RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 GOT2P00505 430 aaKnown RBP3.7□□□□□ -1.82
C11orf88-204ENST00000529661 SLC35G4P0C7Q5 338 aa3.7□□□□□ -1.82
C11orf88-204ENST00000529661 AXLP30530 894 aa3.7□□□□□ -1.82
C11orf88-204ENST00000529661 ADRA1AP35348 466 aa3.7□□□□□ -1.82
C11orf88-204ENST00000529661 ARFIP1P53367 373 aa3.7□□□□□ -1.82
C11orf88-204ENST00000529661 MRPS6P82932 125 aaKnown RBP3.7□□□□□ -1.82
C11orf88-204ENST00000529661 CD226Q15762 336 aa3.7□□□□□ -1.82
C11orf88-204ENST00000529661 ANKRD55Q3KP44 614 aa3.7□□□□□ -1.82
C11orf88-204ENST00000529661 CEP55Q53EZ4 464 aa3.7□□□□□ -1.82
C11orf88-204ENST00000529661 FAM182AQ5T1J6 154 aa3.7□□□□□ -1.82
C11orf88-204ENST00000529661 RIPPLY2Q5TAB7 128 aa3.7□□□□□ -1.82
C11orf88-204ENST00000529661 AGAP7PQ5VUJ5 663 aa3.7□□□□□ -1.82
C11orf88-204ENST00000529661 PAQR6Q6TCH4 344 aa3.7□□□□□ -1.82
C11orf88-204ENST00000529661 CCDC73Q6ZRK6 1079 aa3.7□□□□□ -1.82
C11orf88-204ENST00000529661 LUZP1Q86V48 1076 aa3.7□□□□□ -1.82
C11orf88-204ENST00000529661 MISPQ8IVT2 679 aa3.7□□□□□ -1.82
C11orf88-204ENST00000529661 ARFGAP2Q8N6H7 521 aa3.7□□□□□ -1.82
C11orf88-204ENST00000529661 SAMD12Q8N8I0 201 aa3.7□□□□□ -1.82
C11orf88-204ENST00000529661 NFAM1Q8NET5 270 aaPredicted RBP3.7□□□□□ -1.82
C11orf88-204ENST00000529661 TXN2Q99757 166 aa3.7□□□□□ -1.82
C11orf88-204ENST00000529661 ST6GALNAC5Q9BVH7 336 aa3.7□□□□□ -1.82
C11orf88-204ENST00000529661 GPR174Q9BXC1 333 aa3.7□□□□□ -1.82
C11orf88-204ENST00000529661 MRPL13Q9BYD1 178 aaKnown RBP3.7□□□□□ -1.82
C11orf88-204ENST00000529661 TUBB1Q9H4B7 451 aa3.7□□□□□ -1.82
C11orf88-204ENST00000529661 COG4Q9H9E3 785 aa3.7□□□□□ -1.82
C11orf88-204ENST00000529661 GPR83Q9NYM4 423 aa3.7□□□□□ -1.82
C11orf88-204ENST00000529661 EIF3KQ9UBQ5 218 aaKnown RBP3.7□□□□□ -1.82
C11orf88-204ENST00000529661 CIDEBQ9UHD4 219 aa3.7□□□□□ -1.82
C11orf88-204ENST00000529661 PURGQ9UJV8 347 aaKnown RBP3.7□□□□□ -1.82
C11orf88-204ENST00000529661 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.7□□□□□ -1.82
C11orf88-204ENST00000529661 FBXO7Q9Y3I1 522 aa3.7□□□□□ -1.82
C11orf88-204ENST00000529661 MFHAS1Q9Y4C4 1052 aa3.7□□□□□ -1.82
C11orf88-204ENST00000529661 RNF115Q9Y4L5 304 aa3.7□□□□□ -1.82
C11orf88-204ENST00000529661 CLRN2A0PK11 232 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 A8MXK9 166 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 PDHXO00330 501 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 MCF2LO15068 1137 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 ANGPT2O15123 496 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 PI15O43692 258 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 SNX4O95219 450 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 SFTPCP11686 197 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 ACADSP16219 412 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 SAA4P35542 130 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 RIDAP52758 137 aaKnown RBP3.69□□□□□ -1.82
C11orf88-204ENST00000529661 RAG2P55895 527 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 SLC8A3P57103 927 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 PPIAP62937 165 aaKnown RBP3.69□□□□□ -1.82
C11orf88-204ENST00000529661 TRA2BP62995 288 aaKnown RBP3.69□□□□□ -1.82
C11orf88-204ENST00000529661 CCL14Q16627 93 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 GLIPR1L2Q4G1C9 344 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 TAF3Q5VWG9 929 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 KRTAP5-1Q6L8H4 278 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 LEG1Q6P5S2 330 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 MOB2Q70IA6 237 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 LHFPL4Q7Z7J7 247 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 P2RY8Q86VZ1 359 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 ZNF573Q86YE8 665 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 CBWD2Q8IUF1 395 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 GCNT2Q8N0V5 402 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 NPRL2Q8WTW4 380 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 PINX1Q96BK5 328 aaKnown RBP3.69□□□□□ -1.82
C11orf88-204ENST00000529661 DTNBP1Q96EV8 351 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 TESK2Q96S53 571 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 CCDC28BQ9BUN5 200 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 LRRC61Q9BV99 259 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 CARD6Q9BX69 1037 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 OCR1Q9BZK8 76 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 LRRCC1Q9C099 1032 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 IL1RL2Q9HB29 575 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 RPS10P5Q9NQ39 176 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 TRPV5Q9NQA5 729 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 GDAP2Q9NXN4 497 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 TMOD2Q9NZR1 351 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 CTSZQ9UBR2 303 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 LAMP5Q9UJQ1 280 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 FZR1Q9UM11 496 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 HPCAL4Q9UM19 191 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 CHMP2BQ9UQN3 213 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 AUP1Q9Y679 476 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.69□□□□□ -1.82
C11orf88-204ENST00000529661 CACNA1FO60840 1977 aa3.69□□□□□ -1.82
C11orf88-204ENST00000529661 IGHV3OR16-10A0A075B7F0 116 aa3.68□□□□□ -1.82
C11orf88-204ENST00000529661 A0A0J9YVX5 310 aa3.68□□□□□ -1.82
C11orf88-204ENST00000529661 NPIPA2E9PIF3 369 aa3.68□□□□□ -1.82
C11orf88-204ENST00000529661 OR4F21O95013 312 aa3.68□□□□□ -1.82
C11orf88-204ENST00000529661 POP4O95707 220 aaKnown RBP3.68□□□□□ -1.82
C11orf88-204ENST00000529661 SEMA4FO95754 770 aa3.68□□□□□ -1.82
C11orf88-204ENST00000529661 KRT8P05787 483 aa3.68□□□□□ -1.82
C11orf88-204ENST00000529661 CA3P07451 260 aa3.68□□□□□ -1.82
C11orf88-204ENST00000529661 HCKP08631 526 aa3.68□□□□□ -1.82
C11orf88-204ENST00000529661 HOXB7P09629 217 aa3.68□□□□□ -1.82
C11orf88-204ENST00000529661 OR9G9P0C7N8 305 aa3.68□□□□□ -1.82
C11orf88-204ENST00000529661 HSPA5P11021 654 aaKnown RBP3.68□□□□□ -1.82
C11orf88-204ENST00000529661 GATA1P15976 413 aaPredicted RBP3.68□□□□□ -1.82
C11orf88-204ENST00000529661 PAICSP22234 425 aaKnown RBP3.68□□□□□ -1.82
C11orf88-204ENST00000529661 SLC1A4P43007 532 aa3.68□□□□□ -1.82
C11orf88-204ENST00000529661 TRPC1P48995 793 aa3.68□□□□□ -1.82
C11orf88-204ENST00000529661 HNMTP50135 292 aa3.68□□□□□ -1.82
C11orf88-204ENST00000529661 VCPP55072 806 aaKnown RBP3.68□□□□□ -1.82
C11orf88-204ENST00000529661 MS4A2Q01362 244 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms