q96RK1 184 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 PCTPQ9UKL6 214 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 hCG_1807616A0A1W2PRN6 198 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 PRSS38A1L453 326 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 CCRL2O00421 344 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 SOCS2O14508 198 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 ZNF43P17038 809 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 STOMP27105 288 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 IRS1P35568 1242 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 CCSAPQ6IQ19 270 aaPredicted RBP14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 PDZD3Q86UT5 571 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 PIANPQ8IYJ0 282 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 SECISBP2Q96T21 854 aaKnown RBP14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 PITX2Q99697 317 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 SOX17Q9H6I2 414 aaPredicted RBP14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 CDH20Q9HBT6 801 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 MYNNQ9NPC7 610 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 ADAMTS6Q9UKP5 1117 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 ZNF28P17035 718 aa14.02□□□□□ -0.16
PCDHA9-202ENST00000532602 CD6P30203 668 aa14.02□□□□□ -0.16
PCDHA9-202ENST00000532602 MAGEA2P43356 314 aa14.02□□□□□ -0.16
PCDHA9-202ENST00000532602 ZNF404Q494X3 552 aa14.02□□□□□ -0.16
PCDHA9-202ENST00000532602 BEND4Q6ZU67 534 aa14.02□□□□□ -0.16
PCDHA9-202ENST00000532602 COMMD6Q7Z4G1 85 aa14.02□□□□□ -0.16
PCDHA9-202ENST00000532602 CLEC1AQ8NC01 280 aa14.02□□□□□ -0.16
PCDHA9-202ENST00000532602 ABHD5Q8WTS1 349 aa14.02□□□□□ -0.16
PCDHA9-202ENST00000532602 HDAC2Q92769 488 aaKnown RBP14.02□□□□□ -0.16
PCDHA9-202ENST00000532602 ECHDC3Q96DC8 303 aa14.02□□□□□ -0.16
PCDHA9-202ENST00000532602 NECAB3Q96P71 396 aaPredicted RBP14.02□□□□□ -0.16
PCDHA9-202ENST00000532602 INPP5KQ9BT40 448 aa14.02□□□□□ -0.16
PCDHA9-202ENST00000532602 CSNK1G1Q9HCP0 422 aa14.02□□□□□ -0.16
PCDHA9-202ENST00000532602 SLC6A8P48029 635 aa14.02□□□□□ -0.16
PCDHA9-202ENST00000532602 ARHGAP19Q14CB8 494 aa14.02□□□□□ -0.16
PCDHA9-202ENST00000532602 LCTLQ6UWM7 567 aa14.02□□□□□ -0.16
PCDHA9-202ENST00000532602 TEX26Q8N6G2 289 aa14.02□□□□□ -0.16
PCDHA9-202ENST00000532602 OR52N2Q8NGI0 321 aa14.02□□□□□ -0.16
PCDHA9-202ENST00000532602 TAMM41Q96BW9 452 aa14.02□□□□□ -0.16
PCDHA9-202ENST00000532602 CCDC120Q96HB5 630 aa14.02□□□□□ -0.16
PCDHA9-202ENST00000532602 ZNF224Q9NZL3 707 aa14.02□□□□□ -0.16
PCDHA9-202ENST00000532602 FARSAQ9Y285 508 aaKnown RBP14.02□□□□□ -0.16
PCDHA9-202ENST00000532602 IGHEP01854 428 aa14.02□□□□□ -0.17
PCDHA9-202ENST00000532602 ETFAP13804 333 aa14.02□□□□□ -0.17
PCDHA9-202ENST00000532602 TNFRSF1BP20333 461 aa14.02□□□□□ -0.17
PCDHA9-202ENST00000532602 PSMB5P28074 263 aa14.02□□□□□ -0.17
PCDHA9-202ENST00000532602 CTSCP53634 463 aa14.02□□□□□ -0.17
PCDHA9-202ENST00000532602 MGAT3Q09327 533 aa14.02□□□□□ -0.17
PCDHA9-202ENST00000532602 PTCRAQ6ISU1 281 aaPredicted RBP14.02□□□□□ -0.17
PCDHA9-202ENST00000532602 LETMD1Q6P1Q0 360 aa14.02□□□□□ -0.17
PCDHA9-202ENST00000532602 RTN4RL1Q86UN2 441 aaPredicted RBP14.02□□□□□ -0.17
PCDHA9-202ENST00000532602 FOXRED2Q8IWF2 684 aa14.02□□□□□ -0.17
PCDHA9-202ENST00000532602 UEVLDQ8IX04 471 aa14.02□□□□□ -0.17
PCDHA9-202ENST00000532602 TIGD4Q8IY51 512 aa14.02□□□□□ -0.17
PCDHA9-202ENST00000532602 GOLM1Q8NBJ4 401 aa14.02□□□□□ -0.17
PCDHA9-202ENST00000532602 DENND6BQ8NEG7 585 aa14.02□□□□□ -0.17
PCDHA9-202ENST00000532602 OR52E1Q8NGJ3 308 aa14.02□□□□□ -0.17
PCDHA9-202ENST00000532602 SFXN2Q96NB2 322 aa14.02□□□□□ -0.17
PCDHA9-202ENST00000532602 ENAMQ9NRM1 1142 aa14.02□□□□□ -0.17
PCDHA9-202ENST00000532602 SACM1LQ9NTJ5 587 aa14.02□□□□□ -0.17
PCDHA9-202ENST00000532602 TMA7Q9Y2S6 64 aaKnown RBP14.02□□□□□ -0.17
PCDHA9-202ENST00000532602 LOC100509620A0A075B734 347 aa14.02□□□□□ -0.17
PCDHA9-202ENST00000532602 LINC01553A4QN01 128 aa14.02□□□□□ -0.17
PCDHA9-202ENST00000532602 ANHXE9PGG2 379 aa14.02□□□□□ -0.17
PCDHA9-202ENST00000532602 ELK4P28324 431 aa14.02□□□□□ -0.17
PCDHA9-202ENST00000532602 HACD2Q6Y1H2 254 aa14.02□□□□□ -0.17
PCDHA9-202ENST00000532602 SPRYD4Q8WW59 207 aaPredicted RBP14.02□□□□□ -0.17
PCDHA9-202ENST00000532602 MS4A4EQ96PG1 132 aa14.02□□□□□ -0.17
PCDHA9-202ENST00000532602 DLGAP1O14490 977 aa14.02□□□□□ -0.17
PCDHA9-202ENST00000532602 C7P10643 843 aa14.02□□□□□ -0.17
PCDHA9-202ENST00000532602 CRISP1P54107 249 aa14.02□□□□□ -0.17
PCDHA9-202ENST00000532602 EFR3AQ14156 821 aa14.02□□□□□ -0.17
PCDHA9-202ENST00000532602 ENPP6Q6UWR7 440 aa14.02□□□□□ -0.17
PCDHA9-202ENST00000532602 ZNF551Q7Z340 670 aaPredicted RBP14.02□□□□□ -0.17
PCDHA9-202ENST00000532602 MINDY1Q8N5J2 469 aa14.02□□□□□ -0.17
PCDHA9-202ENST00000532602 DTD2Q96FN9 168 aa14.02□□□□□ -0.17
PCDHA9-202ENST00000532602 ALOXE3Q9BYJ1 711 aa14.02□□□□□ -0.17
PCDHA9-202ENST00000532602 AP1M2Q9Y6Q5 423 aa14.02□□□□□ -0.17
PCDHA9-202ENST00000532602 SCN7AQ01118 1682 aa14.02□□□□□ -0.17
PCDHA9-202ENST00000532602 CDK5RAP2Q96SN8 1893 aa14.02□□□□□ -0.17
PCDHA9-202ENST00000532602 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 TRAPPC13A5PLN9 417 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms